RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
CIITA-214ENST00000636238 VSIG10Q8N0Z9 540 aa10.05□□□□□ -0.8
CIITA-214ENST00000636238 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
CIITA-214ENST00000636238 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
CIITA-214ENST00000636238 H0YIN7 160 aa10.04□□□□□ -0.8
CIITA-214ENST00000636238 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
CIITA-214ENST00000636238 CAPN15O75808 1086 aa10.04□□□□□ -0.8
CIITA-214ENST00000636238 SOGA3Q5TF21 947 aa10.04□□□□□ -0.8
CIITA-214ENST00000636238 SRP68Q9UHB9 627 aaKnown RBP10.04□□□□□ -0.8
CIITA-214ENST00000636238 N4BP2Q86UW6 1770 aaPredicted RBP10.03□□□□□ -0.8
CIITA-214ENST00000636238 PCNTO95613 3336 aa10.03□□□□□ -0.8
CIITA-214ENST00000636238 A0A087WZG4 1122 aa10.03□□□□□ -0.8
CIITA-214ENST00000636238 NFIXQ14938 502 aa10.03□□□□□ -0.8
CIITA-214ENST00000636238 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
CIITA-214ENST00000636238 NFATC2IPQ8NCF5 419 aa10.03□□□□□ -0.8
CIITA-214ENST00000636238 POLR3GLQ9BT43 218 aa10.03□□□□□ -0.8
CIITA-214ENST00000636238 IQCA1LA6NCM1 817 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 NFKBIEO00221 500 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 SERPINB2P05120 415 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 CYP19A1P11511 503 aaPredicted RBP10.02□□□□□ -0.81
CIITA-214ENST00000636238 PDE6BP35913 854 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 RASSF7Q02833 373 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 AKAP4Q5JQC9 854 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 USPL1Q5W0Q7 1092 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 MIER1Q8N108 512 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 SLC52A2Q9HAB3 445 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.81
CIITA-214ENST00000636238 COL15A1P39059 1388 aa10.01□□□□□ -0.81
CIITA-214ENST00000636238 SLC34A2O95436 690 aa10.01□□□□□ -0.81
CIITA-214ENST00000636238 CTCFP49711 727 aaPredicted RBP10.01□□□□□ -0.81
CIITA-214ENST00000636238 C2CD5Q86YS7 1000 aa10.01□□□□□ -0.81
CIITA-214ENST00000636238 BRIP1Q9BX63 1249 aa10.01□□□□□ -0.81
CIITA-214ENST00000636238 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
CIITA-214ENST00000636238 MRC1P22897 1456 aa10□□□□□ -0.81
CIITA-214ENST00000636238 POTECB2RU33 542 aa10□□□□□ -0.81
CIITA-214ENST00000636238 DNAJC10Q8IXB1 793 aa10□□□□□ -0.81
CIITA-214ENST00000636238 AIDAQ96BJ3 306 aa10□□□□□ -0.81
CIITA-214ENST00000636238 L3MBTL3Q96JM7 780 aaPredicted RBP10□□□□□ -0.81
CIITA-214ENST00000636238 STARD3NLO95772 234 aa9.99□□□□□ -0.81
CIITA-214ENST00000636238 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
CIITA-214ENST00000636238 LDHDQ86WU2 507 aa9.99□□□□□ -0.81
CIITA-214ENST00000636238 CNKSR1Q969H4 720 aa9.99□□□□□ -0.81
CIITA-214ENST00000636238 TEX13AQ9BXU3 409 aaPredicted RBP9.99□□□□□ -0.81
CIITA-214ENST00000636238 TAOK3Q9H2K8 898 aa9.99□□□□□ -0.81
CIITA-214ENST00000636238 NRXN2Q9P2S2 1712 aa9.99□□□□□ -0.81
CIITA-214ENST00000636238 RGL2O15211 777 aa9.98□□□□□ -0.81
CIITA-214ENST00000636238 EIF5P55010 431 aaKnown RBP9.98□□□□□ -0.81
CIITA-214ENST00000636238 STYK1Q6J9G0 422 aa9.98□□□□□ -0.81
CIITA-214ENST00000636238 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
CIITA-214ENST00000636238 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
CIITA-214ENST00000636238 ADAMTS7Q9UKP4 1686 aa9.98□□□□□ -0.81
CIITA-214ENST00000636238 PASKQ96RG2 1323 aa9.98□□□□□ -0.81
CIITA-214ENST00000636238 CARMIL3Q8ND23 1372 aa9.98□□□□□ -0.81
CIITA-214ENST00000636238 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
CIITA-214ENST00000636238 ZBTB1Q9Y2K1 713 aa9.97□□□□□ -0.81
CIITA-214ENST00000636238 MYH14Q7Z406 1995 aaKnown RBP9.97□□□□□ -0.81
CIITA-214ENST00000636238 TJP1Q07157 1748 aa9.96□□□□□ -0.81
CIITA-214ENST00000636238 TMEM88BA6NKF7 163 aa9.96□□□□□ -0.82
CIITA-214ENST00000636238 RNMTO43148 476 aaKnown RBP9.96□□□□□ -0.82
CIITA-214ENST00000636238 IL13P35225 146 aa9.96□□□□□ -0.82
CIITA-214ENST00000636238 TNNT2P45379 298 aaPredicted RBP9.96□□□□□ -0.82
CIITA-214ENST00000636238 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.82
CIITA-214ENST00000636238 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
CIITA-214ENST00000636238 RASSF10A6NK89 507 aa9.95□□□□□ -0.82
CIITA-214ENST00000636238 FOXN1O15353 648 aa9.95□□□□□ -0.82
CIITA-214ENST00000636238 IL6STP40189 918 aaPredicted RBP9.95□□□□□ -0.82
CIITA-214ENST00000636238 MAP2K1Q02750 393 aaPredicted RBP9.95□□□□□ -0.82
CIITA-214ENST00000636238 PNMA8AQ86V59 439 aaPredicted RBP9.95□□□□□ -0.82
CIITA-214ENST00000636238 MORC1Q86VD1 984 aa9.95□□□□□ -0.82
CIITA-214ENST00000636238 TTC5Q8N0Z6 440 aa9.95□□□□□ -0.82
CIITA-214ENST00000636238 MKRN1Q9UHC7 482 aaKnown RBP9.95□□□□□ -0.82
CIITA-214ENST00000636238 DLEC1Q9Y238 1755 aa9.95□□□□□ -0.82
CIITA-214ENST00000636238 SBF1O95248 1867 aa9.94□□□□□ -0.82
CIITA-214ENST00000636238 C21orf2O43822 256 aa9.94□□□□□ -0.82
CIITA-214ENST00000636238 ST5P78524 1137 aa9.94□□□□□ -0.82
CIITA-214ENST00000636238 PRR5LQ6MZQ0 368 aa9.94□□□□□ -0.82
CIITA-214ENST00000636238 ZNF622Q969S3 477 aaKnown RBP eCLIP9.94□□□□□ -0.82
CIITA-214ENST00000636238 MASTLQ96GX5 879 aa9.94□□□□□ -0.82
CIITA-214ENST00000636238 TAF1DQ9H5J8 278 aaPredicted RBP9.94□□□□□ -0.82
CIITA-214ENST00000636238 ITGBL1O95965 494 aaPredicted RBP9.93□□□□□ -0.82
CIITA-214ENST00000636238 SRGNP10124 158 aa9.93□□□□□ -0.82
CIITA-214ENST00000636238 CCDC93Q567U6 631 aa9.93□□□□□ -0.82
CIITA-214ENST00000636238 CLEC4GQ6UXB4 293 aa9.93□□□□□ -0.82
CIITA-214ENST00000636238 NPM2Q86SE8 214 aaKnown RBP9.93□□□□□ -0.82
CIITA-214ENST00000636238 CNBD1Q8NA66 436 aa9.93□□□□□ -0.82
CIITA-214ENST00000636238 SETDB2Q96T68 719 aa9.93□□□□□ -0.82
CIITA-214ENST00000636238 PANK3Q9H999 370 aa9.93□□□□□ -0.82
CIITA-214ENST00000636238 TIAM2Q8IVF5 1701 aa9.93□□□□□ -0.82
CIITA-214ENST00000636238 KLRG2A4D1S0 409 aaPredicted RBP9.92□□□□□ -0.82
CIITA-214ENST00000636238 DDNO94850 711 aaPredicted RBP9.92□□□□□ -0.82
CIITA-214ENST00000636238 VEGFBP49765 207 aa9.92□□□□□ -0.82
CIITA-214ENST00000636238 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
CIITA-214ENST00000636238 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
CIITA-214ENST00000636238 RTKN2Q8IZC4 609 aa9.92□□□□□ -0.82
CIITA-214ENST00000636238 LGR6Q9HBX8 967 aa9.92□□□□□ -0.82
CIITA-214ENST00000636238 HACL1Q9UJ83 578 aa9.92□□□□□ -0.82
CIITA-214ENST00000636238 KNSTRNQ9Y448 316 aa9.92□□□□□ -0.82
CIITA-214ENST00000636238 HEG1Q9ULI3 1381 aa9.91□□□□□ -0.82
CIITA-214ENST00000636238 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
CIITA-214ENST00000636238 RGS19P49795 217 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms