RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 RAPGEF4Q8WZA2 1011 aa7.49□□□□□ -1.21
LINC00550-202ENST00000629570 HCSTQ9UBK5 93 aa7.49□□□□□ -1.21
LINC00550-202ENST00000629570 SHANK3Q9BYB0 1731 aa7.49□□□□□ -1.21
LINC00550-202ENST00000629570 EXOC5O00471 708 aa7.48□□□□□ -1.21
LINC00550-202ENST00000629570 DIAPH1O60610 1272 aaKnown RBP7.48□□□□□ -1.21
LINC00550-202ENST00000629570 OXER1Q8TDS5 423 aa7.48□□□□□ -1.21
LINC00550-202ENST00000629570 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
LINC00550-202ENST00000629570 KDRP35968 1356 aa7.47□□□□□ -1.21
LINC00550-202ENST00000629570 TRIM37O94972 964 aa7.47□□□□□ -1.21
LINC00550-202ENST00000629570 TATP17735 454 aaPredicted RBP7.47□□□□□ -1.21
LINC00550-202ENST00000629570 SULT6B1Q6IMI4 303 aa7.47□□□□□ -1.21
LINC00550-202ENST00000629570 FAM196AQ6ZSG2 479 aa7.47□□□□□ -1.21
LINC00550-202ENST00000629570 DDX54Q8TDD1 881 aaKnown RBP7.47□□□□□ -1.21
LINC00550-202ENST00000629570 KCNK17Q96T54 332 aa7.47□□□□□ -1.21
LINC00550-202ENST00000629570 CRISPLD2Q9H0B8 497 aa7.47□□□□□ -1.21
LINC00550-202ENST00000629570 PKD1L3Q7Z443 1732 aa7.47□□□□□ -1.21
LINC00550-202ENST00000629570 TNS1Q9HBL0 1735 aaKnown RBP7.47□□□□□ -1.21
LINC00550-202ENST00000629570 BCL9O00512 1426 aa7.46□□□□□ -1.21
LINC00550-202ENST00000629570 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
LINC00550-202ENST00000629570 HMOX1P09601 288 aa7.46□□□□□ -1.22
LINC00550-202ENST00000629570 RALBP1Q15311 655 aa7.46□□□□□ -1.22
LINC00550-202ENST00000629570 PTF1AQ7RTS3 328 aa7.46□□□□□ -1.22
LINC00550-202ENST00000629570 ZCRB1Q8TBF4 217 aaKnown RBP7.46□□□□□ -1.22
LINC00550-202ENST00000629570 CFAP53Q96M91 514 aa7.46□□□□□ -1.22
LINC00550-202ENST00000629570 PRKRIP1Q9H875 184 aaPredicted RBP7.46□□□□□ -1.22
LINC00550-202ENST00000629570 MYBBP1AQ9BQG0 1328 aaKnown RBP7.46□□□□□ -1.22
LINC00550-202ENST00000629570 PCDH11XQ9BZA7 1347 aa7.46□□□□□ -1.22
LINC00550-202ENST00000629570 PCDH11YQ9BZA8 1340 aa7.46□□□□□ -1.22
LINC00550-202ENST00000629570 CYP27B1O15528 508 aa7.45□□□□□ -1.22
LINC00550-202ENST00000629570 DEFB132Q7Z7B7 95 aa7.45□□□□□ -1.22
LINC00550-202ENST00000629570 RYDENQ9NUL5 291 aaKnown RBP7.45□□□□□ -1.22
LINC00550-202ENST00000629570 SBF2Q86WG5 1849 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 KCNQ2O43526 872 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 PPP1R15BQ5SWA1 713 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 CCDC125Q86Z20 511 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 KCTD12Q96CX2 325 aaKnown RBP7.44□□□□□ -1.22
LINC00550-202ENST00000629570 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 SPG7Q9UQ90 795 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 NHSQ6T4R5 1651 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 PLEKHG2Q9H7P9 1386 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 DOT1LQ8TEK3 1739 aa7.44□□□□□ -1.22
LINC00550-202ENST00000629570 U2AF1L5P0DN76 240 aaPredicted RBP7.43□□□□□ -1.22
LINC00550-202ENST00000629570 U2AF1Q01081 240 aaKnown RBP eCLIP7.43□□□□□ -1.22
LINC00550-202ENST00000629570 SF3B2Q13435 895 aaKnown RBP7.43□□□□□ -1.22
LINC00550-202ENST00000629570 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
LINC00550-202ENST00000629570 TOGARAM1Q9Y4F4 1720 aa7.43□□□□□ -1.22
LINC00550-202ENST00000629570 APBA3O96018 575 aa7.42□□□□□ -1.22
LINC00550-202ENST00000629570 PHKG2P15735 406 aa7.42□□□□□ -1.22
LINC00550-202ENST00000629570 PRKAR2BP31323 418 aa7.42□□□□□ -1.22
LINC00550-202ENST00000629570 BAG6P46379 1132 aa7.42□□□□□ -1.22
LINC00550-202ENST00000629570 PRIM1P49642 420 aaKnown RBP7.42□□□□□ -1.22
LINC00550-202ENST00000629570 EN1Q05925 392 aaPredicted RBP7.42□□□□□ -1.22
LINC00550-202ENST00000629570 PLEKHO1Q53GL0 409 aaPredicted RBP7.42□□□□□ -1.22
LINC00550-202ENST00000629570 ZNF530Q6P9A1 599 aaPredicted RBP7.42□□□□□ -1.22
LINC00550-202ENST00000629570 SYTL4Q96C24 671 aaPredicted RBP7.42□□□□□ -1.22
LINC00550-202ENST00000629570 RSPH6AQ9H0K4 717 aa7.42□□□□□ -1.22
LINC00550-202ENST00000629570 NUDCQ9Y266 331 aa7.42□□□□□ -1.22
LINC00550-202ENST00000629570 KDM6AO15550 1401 aaPredicted RBP7.42□□□□□ -1.22
LINC00550-202ENST00000629570 MTHFSDQ2M296 383 aaKnown RBP7.41□□□□□ -1.22
LINC00550-202ENST00000629570 AMOTQ4VCS5 1084 aa7.41□□□□□ -1.22
LINC00550-202ENST00000629570 IFNL2Q8IZJ0 200 aa7.41□□□□□ -1.22
LINC00550-202ENST00000629570 PHACTR3Q96KR7 559 aa7.41□□□□□ -1.22
LINC00550-202ENST00000629570 BCL2L12Q9HB09 334 aa7.41□□□□□ -1.22
LINC00550-202ENST00000629570 VPS9D1Q9Y2B5 631 aa7.41□□□□□ -1.22
LINC00550-202ENST00000629570 BTAF1O14981 1849 aa7.41□□□□□ -1.22
LINC00550-202ENST00000629570 ANP32CO43423 234 aa7.4□□□□□ -1.22
LINC00550-202ENST00000629570 FOSBP53539 338 aa7.4□□□□□ -1.22
LINC00550-202ENST00000629570 EZH2Q15910 746 aaKnown RBP7.4□□□□□ -1.22
LINC00550-202ENST00000629570 CCDC184Q52MB2 194 aa7.4□□□□□ -1.22
LINC00550-202ENST00000629570 C1orf141Q5JVX7 400 aa7.4□□□□□ -1.22
LINC00550-202ENST00000629570 CAMKK2Q96RR4 588 aa7.4□□□□□ -1.22
LINC00550-202ENST00000629570 KAT6BQ8WYB5 2073 aa7.39□□□□□ -1.23
LINC00550-202ENST00000629570 FCHSD2O94868 740 aa7.39□□□□□ -1.23
LINC00550-202ENST00000629570 PDE4AP27815 886 aa7.39□□□□□ -1.23
LINC00550-202ENST00000629570 MPRIPQ6WCQ1 1025 aa7.39□□□□□ -1.23
LINC00550-202ENST00000629570 DCAF5Q96JK2 942 aa7.39□□□□□ -1.23
LINC00550-202ENST00000629570 RGPD3A6NKT7 1758 aaPredicted RBP7.38□□□□□ -1.23
LINC00550-202ENST00000629570 RGPD4Q7Z3J3 1758 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 RREB1Q92766 1687 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 MAP3K5Q99683 1374 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 PLSCR1O15162 318 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 GTPBP6O43824 516 aaPredicted RBP7.38□□□□□ -1.23
LINC00550-202ENST00000629570 HSP90AB1P08238 724 aaKnown RBP7.38□□□□□ -1.23
LINC00550-202ENST00000629570 AKAP4Q5JQC9 854 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 GAS2L2Q8NHY3 880 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 PIGBQ92521 554 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 PLEKHF1Q96S99 279 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 ITGB4P16144 1822 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 NUP188Q5SRE5 1749 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 ADAMTS7Q9UKP4 1686 aa7.38□□□□□ -1.23
LINC00550-202ENST00000629570 MRC1P22897 1456 aa7.37□□□□□ -1.23
LINC00550-202ENST00000629570 PALLDQ8WX93 1383 aa7.37□□□□□ -1.23
LINC00550-202ENST00000629570 KCNQ4P56696 695 aa7.37□□□□□ -1.23
LINC00550-202ENST00000629570 WDR43Q15061 677 aaKnown RBP eCLIP7.37□□□□□ -1.23
LINC00550-202ENST00000629570 TXNRD1Q16881 649 aa7.37□□□□□ -1.23
LINC00550-202ENST00000629570 SLC4A5Q9BY07 1137 aa7.37□□□□□ -1.23
LINC00550-202ENST00000629570 LGR6Q9HBX8 967 aa7.37□□□□□ -1.23
LINC00550-202ENST00000629570 ANO8Q9HCE9 1232 aaPredicted RBP7.37□□□□□ -1.23
LINC00550-202ENST00000629570 TMOD3Q9NYL9 352 aa7.37□□□□□ -1.23
LINC00550-202ENST00000629570 ADAMTS8Q9UP79 889 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms