RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	TBCEL	Q5QJ74	424 aa		10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	SLC9A9	Q8IVB4	645 aa		10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	XAGE2	Q96GT9	111 aa		10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	ASB16	Q96NS5	453 aa		10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	ARHGEF10L	Q9HCE6	1279 aa		10.83	□□□□□ -0.68
SMARCA2-238	ENST00000635273	STAG2	Q8N3U4	1231 aa		10.82	□□□□□ -0.68
SMARCA2-238	ENST00000635273	GIPC2	Q8TF65	315 aa		10.82	□□□□□ -0.68
SMARCA2-238	ENST00000635273	SAP130	Q9H0E3	1048 aa		10.82	□□□□□ -0.68
SMARCA2-238	ENST00000635273	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
SMARCA2-238	ENST00000635273	FAM13A	O94988	1023 aa		10.81	□□□□□ -0.68
SMARCA2-238	ENST00000635273	IL2RA	P01589	272 aa		10.81	□□□□□ -0.68
SMARCA2-238	ENST00000635273	C16orf46	Q6P387	395 aa		10.81	□□□□□ -0.68
SMARCA2-238	ENST00000635273	CYP4X1	Q8N118	509 aa		10.81	□□□□□ -0.68
SMARCA2-238	ENST00000635273	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.81	□□□□□ -0.68
SMARCA2-238	ENST00000635273	PKD2L1	Q9P0L9	805 aa		10.81	□□□□□ -0.68
SMARCA2-238	ENST00000635273	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.81	□□□□□ -0.68
SMARCA2-238	ENST00000635273	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.8	□□□□□ -0.68
SMARCA2-238	ENST00000635273	SENP2	Q9HC62	589 aa		10.8	□□□□□ -0.68
SMARCA2-238	ENST00000635273	SLC16A10	Q8TF71	515 aa		10.79	□□□□□ -0.68
SMARCA2-238	ENST00000635273	MRRF	Q96E11	262 aa	Known RBP	10.79	□□□□□ -0.68
SMARCA2-238	ENST00000635273	HRH3	Q9Y5N1	445 aa		10.79	□□□□□ -0.68
SMARCA2-238	ENST00000635273	CDK2AP1	O14519	115 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	ALDH1A1	P00352	501 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	ADH1A	P07327	375 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	MPST	P25325	297 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	PSMA6	P60900	246 aa	Known RBP	10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	NNT	Q13423	1086 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	KDF1	Q8NAX2	398 aa	Predicted RBP	10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	ZSCAN1	Q8NBB4	408 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	CNKSR1	Q969H4	720 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	ESYT1	Q9BSJ8	1104 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	USP3	Q9Y6I4	520 aa		10.78	□□□□□ -0.68
SMARCA2-238	ENST00000635273	TLR1	Q15399	786 aa		10.77	□□□□□ -0.69
SMARCA2-238	ENST00000635273	COX20	Q5RI15	118 aa		10.77	□□□□□ -0.69
SMARCA2-238	ENST00000635273	LCE2C	Q5TA81	110 aa		10.77	□□□□□ -0.69
SMARCA2-238	ENST00000635273	FBXO33	Q7Z6M2	555 aa		10.77	□□□□□ -0.69
SMARCA2-238	ENST00000635273	TOR4A	Q9NXH8	423 aa		10.77	□□□□□ -0.69
SMARCA2-238	ENST00000635273	CBLB	Q13191	982 aa		10.76	□□□□□ -0.69
SMARCA2-238	ENST00000635273	ZNF326	Q5BKZ1	582 aa	Known RBP	10.76	□□□□□ -0.69
SMARCA2-238	ENST00000635273	CLN3	Q13286	438 aa		10.75	□□□□□ -0.69
SMARCA2-238	ENST00000635273	POTEA	Q6S8J7	498 aa		10.75	□□□□□ -0.69
SMARCA2-238	ENST00000635273	RGL4	Q8IZJ4	473 aa		10.75	□□□□□ -0.69
SMARCA2-238	ENST00000635273	RBCK1	Q9BYM8	510 aa		10.75	□□□□□ -0.69
SMARCA2-238	ENST00000635273	QTRT2	Q9H974	415 aa	Known RBP	10.75	□□□□□ -0.69
SMARCA2-238	ENST00000635273	IGSF5	Q9NSI5	407 aa		10.75	□□□□□ -0.69
SMARCA2-238	ENST00000635273	WASF2	Q9Y6W5	498 aa		10.75	□□□□□ -0.69
SMARCA2-238	ENST00000635273	TNFRSF10B	O14763	440 aa		10.74	□□□□□ -0.69
SMARCA2-238	ENST00000635273	COL19A1	Q14993	1142 aa		10.74	□□□□□ -0.69
SMARCA2-238	ENST00000635273	STIM2	Q9P246	746 aa		10.74	□□□□□ -0.69
SMARCA2-238	ENST00000635273	CHMP3	Q9Y3E7	222 aa		10.74	□□□□□ -0.69
SMARCA2-238	ENST00000635273	TAGLN	Q01995	201 aa	Known RBP	10.73	□□□□□ -0.69
SMARCA2-238	ENST00000635273		Q6ZVU0	165 aa		10.73	□□□□□ -0.69
SMARCA2-238	ENST00000635273	MYO19	Q96H55	970 aa		10.73	□□□□□ -0.69
SMARCA2-238	ENST00000635273	TRIM47	Q96LD4	638 aa		10.73	□□□□□ -0.69
SMARCA2-238	ENST00000635273	KLF16	Q9BXK1	252 aa	Predicted RBP	10.73	□□□□□ -0.69
SMARCA2-238	ENST00000635273	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.73	□□□□□ -0.69
SMARCA2-238	ENST00000635273	LRFN2	Q9ULH4	789 aa		10.73	□□□□□ -0.69
SMARCA2-238	ENST00000635273	EML1	O00423	815 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	NDUFB5	O43674	189 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	SNRPB	P14678	240 aa	Known RBP	10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	PTGIR	P43119	386 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	EIF1AX	P47813	144 aa	Known RBP	10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	CENPC	Q03188	943 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	TEAD4	Q15561	434 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	ALKBH2	Q6NS38	261 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	TMC7	Q7Z402	723 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	SNIP1	Q8TAD8	396 aa	Known RBP	10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	KIFC2	Q96AC6	838 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	ITPKC	Q96DU7	683 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	ATP13A2	Q9NQ11	1180 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	BRPF3	Q9ULD4	1205 aa		10.72	□□□□□ -0.69
SMARCA2-238	ENST00000635273	SERTM1	A2A2V5	107 aa		10.71	□□□□□ -0.69
SMARCA2-238	ENST00000635273	NBPF15	Q8N660	670 aa		10.71	□□□□□ -0.69
SMARCA2-238	ENST00000635273	ZDHHC1	Q8WTX9	485 aa		10.71	□□□□□ -0.69
SMARCA2-238	ENST00000635273	AGBL1	Q96MI9	1066 aa		10.71	□□□□□ -0.69
SMARCA2-238	ENST00000635273	FZD6	O60353	706 aa		10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ZIC2	O95409	532 aa	Predicted RBP	10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	NOS2	P35228	1153 aa		10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	HIRA	P54198	1017 aa	Predicted RBP	10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	SH3PXD2A	Q5TCZ1	1133 aa		10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ZNF295-AS1	Q8N0V1	137 aa		10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	CITED4	Q96RK1	184 aa		10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	CCDC87	Q9NVE4	849 aa		10.7	□□□□□ -0.7
SMARCA2-238	ENST00000635273	MEN1	O00255	615 aa		10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	AAMP	Q13685	434 aa		10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	EAPP	Q56P03	285 aa	Predicted RBP	10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	NGLY1	Q96IV0	654 aa		10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	NLRP3	Q96P20	1036 aa		10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ZFAND3	Q9H8U3	227 aa		10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	CABP1	Q9NZU7	370 aa		10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	HCN4	Q9Y3Q4	1203 aa		10.69	□□□□□ -0.7
SMARCA2-238	ENST00000635273	TTC24	A2A3L6	582 aa	Predicted RBP	10.68	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ZBTB39	O15060	712 aa		10.68	□□□□□ -0.7
SMARCA2-238	ENST00000635273	WDR4	P57081	412 aa	Known RBP	10.68	□□□□□ -0.7
SMARCA2-238	ENST00000635273	FAM26D	Q5JW98	314 aa		10.68	□□□□□ -0.7
SMARCA2-238	ENST00000635273	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.68	□□□□□ -0.7
SMARCA2-238	ENST00000635273	L3MBTL2	Q969R5	705 aa		10.68	□□□□□ -0.7
SMARCA2-238	ENST00000635273	ZNF232	Q9UNY5	417 aa		10.68	□□□□□ -0.7
SMARCA2-238	ENST00000635273		J3QL48	77 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms