RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 FAM161BQ96MY7 647 aa6.9□□□□□ -1.3
CDRT1-208ENST00000630868 ZNF358Q9NW07 568 aa6.9□□□□□ -1.3
CDRT1-208ENST00000630868 RAPGEF6Q8TEU7 1601 aa6.9□□□□□ -1.31
CDRT1-208ENST00000630868 SOWAHBA6NEL2 793 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 TK2O00142 265 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 TREHO43280 583 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 HSPA2P54652 639 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 NBPF20Q3BBV1 942 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 RNF20Q5VTR2 975 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 FAM9AQ8IZU1 332 aaPredicted RBP6.89□□□□□ -1.31
CDRT1-208ENST00000630868 ANKK1Q8NFD2 765 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 PIK3R5Q8WYR1 880 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 SLC10A4Q96EP9 437 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 ARID4BQ4LE39 1312 aaPredicted RBP6.89□□□□□ -1.31
CDRT1-208ENST00000630868 POGZQ7Z3K3 1410 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 AKNAQ7Z591 1439 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 FANCAO15360 1455 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 MAGI2Q86UL8 1455 aa6.89□□□□□ -1.31
CDRT1-208ENST00000630868 SIGLEC1Q9BZZ2 1709 aa6.88□□□□□ -1.31
CDRT1-208ENST00000630868 TTC37Q6PGP7 1564 aa6.88□□□□□ -1.31
CDRT1-208ENST00000630868 IGFBP4P22692 258 aa6.88□□□□□ -1.31
CDRT1-208ENST00000630868 SCTRP47872 440 aa6.88□□□□□ -1.31
CDRT1-208ENST00000630868 USP4Q13107 963 aa6.88□□□□□ -1.31
CDRT1-208ENST00000630868 METTL16Q86W50 562 aaKnown RBP6.88□□□□□ -1.31
CDRT1-208ENST00000630868 CCDC24Q8N4L8 307 aa6.88□□□□□ -1.31
CDRT1-208ENST00000630868 BCL11AQ9H165 835 aa6.88□□□□□ -1.31
CDRT1-208ENST00000630868 TSR3Q9UJK0 312 aaKnown RBP6.88□□□□□ -1.31
CDRT1-208ENST00000630868 EFCAB5A4FU69 1503 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 YEATS2Q9ULM3 1422 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 FOXO3O43524 673 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 FAM13AO94988 1023 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 COPS2P61201 443 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 ADGRD1Q6QNK2 874 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 BAP1Q92560 729 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 TINF2Q9BSI4 451 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 C1QTNF2Q9BXJ5 285 aa6.87□□□□□ -1.31
CDRT1-208ENST00000630868 CFAP74Q9C0B2 1584 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 ZFYVE16Q7Z3T8 1539 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDRT1-208ENST00000630868 ARHGEF12Q9NZN5 1544 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 TMEM229AB2RXF0 380 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 HRO43593 1189 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 NDUFB5O43674 189 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 STAU1O95793 577 aaKnown RBP6.86□□□□□ -1.31
CDRT1-208ENST00000630868 IGHA2P01877 340 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 DSC3Q14574 896 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 AGERQ15109 404 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 BPHLQ86WA6 291 aaPredicted RBP6.86□□□□□ -1.31
CDRT1-208ENST00000630868 ZNF687Q8N1G0 1237 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 SAP130Q9H0E3 1048 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 PCDH10Q9P2E7 1040 aa6.86□□□□□ -1.31
CDRT1-208ENST00000630868 SETD1BQ9UPS6 1966 aaKnown RBP6.86□□□□□ -1.31
CDRT1-208ENST00000630868 PLEKHD1A6NEE1 506 aa6.85□□□□□ -1.31
CDRT1-208ENST00000630868 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
CDRT1-208ENST00000630868 RAB15P59190 212 aa6.85□□□□□ -1.31
CDRT1-208ENST00000630868 NT5DC4Q86YG4 428 aa6.85□□□□□ -1.31
CDRT1-208ENST00000630868 ZNF511Q8NB15 262 aa6.85□□□□□ -1.31
CDRT1-208ENST00000630868 SCG3Q8WXD2 468 aaKnown RBP6.85□□□□□ -1.31
CDRT1-208ENST00000630868 SETDB2Q96T68 719 aa6.85□□□□□ -1.31
CDRT1-208ENST00000630868 DUSP9Q99956 384 aaKnown RBP6.85□□□□□ -1.31
CDRT1-208ENST00000630868 PARP2Q9UGN5 583 aa6.85□□□□□ -1.31
CDRT1-208ENST00000630868 HECW1Q76N89 1606 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 GPR182O15218 404 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 FZD6O60353 706 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 PRPF40AO75400 957 aaKnown RBP6.84□□□□□ -1.31
CDRT1-208ENST00000630868 ADH1BP00325 375 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 CANXP27824 592 aaKnown RBP6.84□□□□□ -1.31
CDRT1-208ENST00000630868 MAPK8P45983 427 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 SCNN1DP51172 638 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 EPHA4P54764 986 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 FANCCQ00597 558 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 SEPT12Q8IYM1 358 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 TNS4Q8IZW8 715 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 CCDC87Q9NVE4 849 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 WBP1LQ9NX94 342 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 FER1L4A9Z1Z3 1794 aa6.84□□□□□ -1.31
CDRT1-208ENST00000630868 PLCH2O75038 1416 aa6.84□□□□□ -1.32
CDRT1-208ENST00000630868 STRCQ7RTU9 1775 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 TNFRSF10BO14763 440 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 PPM1GO15355 546 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-208ENST00000630868 MYCP01106 439 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-208ENST00000630868 EIF1AXP47813 144 aaKnown RBP6.83□□□□□ -1.32
CDRT1-208ENST00000630868 EHHADHQ08426 723 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 DPH6Q7L8W6 267 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 TMC4Q7Z404 712 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 TMEM87AQ8NBN3 555 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 TSPAN10Q9H1Z9 355 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-208ENST00000630868 BRPF3Q9ULD4 1205 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 ATP10AO60312 1499 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 PREX1Q8TCU6 1659 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 C9orf84Q5VXU9 1444 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 SCAPERQ9BY12 1400 aa6.83□□□□□ -1.32
CDRT1-208ENST00000630868 EMP3P54852 163 aa6.82□□□□□ -1.32
CDRT1-208ENST00000630868 LSM11P83369 360 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDRT1-208ENST00000630868 XPCQ01831 940 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms