RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 TRMT44Q8IYL2 757 aaKnown RBP10.61□□□□□ -0.71
SMARCA2-244ENST00000635659 GTF3C2Q8WUA4 911 aaPredicted RBP10.61□□□□□ -0.71
SMARCA2-244ENST00000635659 ANO2Q9NQ90 1003 aa10.61□□□□□ -0.71
SMARCA2-244ENST00000635659 DCTN4Q9UJW0 460 aa10.61□□□□□ -0.71
SMARCA2-244ENST00000635659 DENND4BO75064 1496 aaPredicted RBP10.61□□□□□ -0.71
SMARCA2-244ENST00000635659 PTCD1O75127 700 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-244ENST00000635659 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-244ENST00000635659 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
SMARCA2-244ENST00000635659 THSD4Q6ZMP0 1018 aa10.6□□□□□ -0.71
SMARCA2-244ENST00000635659 ASB16Q96NS5 453 aa10.6□□□□□ -0.71
SMARCA2-244ENST00000635659 CEP162Q5TB80 1403 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 ABCC1P33527 1531 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 ZFYVE16Q7Z3T8 1539 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 TCF3P15923 654 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 MAPK1P28482 360 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 FBXO33Q7Z6M2 555 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 MTRQ99707 1265 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 SEPT3Q9UH03 358 aa10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 DNMT3AQ9Y6K1 912 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-244ENST00000635659 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 MADDQ8WXG6 1647 aa10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 RAPGEF3O95398 923 aa10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 FKBP4Q02790 459 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 FKBP5Q13451 457 aaPredicted RBP10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 COL19A1Q14993 1142 aa10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 ECM1Q16610 540 aa10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 COL26A1Q96A83 441 aa10.58□□□□□ -0.72
SMARCA2-244ENST00000635659 HECW2Q9P2P5 1572 aa10.57□□□□□ -0.72
SMARCA2-244ENST00000635659 ZSCAN29Q8IWY8 852 aaPredicted RBP10.57□□□□□ -0.72
SMARCA2-244ENST00000635659 TSEN2Q8NCE0 465 aaKnown RBP10.57□□□□□ -0.72
SMARCA2-244ENST00000635659 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
SMARCA2-244ENST00000635659 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
SMARCA2-244ENST00000635659 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
SMARCA2-244ENST00000635659 MAGI2Q86UL8 1455 aa10.56□□□□□ -0.72
SMARCA2-244ENST00000635659 ABCA6Q8N139 1617 aa10.56□□□□□ -0.72
SMARCA2-244ENST00000635659 LGR5O75473 907 aa10.56□□□□□ -0.72
SMARCA2-244ENST00000635659 MYCP01106 439 aaPredicted RBP10.56□□□□□ -0.72
SMARCA2-244ENST00000635659 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
SMARCA2-244ENST00000635659 FER1L4A9Z1Z3 1794 aa10.55□□□□□ -0.72
SMARCA2-244ENST00000635659 EHBP1L1Q8N3D4 1523 aa10.55□□□□□ -0.72
SMARCA2-244ENST00000635659 RIMS1Q86UR5 1692 aaKnown RBP10.55□□□□□ -0.72
SMARCA2-244ENST00000635659 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
SMARCA2-244ENST00000635659 TIAM1Q13009 1591 aa10.55□□□□□ -0.72
SMARCA2-244ENST00000635659 DIP2CQ9Y2E4 1556 aa10.55□□□□□ -0.72
SMARCA2-244ENST00000635659 ZNF518AQ6AHZ1 1483 aa10.55□□□□□ -0.72
SMARCA2-244ENST00000635659 ARHGEF12Q9NZN5 1544 aa10.54□□□□□ -0.72
SMARCA2-244ENST00000635659 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCA2-244ENST00000635659 SCAPERQ9BY12 1400 aa10.54□□□□□ -0.72
SMARCA2-244ENST00000635659 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
SMARCA2-244ENST00000635659 KIDINS220Q9ULH0 1771 aa10.54□□□□□ -0.72
SMARCA2-244ENST00000635659 REREQ9P2R6 1566 aa10.53□□□□□ -0.72
SMARCA2-244ENST00000635659 FOXO3O43524 673 aa10.53□□□□□ -0.72
SMARCA2-244ENST00000635659 IGFBP4P22692 258 aa10.53□□□□□ -0.72
SMARCA2-244ENST00000635659 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
SMARCA2-244ENST00000635659 HELQQ8TDG4 1101 aa10.53□□□□□ -0.72
SMARCA2-244ENST00000635659 ZNF358Q9NW07 568 aa10.53□□□□□ -0.72
SMARCA2-244ENST00000635659 CDK11AQ9UQ88 783 aaPredicted RBP10.53□□□□□ -0.72
SMARCA2-244ENST00000635659 SH3BP2P78314 561 aa10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 MTMR3Q13615 1198 aa10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 PURBQ96QR8 312 aaKnown RBP10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 KCTD15Q96SI1 283 aaPredicted RBP10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 SYCP2Q9BX26 1530 aa10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 GPATCH8Q9UKJ3 1502 aaKnown RBP10.52□□□□□ -0.73
SMARCA2-244ENST00000635659 PTPRMP28827 1452 aa10.51□□□□□ -0.73
SMARCA2-244ENST00000635659 S1PR4O95977 384 aa10.51□□□□□ -0.73
SMARCA2-244ENST00000635659 NPR3P17342 541 aa10.51□□□□□ -0.73
SMARCA2-244ENST00000635659 ZNF516Q92618 1163 aa10.51□□□□□ -0.73
SMARCA2-244ENST00000635659 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
SMARCA2-244ENST00000635659 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
SMARCA2-244ENST00000635659 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
SMARCA2-244ENST00000635659 SPNS2Q8IVW8 549 aa10.5□□□□□ -0.73
SMARCA2-244ENST00000635659 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
SMARCA2-244ENST00000635659 C9orf84Q5VXU9 1444 aa10.5□□□□□ -0.73
SMARCA2-244ENST00000635659 MLH3Q9UHC1 1453 aa10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 TMEM229AB2RXF0 380 aa10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 WASLO00401 505 aaPredicted RBP10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 FAM13AO94988 1023 aa10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 SCTRP47872 440 aa10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 TAGLNQ01995 201 aaKnown RBP10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 C8orf37Q96NL8 207 aa10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 VPS8Q8N3P4 1428 aa10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 TRAPPC8Q9Y2L5 1435 aa10.49□□□□□ -0.73
SMARCA2-244ENST00000635659 RECKO95980 971 aa10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 RAB15P59190 212 aa10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 INTS6LQ5JSJ4 861 aaKnown RBP10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 EFCAB2Q5VUJ9 269 aa10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 KCTD12Q96CX2 325 aaKnown RBP10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 RBCK1Q9BYM8 510 aa10.48□□□□□ -0.73
SMARCA2-244ENST00000635659 ERVH48-1M5A8F1 160 aa10.47□□□□□ -0.73
SMARCA2-244ENST00000635659 BACH1O14867 736 aa10.47□□□□□ -0.73
SMARCA2-244ENST00000635659 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
SMARCA2-244ENST00000635659 GAS2L2Q8NHY3 880 aa10.47□□□□□ -0.73
SMARCA2-244ENST00000635659 ATP10AO60312 1499 aa10.47□□□□□ -0.73
SMARCA2-244ENST00000635659 PLXNC1O60486 1568 aa10.47□□□□□ -0.73
SMARCA2-244ENST00000635659 SCNN1DP51172 638 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms