RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PI4KAP2A4QPH2 592 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 GNAI3P08754 354 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 BEND3Q5T5X7 828 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 LRP10Q7Z4F1 713 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 PI4KAP1Q8N8J0 262 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 BTG4Q9NY30 223 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 GNAI2P04899 355 aa15.67■□□□□ 0.1
CACNA1A-219ENST00000635917 DNAAF4Q8WXU2 420 aa15.67■□□□□ 0.1
CACNA1A-219ENST00000635917 ERVV-2B6SEH9 535 aa15.66■□□□□ 0.1
CACNA1A-219ENST00000635917 NRAPQ86VF7 1730 aa15.66■□□□□ 0.1
CACNA1A-219ENST00000635917 EVA1CP58658 441 aa15.66■□□□□ 0.1
CACNA1A-219ENST00000635917 HYPKQ9NX55 129 aa15.66■□□□□ 0.1
CACNA1A-219ENST00000635917 KCPQ6ZWJ8 1503 aa15.65■□□□□ 0.1
CACNA1A-219ENST00000635917 CABP4P57796 275 aa15.65■□□□□ 0.1
CACNA1A-219ENST00000635917 SRCIN1Q9C0H9 1055 aa15.65■□□□□ 0.1
CACNA1A-219ENST00000635917 ITGB4P16144 1822 aa15.65■□□□□ 0.1
CACNA1A-219ENST00000635917 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
CACNA1A-219ENST00000635917 IBTKQ9P2D0 1353 aaPredicted RBP15.64■□□□□ 0.1
CACNA1A-219ENST00000635917 KSR2Q6VAB6 950 aa15.64■□□□□ 0.09
CACNA1A-219ENST00000635917 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-219ENST00000635917 SNRPA1P09661 255 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-219ENST00000635917 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
CACNA1A-219ENST00000635917 BMP2KLQ5H9B9 411 aa15.64■□□□□ 0.09
CACNA1A-219ENST00000635917 FMNL2Q96PY5 1086 aa15.64■□□□□ 0.09
CACNA1A-219ENST00000635917 USP16Q9Y5T5 823 aa15.64■□□□□ 0.09
CACNA1A-219ENST00000635917 PNMA6EA0A0J9YXQ4 647 aa15.63■□□□□ 0.09
CACNA1A-219ENST00000635917 HMMRO75330 724 aa15.62■□□□□ 0.09
CACNA1A-219ENST00000635917 PLEKHM2Q8IWE5 1019 aa15.62■□□□□ 0.09
CACNA1A-219ENST00000635917 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-219ENST00000635917 TUBGCP6Q96RT7 1819 aa15.62■□□□□ 0.09
CACNA1A-219ENST00000635917 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-219ENST00000635917 TTC5Q8N0Z6 440 aa15.61■□□□□ 0.09
CACNA1A-219ENST00000635917 MAP3K2Q9Y2U5 619 aa15.61■□□□□ 0.09
CACNA1A-219ENST00000635917 LRP6O75581 1613 aa15.61■□□□□ 0.09
CACNA1A-219ENST00000635917 ALDH1L1O75891 902 aa15.61■□□□□ 0.09
CACNA1A-219ENST00000635917 UBTFL1P0CB47 393 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-219ENST00000635917 SSH3Q8TE77 659 aa15.61■□□□□ 0.09
CACNA1A-219ENST00000635917 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
CACNA1A-219ENST00000635917 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-219ENST00000635917 NWD2Q9ULI1 1742 aa15.6■□□□□ 0.09
CACNA1A-219ENST00000635917 UTYO14607 1347 aa15.6■□□□□ 0.09
CACNA1A-219ENST00000635917 POLA2Q14181 598 aa15.59■□□□□ 0.09
CACNA1A-219ENST00000635917 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-219ENST00000635917 DDX54Q8TDD1 881 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-219ENST00000635917 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
CACNA1A-219ENST00000635917 SALL3Q9BXA9 1300 aa15.58■□□□□ 0.09
CACNA1A-219ENST00000635917 TOM1O60784 492 aa15.58■□□□□ 0.08
CACNA1A-219ENST00000635917 MTX1Q13505 466 aa15.58■□□□□ 0.08
CACNA1A-219ENST00000635917 LINS1Q8NG48 757 aa15.58■□□□□ 0.08
CACNA1A-219ENST00000635917 OTUD7AQ8TE49 926 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-219ENST00000635917 NOP58Q9Y2X3 529 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-219ENST00000635917 NUP188Q5SRE5 1749 aa15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 SMARCA5O60264 1052 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 IGKV5-2P06315 115 aa15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 GSPT1P15170 499 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 TBC1D32Q96NH3 1257 aa15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 SLIT2O94813 1529 aa15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 DDX58O95786 925 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 CWF19L2Q2TBE0 894 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 COPS6Q7L5N1 327 aa15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 XAGE3Q8WTP9 111 aa15.57■□□□□ 0.08
CACNA1A-219ENST00000635917 AFDNP55196 1824 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 NBPF14Q5TI25 921 aa15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 NBPF10Q6P3W6 841 aaKnown RBP15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 PPP1R42Q7Z4L9 355 aa15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 NBPF15Q8N660 670 aa15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 OSBPL3Q9H4L5 887 aa15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 EXOC6BQ9Y2D4 811 aa15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 KAT6BQ8WYB5 2073 aa15.56■□□□□ 0.08
CACNA1A-219ENST00000635917 ATXN8OSP0DMR3 200 aa15.55■□□□□ 0.08
CACNA1A-219ENST00000635917 MYL6BP14649 208 aa15.55■□□□□ 0.08
CACNA1A-219ENST00000635917 KAZALD1Q96I82 304 aa15.55■□□□□ 0.08
CACNA1A-219ENST00000635917 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 TTC22Q5TAA0 569 aa15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 DDRGK1Q96HY6 314 aa15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 METTL22Q9BUU2 404 aaPredicted RBP15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 SPATA31A1Q5TZJ5 1347 aa15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 PIP4K2AP48426 406 aaPredicted RBP15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 ANKRD13DQ6ZTN6 518 aa15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 PIGBQ92521 554 aa15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 ZBTB47Q9UFB7 747 aaPredicted RBP15.54■□□□□ 0.08
CACNA1A-219ENST00000635917 BCL9O00512 1426 aa15.53■□□□□ 0.08
CACNA1A-219ENST00000635917 NEURL1BA8MQ27 555 aa15.53■□□□□ 0.08
CACNA1A-219ENST00000635917 GRM8O00222 908 aa15.53■□□□□ 0.08
CACNA1A-219ENST00000635917 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-219ENST00000635917 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
CACNA1A-219ENST00000635917 RIC3Q7Z5B4 369 aa15.52■□□□□ 0.08
CACNA1A-219ENST00000635917 LRRCC1Q9C099 1032 aa15.52■□□□□ 0.08
CACNA1A-219ENST00000635917 TMOD3Q9NYL9 352 aa15.52■□□□□ 0.08
CACNA1A-219ENST00000635917 THRAP3Q9Y2W1 955 aaKnown RBP15.52■□□□□ 0.08
CACNA1A-219ENST00000635917 DOT1LQ8TEK3 1739 aa15.52■□□□□ 0.08
CACNA1A-219ENST00000635917 APBB1O00213 710 aa15.52■□□□□ 0.07
CACNA1A-219ENST00000635917 PIP4K2BP78356 416 aa15.52■□□□□ 0.07
CACNA1A-219ENST00000635917 SRGAP3O43295 1099 aa15.51■□□□□ 0.07
CACNA1A-219ENST00000635917 PTCD1O75127 700 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms