RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 WDR90Q96KV7 1748 aa17.6■□□□□ 0.41
LINC00339-206ENST00000634451 RNMTO43148 476 aaKnown RBP17.59■□□□□ 0.41
LINC00339-206ENST00000634451 CYP19A1P11511 503 aaPredicted RBP17.59■□□□□ 0.41
LINC00339-206ENST00000634451 APLP1P51693 650 aa17.59■□□□□ 0.41
LINC00339-206ENST00000634451 NFIXQ14938 502 aa17.59■□□□□ 0.41
LINC00339-206ENST00000634451 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.4
LINC00339-206ENST00000634451 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
LINC00339-206ENST00000634451 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
LINC00339-206ENST00000634451 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
LINC00339-206ENST00000634451 RRAGCQ9HB90 399 aa17.57■□□□□ 0.4
LINC00339-206ENST00000634451 COL15A1P39059 1388 aa17.56■□□□□ 0.4
LINC00339-206ENST00000634451 NRXN2Q9P2S2 1712 aa17.56■□□□□ 0.4
LINC00339-206ENST00000634451 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
LINC00339-206ENST00000634451 ZPR1O75312 459 aa17.55■□□□□ 0.4
LINC00339-206ENST00000634451 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
LINC00339-206ENST00000634451 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
LINC00339-206ENST00000634451 DLEC1Q9Y238 1755 aa17.54■□□□□ 0.4
LINC00339-206ENST00000634451 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
LINC00339-206ENST00000634451 CCDC24Q8N4L8 307 aa17.54■□□□□ 0.4
LINC00339-206ENST00000634451 RBM46Q8TBY0 533 aaKnown RBP17.54■□□□□ 0.4
LINC00339-206ENST00000634451 CCDC88AQ3V6T2 1871 aa17.53■□□□□ 0.4
LINC00339-206ENST00000634451 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
LINC00339-206ENST00000634451 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
LINC00339-206ENST00000634451 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
LINC00339-206ENST00000634451 NARFQ9UHQ1 456 aa17.53■□□□□ 0.4
LINC00339-206ENST00000634451 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.4
LINC00339-206ENST00000634451 COL3A1P02461 1466 aaPredicted RBP17.52■□□□□ 0.4
LINC00339-206ENST00000634451 SERPINB2P05120 415 aa17.52■□□□□ 0.4
LINC00339-206ENST00000634451 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
LINC00339-206ENST00000634451 TIAM2Q8IVF5 1701 aa17.51■□□□□ 0.39
LINC00339-206ENST00000634451 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
LINC00339-206ENST00000634451 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
LINC00339-206ENST00000634451 KDM2BQ8NHM5 1336 aa17.49■□□□□ 0.39
LINC00339-206ENST00000634451 NFKBIEO00221 500 aa17.49■□□□□ 0.39
LINC00339-206ENST00000634451 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
LINC00339-206ENST00000634451 CCER1Q8TC90 406 aaPredicted RBP17.49■□□□□ 0.39
LINC00339-206ENST00000634451 ZNF496Q96IT1 587 aaPredicted RBP17.49■□□□□ 0.39
LINC00339-206ENST00000634451 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
LINC00339-206ENST00000634451 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
LINC00339-206ENST00000634451 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
LINC00339-206ENST00000634451 KLRG1Q96E93 195 aa17.48■□□□□ 0.39
LINC00339-206ENST00000634451 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
LINC00339-206ENST00000634451 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
LINC00339-206ENST00000634451 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
LINC00339-206ENST00000634451 KCNQ3O43525 872 aa17.47■□□□□ 0.39
LINC00339-206ENST00000634451 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
LINC00339-206ENST00000634451 COL13A1Q5TAT6 717 aaPredicted RBP17.47■□□□□ 0.39
LINC00339-206ENST00000634451 ZNF330Q9Y3S2 320 aaPredicted RBP17.47■□□□□ 0.39
LINC00339-206ENST00000634451 PCNTO95613 3336 aa17.47■□□□□ 0.39
LINC00339-206ENST00000634451 FSTL1Q12841 308 aa17.46■□□□□ 0.39
LINC00339-206ENST00000634451 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
LINC00339-206ENST00000634451 LMNB1P20700 586 aa17.45■□□□□ 0.38
LINC00339-206ENST00000634451 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
LINC00339-206ENST00000634451 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
LINC00339-206ENST00000634451 CACNA1SQ13698 1873 aa17.44■□□□□ 0.38
LINC00339-206ENST00000634451 POTECB2RU33 542 aa17.44■□□□□ 0.38
LINC00339-206ENST00000634451 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
LINC00339-206ENST00000634451 VSIG10Q8N0Z9 540 aa17.44■□□□□ 0.38
LINC00339-206ENST00000634451 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
LINC00339-206ENST00000634451 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
LINC00339-206ENST00000634451 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
LINC00339-206ENST00000634451 A1BGP04217 495 aa17.43■□□□□ 0.38
LINC00339-206ENST00000634451 PRR5LQ6MZQ0 368 aa17.43■□□□□ 0.38
LINC00339-206ENST00000634451 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
LINC00339-206ENST00000634451 GLTPD2A6NH11 291 aa17.42■□□□□ 0.38
LINC00339-206ENST00000634451 C21orf2O43822 256 aa17.42■□□□□ 0.38
LINC00339-206ENST00000634451 ZNF790Q6PG37 636 aa17.42■□□□□ 0.38
LINC00339-206ENST00000634451 TTC5Q8N0Z6 440 aa17.42■□□□□ 0.38
LINC00339-206ENST00000634451 SMC1BQ8NDV3 1235 aa17.42■□□□□ 0.38
LINC00339-206ENST00000634451 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC00339-206ENST00000634451 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
LINC00339-206ENST00000634451 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
LINC00339-206ENST00000634451 H0YIN7 160 aa17.41■□□□□ 0.38
LINC00339-206ENST00000634451 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
LINC00339-206ENST00000634451 STARD3NLO95772 234 aa17.4■□□□□ 0.38
LINC00339-206ENST00000634451 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
LINC00339-206ENST00000634451 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
LINC00339-206ENST00000634451 CAPN15O75808 1086 aa17.39■□□□□ 0.37
LINC00339-206ENST00000634451 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
LINC00339-206ENST00000634451 POTEJP0CG39 1038 aa17.39■□□□□ 0.37
LINC00339-206ENST00000634451 TEFQ10587 303 aa17.39■□□□□ 0.37
LINC00339-206ENST00000634451 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
LINC00339-206ENST00000634451 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
LINC00339-206ENST00000634451 ZC3H4Q9UPT8 1303 aaKnown RBP17.38■□□□□ 0.37
LINC00339-206ENST00000634451 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
LINC00339-206ENST00000634451 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
LINC00339-206ENST00000634451 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
LINC00339-206ENST00000634451 CEMIPQ8WUJ3 1361 aa17.37■□□□□ 0.37
LINC00339-206ENST00000634451 A0A087WZG4 1122 aa17.36■□□□□ 0.37
LINC00339-206ENST00000634451 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
LINC00339-206ENST00000634451 OLFM4Q6UX06 510 aa17.36■□□□□ 0.37
LINC00339-206ENST00000634451 GAS2L2Q8NHY3 880 aa17.36■□□□□ 0.37
LINC00339-206ENST00000634451 RSPH6AQ9H0K4 717 aa17.36■□□□□ 0.37
LINC00339-206ENST00000634451 ERFEQ4G0M1 354 aa17.35■□□□□ 0.37
LINC00339-206ENST00000634451 CNBD1Q8NA66 436 aa17.35■□□□□ 0.37
LINC00339-206ENST00000634451 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
LINC00339-206ENST00000634451 DDNO94850 711 aaPredicted RBP17.34■□□□□ 0.37
LINC00339-206ENST00000634451 HSPA1AP0DMV8 641 aaKnown RBP17.34■□□□□ 0.37
LINC00339-206ENST00000634451 HSPA1BP0DMV9 641 aaKnown RBP17.34■□□□□ 0.37
LINC00339-206ENST00000634451 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms