RNA–Protein interactions for RNA: ENST00000630585.1

UBA3-212, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 4 BASIC

Gene UBA3, Length 390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-212ENST00000630585 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
UBA3-212ENST00000630585 ARHGAP27Q6ZUM4 889 aa16.25■□□□□ 0.19
UBA3-212ENST00000630585 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
UBA3-212ENST00000630585 NARFQ9UHQ1 456 aa16.25■□□□□ 0.19
UBA3-212ENST00000630585 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
UBA3-212ENST00000630585 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
UBA3-212ENST00000630585 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
UBA3-212ENST00000630585 COL15A1P39059 1388 aa16.25■□□□□ 0.19
UBA3-212ENST00000630585 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
UBA3-212ENST00000630585 STARD3NLO95772 234 aa16.24■□□□□ 0.19
UBA3-212ENST00000630585 KCNA3P22001 575 aa16.24■□□□□ 0.19
UBA3-212ENST00000630585 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
UBA3-212ENST00000630585 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
UBA3-212ENST00000630585 PRKAR2BP31323 418 aa16.23■□□□□ 0.19
UBA3-212ENST00000630585 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
UBA3-212ENST00000630585 PHACTR3Q96KR7 559 aa16.23■□□□□ 0.19
UBA3-212ENST00000630585 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
UBA3-212ENST00000630585 NFIXQ14938 502 aa16.22■□□□□ 0.19
UBA3-212ENST00000630585 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
UBA3-212ENST00000630585 TEX13AQ9BXU3 409 aaPredicted RBP16.22■□□□□ 0.19
UBA3-212ENST00000630585 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
UBA3-212ENST00000630585 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
UBA3-212ENST00000630585 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBA3-212ENST00000630585 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
UBA3-212ENST00000630585 HEG1Q9ULI3 1381 aa16.21■□□□□ 0.19
UBA3-212ENST00000630585 A0A087WZG4 1122 aa16.2■□□□□ 0.18
UBA3-212ENST00000630585 CHRNA5P30532 468 aa16.2■□□□□ 0.18
UBA3-212ENST00000630585 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
UBA3-212ENST00000630585 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
UBA3-212ENST00000630585 CEMIPQ8WUJ3 1361 aa16.19■□□□□ 0.18
UBA3-212ENST00000630585 SERPINB2P05120 415 aa16.19■□□□□ 0.18
UBA3-212ENST00000630585 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
UBA3-212ENST00000630585 NRXN2Q9P2S2 1712 aa16.19■□□□□ 0.18
UBA3-212ENST00000630585 BTBD11A6QL63 1104 aa16.18■□□□□ 0.18
UBA3-212ENST00000630585 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
UBA3-212ENST00000630585 SBF1O95248 1867 aa16.18■□□□□ 0.18
UBA3-212ENST00000630585 ZNF330Q9Y3S2 320 aaPredicted RBP16.17■□□□□ 0.18
UBA3-212ENST00000630585 KIF3CO14782 793 aa16.16■□□□□ 0.18
UBA3-212ENST00000630585 KCNQ3O43525 872 aa16.16■□□□□ 0.18
UBA3-212ENST00000630585 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
UBA3-212ENST00000630585 C9orf131Q5VYM1 1079 aa16.16■□□□□ 0.18
UBA3-212ENST00000630585 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
UBA3-212ENST00000630585 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
UBA3-212ENST00000630585 A1BGP04217 495 aa16.15■□□□□ 0.18
UBA3-212ENST00000630585 TBC1D2BQ9UPU7 963 aa16.15■□□□□ 0.18
UBA3-212ENST00000630585 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
UBA3-212ENST00000630585 MCM10Q7L590 875 aa16.14■□□□□ 0.17
UBA3-212ENST00000630585 H0YIN7 160 aa16.13■□□□□ 0.17
UBA3-212ENST00000630585 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
UBA3-212ENST00000630585 HSPA6P17066 643 aa16.13■□□□□ 0.17
UBA3-212ENST00000630585 TBC1D9BQ66K14 1250 aa16.13■□□□□ 0.17
UBA3-212ENST00000630585 C2CD5Q86YS7 1000 aa16.13■□□□□ 0.17
UBA3-212ENST00000630585 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
UBA3-212ENST00000630585 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
UBA3-212ENST00000630585 DLG5Q8TDM6 1919 aa16.12■□□□□ 0.17
UBA3-212ENST00000630585 DCTN1Q14203 1278 aa16.12■□□□□ 0.17
UBA3-212ENST00000630585 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
UBA3-212ENST00000630585 USP16Q9Y5T5 823 aa16.12■□□□□ 0.17
UBA3-212ENST00000630585 ANKRD31Q8N7Z5 1873 aa16.12■□□□□ 0.17
UBA3-212ENST00000630585 NEFMP07197 916 aa16.11■□□□□ 0.17
UBA3-212ENST00000630585 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
UBA3-212ENST00000630585 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
UBA3-212ENST00000630585 NMRK2Q9NPI5 230 aa16.11■□□□□ 0.17
UBA3-212ENST00000630585 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
UBA3-212ENST00000630585 TOMM70O94826 608 aa16.1■□□□□ 0.17
UBA3-212ENST00000630585 CAMTA2O94983 1202 aa16.1■□□□□ 0.17
UBA3-212ENST00000630585 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
UBA3-212ENST00000630585 SETDB2Q96T68 719 aa16.1■□□□□ 0.17
UBA3-212ENST00000630585 BCORQ6W2J9 1755 aa16.09■□□□□ 0.17
UBA3-212ENST00000630585 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
UBA3-212ENST00000630585 PDE6BP35913 854 aa16.09■□□□□ 0.17
UBA3-212ENST00000630585 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
UBA3-212ENST00000630585 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
UBA3-212ENST00000630585 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
UBA3-212ENST00000630585 KDM2BQ8NHM5 1336 aa16.09■□□□□ 0.17
UBA3-212ENST00000630585 NPHP1O15259 732 aa16.08■□□□□ 0.16
UBA3-212ENST00000630585 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
UBA3-212ENST00000630585 PRR5LQ6MZQ0 368 aa16.08■□□□□ 0.16
UBA3-212ENST00000630585 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■□□□□ 8.2
UBA3-212ENST00000630585 RASSF7Q02833 373 aa16.07■□□□□ 0.16
UBA3-212ENST00000630585 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
UBA3-212ENST00000630585 CCDC24Q8N4L8 307 aa16.07■□□□□ 0.16
UBA3-212ENST00000630585 CNBD1Q8NA66 436 aa16.07■□□□□ 0.16
UBA3-212ENST00000630585 LMNB1P20700 586 aa16.06■□□□□ 0.16
UBA3-212ENST00000630585 CLEC4GQ6UXB4 293 aa16.06■□□□□ 0.16
UBA3-212ENST00000630585 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
UBA3-212ENST00000630585 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
UBA3-212ENST00000630585 CEP350Q5VT06 3117 aa16.05■□□□□ 0.16
UBA3-212ENST00000630585 ST5P78524 1137 aa16.05■□□□□ 0.16
UBA3-212ENST00000630585 PNISRQ8TF01 805 aaKnown RBP16.05■□□□□ 0.16
UBA3-212ENST00000630585 ZNF652Q9Y2D9 606 aa16.05■□□□□ 0.16
UBA3-212ENST00000630585 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
UBA3-212ENST00000630585 COL11A2P13942 1736 aaPredicted RBP16.05■□□□□ 0.16
UBA3-212ENST00000630585 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
UBA3-212ENST00000630585 NBPF26B4DH59 902 aa16.04■□□□□ 0.16
UBA3-212ENST00000630585 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
UBA3-212ENST00000630585 NBPF10Q6P3W6 841 aaKnown RBP16.04■□□□□ 0.16
UBA3-212ENST00000630585 NBPF15Q8N660 670 aa16.04■□□□□ 0.16
UBA3-212ENST00000630585 RBM46Q8TBY0 533 aaKnown RBP16.04■□□□□ 0.16
UBA3-212ENST00000630585 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms