RNA–Protein interactions for RNA: ENST00000629252.2

UBE3A-218, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 1,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-218ENST00000629252 COL15A1P39059 1388 aa27.6■■■□□ 2.01
UBE3A-218ENST00000629252 CYP19A1P11511 503 aaPredicted RBP27.59■■■□□ 2.01
UBE3A-218ENST00000629252 C16orf71Q8IYS4 520 aaPredicted RBP27.59■■■□□ 2.01
UBE3A-218ENST00000629252 KCPQ6ZWJ8 1503 aa27.58■■■□□ 2.01
UBE3A-218ENST00000629252 ZBTB1Q9Y2K1 713 aa27.58■■■□□ 2.01
UBE3A-218ENST00000629252 TM4SF1P30408 202 aa27.57■■■□□ 2
UBE3A-218ENST00000629252 APLP1P51693 650 aa27.57■■■□□ 2
UBE3A-218ENST00000629252 CANXP27824 592 aaKnown RBP27.55■■■□□ 2
UBE3A-218ENST00000629252 NFIXQ14938 502 aa27.55■■■□□ 2
UBE3A-218ENST00000629252 NARFQ9UHQ1 456 aa27.55■■■□□ 2
UBE3A-218ENST00000629252 U2SURPO15042 1029 aaKnown RBP27.54■■■□□ 2
UBE3A-218ENST00000629252 AFDNP55196 1824 aaKnown RBP27.54■■■□□ 2
UBE3A-218ENST00000629252 TTC5Q8N0Z6 440 aa27.54■■■□□ 2
UBE3A-218ENST00000629252 KDM2BQ8NHM5 1336 aa27.52■■■□□ 2
UBE3A-218ENST00000629252 BICDL1Q6ZP65 573 aa27.52■■■□□ 2
UBE3A-218ENST00000629252 RASSF7Q02833 373 aa27.51■■□□□ 1.99
UBE3A-218ENST00000629252 ZNF330Q9Y3S2 320 aaPredicted RBP27.51■■□□□ 1.99
UBE3A-218ENST00000629252 SERPINB2P05120 415 aa27.5■■□□□ 1.99
UBE3A-218ENST00000629252 UBR2Q8IWV8 1755 aa27.5■■□□□ 1.99
UBE3A-218ENST00000629252 PER1O15534 1290 aaPredicted RBP27.49■■□□□ 1.99
UBE3A-218ENST00000629252 TEFQ10587 303 aa27.48■■□□□ 1.99
UBE3A-218ENST00000629252 VSIG10Q8N0Z9 540 aa27.48■■□□□ 1.99
UBE3A-218ENST00000629252 RBM46Q8TBY0 533 aaKnown RBP27.48■■□□□ 1.99
UBE3A-218ENST00000629252 BCL2L12Q9HB09 334 aa27.48■■□□□ 1.99
UBE3A-218ENST00000629252 RRAGCQ9HB90 399 aa27.48■■□□□ 1.99
UBE3A-218ENST00000629252 SBF1O95248 1867 aa27.48■■□□□ 1.99
UBE3A-218ENST00000629252 STARD3NLO95772 234 aa27.47■■□□□ 1.99
UBE3A-218ENST00000629252 C2CD5Q86YS7 1000 aa27.46■■□□□ 1.99
UBE3A-218ENST00000629252 WDR90Q96KV7 1748 aa27.46■■□□□ 1.99
UBE3A-218ENST00000629252 NRXN2Q9P2S2 1712 aa27.46■■□□□ 1.99
UBE3A-218ENST00000629252 CARMIL3Q8ND23 1372 aa27.46■■□□□ 1.99
UBE3A-218ENST00000629252 HTRA3P83110 453 aa27.45■■□□□ 1.98
UBE3A-218ENST00000629252 TNRC6CQ9HCJ0 1690 aaKnown RBP27.45■■□□□ 1.98
UBE3A-218ENST00000629252 COL3A1P02461 1466 aaPredicted RBP27.44■■□□□ 1.98
UBE3A-218ENST00000629252 GNAT3A8MTJ3 354 aa27.44■■□□□ 1.98
UBE3A-218ENST00000629252 TTLL6Q8N841 843 aa27.44■■□□□ 1.98
UBE3A-218ENST00000629252 ZNF496Q96IT1 587 aaPredicted RBP27.44■■□□□ 1.98
UBE3A-218ENST00000629252 DLEC1Q9Y238 1755 aa27.44■■□□□ 1.98
UBE3A-218ENST00000629252 GAS2L2Q8NHY3 880 aa27.43■■□□□ 1.98
UBE3A-218ENST00000629252 A0A087WZG4 1122 aa27.42■■□□□ 1.98
UBE3A-218ENST00000629252 H0YIN7 160 aa27.42■■□□□ 1.98
UBE3A-218ENST00000629252 HEG1Q9ULI3 1381 aa27.41■■□□□ 1.98
UBE3A-218ENST00000629252 EIF5P55010 431 aaKnown RBP27.41■■□□□ 1.98
UBE3A-218ENST00000629252 ZNF790Q6PG37 636 aa27.41■■□□□ 1.98
UBE3A-218ENST00000629252 DNAJC5GQ8N7S2 189 aa27.41■■□□□ 1.98
UBE3A-218ENST00000629252 IL17REQ8NFR9 667 aa27.41■■□□□ 1.98
UBE3A-218ENST00000629252 TBC1D2BQ9UPU7 963 aa27.41■■□□□ 1.98
UBE3A-218ENST00000629252 LMNB1P20700 586 aa27.4■■□□□ 1.98
UBE3A-218ENST00000629252 TBC1D9BQ66K14 1250 aa27.4■■□□□ 1.98
UBE3A-218ENST00000629252 NPM2Q86SE8 214 aaKnown RBP27.4■■□□□ 1.98
UBE3A-218ENST00000629252 CCDC24Q8N4L8 307 aa27.4■■□□□ 1.98
UBE3A-218ENST00000629252 ZNF219Q9P2Y4 722 aaPredicted RBP27.4■■□□□ 1.98
UBE3A-218ENST00000629252 NPHP1O15259 732 aa27.39■■□□□ 1.98
UBE3A-218ENST00000629252 FSTL1Q12841 308 aa27.39■■□□□ 1.98
UBE3A-218ENST00000629252 ZNF622Q969S3 477 aaKnown RBP eCLIP27.39■■□□□ 1.98
UBE3A-218ENST00000629252 SCN7AQ01118 1682 aa27.39■■□□□ 1.97
UBE3A-218ENST00000629252 TIAM2Q8IVF5 1701 aa27.38■■□□□ 1.97
UBE3A-218ENST00000629252 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
UBE3A-218ENST00000629252 CCDC88AQ3V6T2 1871 aa27.37■■□□□ 1.97
UBE3A-218ENST00000629252 TEX13AQ9BXU3 409 aaPredicted RBP27.37■■□□□ 1.97
UBE3A-218ENST00000629252 PRELPP51888 382 aa27.36■■□□□ 1.97
UBE3A-218ENST00000629252 FMNL2Q96PY5 1086 aa27.36■■□□□ 1.97
UBE3A-218ENST00000629252 NPC1L1Q9UHC9 1359 aa27.35■■□□□ 1.97
UBE3A-218ENST00000629252 A1BGP04217 495 aa27.35■■□□□ 1.97
UBE3A-218ENST00000629252 PRKAR2BP31323 418 aa27.35■■□□□ 1.97
UBE3A-218ENST00000629252 ANKRD31Q8N7Z5 1873 aa27.35■■□□□ 1.97
UBE3A-218ENST00000629252 ZC3H4Q9UPT8 1303 aaKnown RBP27.35■■□□□ 1.97
UBE3A-218ENST00000629252 SMC1BQ8NDV3 1235 aa27.34■■□□□ 1.97
UBE3A-218ENST00000629252 CFAP53Q96M91 514 aa27.34■■□□□ 1.97
UBE3A-218ENST00000629252 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
UBE3A-218ENST00000629252 NFKBIEO00221 500 aa27.33■■□□□ 1.97
UBE3A-218ENST00000629252 KCNQ3O43525 872 aa27.33■■□□□ 1.97
UBE3A-218ENST00000629252 PRR5LQ6MZQ0 368 aa27.33■■□□□ 1.97
UBE3A-218ENST00000629252 PHACTR3Q96KR7 559 aa27.33■■□□□ 1.97
UBE3A-218ENST00000629252 COL11A2P13942 1736 aaPredicted RBP27.33■■□□□ 1.96
UBE3A-218ENST00000629252 GLTPD2A6NH11 291 aa27.32■■□□□ 1.96
UBE3A-218ENST00000629252 C21orf2O43822 256 aa27.32■■□□□ 1.96
UBE3A-218ENST00000629252 PDE6BP35913 854 aa27.32■■□□□ 1.96
UBE3A-218ENST00000629252 IL6STP40189 918 aaPredicted RBP27.32■■□□□ 1.96
UBE3A-218ENST00000629252 PIP4K2AP48426 406 aaPredicted RBP27.32■■□□□ 1.96
UBE3A-218ENST00000629252 KLRG1Q96E93 195 aa27.32■■□□□ 1.96
UBE3A-218ENST00000629252 VEGFAP15692 232 aaPredicted RBP27.3■■□□□ 1.96
UBE3A-218ENST00000629252 CNBD1Q8NA66 436 aa27.3■■□□□ 1.96
UBE3A-218ENST00000629252 SETDB2Q96T68 719 aa27.3■■□□□ 1.96
UBE3A-218ENST00000629252 BRIP1Q9BX63 1249 aa27.3■■□□□ 1.96
UBE3A-218ENST00000629252 RSPH6AQ9H0K4 717 aa27.29■■□□□ 1.96
UBE3A-218ENST00000629252 CACNA1SQ13698 1873 aa27.29■■□□□ 1.96
UBE3A-218ENST00000629252 CEMIPQ8WUJ3 1361 aa27.28■■□□□ 1.96
UBE3A-218ENST00000629252 DZIP3Q86Y13 1208 aaKnown RBP27.28■■□□□ 1.96
UBE3A-218ENST00000629252 CAMTA2O94983 1202 aa27.27■■□□□ 1.96
UBE3A-218ENST00000629252 U2AF1L5P0DN76 240 aaPredicted RBP27.27■■□□□ 1.96
UBE3A-218ENST00000629252 ST5P78524 1137 aa27.27■■□□□ 1.96
UBE3A-218ENST00000629252 U2AF1Q01081 240 aaKnown RBP eCLIP27.27■■□□□ 1.96
UBE3A-218ENST00000629252 NUDCQ9Y266 331 aa27.27■■□□□ 1.96
UBE3A-218ENST00000629252 ERFEQ4G0M1 354 aa27.26■■□□□ 1.95
UBE3A-218ENST00000629252 RTF1Q92541 710 aaKnown RBP27.26■■□□□ 1.95
UBE3A-218ENST00000629252 PDZRN3Q9UPQ7 1066 aa27.26■■□□□ 1.95
UBE3A-218ENST00000629252 BCORQ6W2J9 1755 aa27.25■■□□□ 1.95
UBE3A-218ENST00000629252 PRAMEF22A3QJZ6 481 aa27.25■■□□□ 1.95
UBE3A-218ENST00000629252 DPY19L2Q6NUT2 758 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms