RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 RRP9O43818 475 aaKnown RBP7.83□□□□□ -1.16
CHD2-215ENST00000628375 NBPF14Q5TI25 921 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 NUTM1Q86Y26 1132 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 SLIT2O94813 1529 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 KDM2BQ8NHM5 1336 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 DUSP27Q5VZP5 1158 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 TTLL7Q6ZT98 887 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 LINC00116Q8NCU8 138 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 CHPF2Q9P2E5 772 aa7.83□□□□□ -1.16
CHD2-215ENST00000628375 CRKLP46109 303 aaKnown RBP7.82□□□□□ -1.16
CHD2-215ENST00000628375 USPL1Q5W0Q7 1092 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 VSIG10Q8N0Z9 540 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
CHD2-215ENST00000628375 RGPD5Q99666 1765 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 NSD2O96028 1365 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 CDK12Q9NYV4 1490 aaPredicted RBP7.82□□□□□ -1.16
CHD2-215ENST00000628375 COPS6Q7L5N1 327 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 G2E3Q7L622 706 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 STK32BQ9NY57 414 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 PALLDQ8WX93 1383 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 GOLGA2Q08379 1002 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 FKBP5Q13451 457 aaPredicted RBP7.82□□□□□ -1.16
CHD2-215ENST00000628375 C8orf34Q49A92 452 aa7.82□□□□□ -1.16
CHD2-215ENST00000628375 ONECUT3O60422 494 aaPredicted RBP7.81□□□□□ -1.16
CHD2-215ENST00000628375 ZPR1O75312 459 aa7.81□□□□□ -1.16
CHD2-215ENST00000628375 FAM161AQ3B820 660 aa7.81□□□□□ -1.16
CHD2-215ENST00000628375 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
CHD2-215ENST00000628375 RTCBQ9Y3I0 505 aaKnown RBP7.81□□□□□ -1.16
CHD2-215ENST00000628375 TWISTNBQ3B726 338 aaPredicted RBP7.81□□□□□ -1.16
CHD2-215ENST00000628375 TRAPPC3LQ5T215 181 aa7.81□□□□□ -1.16
CHD2-215ENST00000628375 L1TD1Q5T7N2 865 aaKnown RBP7.81□□□□□ -1.16
CHD2-215ENST00000628375 FMNL2Q96PY5 1086 aa7.81□□□□□ -1.16
CHD2-215ENST00000628375 HSP90AB1P08238 724 aaKnown RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 RIC3Q7Z5B4 369 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 SLC51AQ86UW1 340 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 COL23A1Q86Y22 540 aaPredicted RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 ARHGEF1Q92888 912 aaKnown RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 CDCA7Q9BWT1 371 aaPredicted RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 TAOK2Q9UL54 1235 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 KIF1AQ12756 1690 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 STARD3NLO95772 234 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 SMC4Q9NTJ3 1288 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 TRPM3Q9HCF6 1732 aaPredicted RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 COL3A1P02461 1466 aaPredicted RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 AHDC1Q5TGY3 1603 aaPredicted RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 HSP90AA2PQ14568 343 aaPredicted RBP7.8□□□□□ -1.16
CHD2-215ENST00000628375 HLFQ16534 295 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 SKAP1Q86WV1 359 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
CHD2-215ENST00000628375 ATRNO75882 1429 aa7.79□□□□□ -1.16
CHD2-215ENST00000628375 CLCN1P35523 988 aa7.79□□□□□ -1.16
CHD2-215ENST00000628375 CAMKK2Q96RR4 588 aa7.79□□□□□ -1.16
CHD2-215ENST00000628375 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
CHD2-215ENST00000628375 HCLS1P14317 486 aaPredicted RBP7.79□□□□□ -1.16
CHD2-215ENST00000628375 SLC15A2Q16348 729 aa7.79□□□□□ -1.16
CHD2-215ENST00000628375 CWF19L2Q2TBE0 894 aaKnown RBP7.79□□□□□ -1.16
CHD2-215ENST00000628375 ZNF622Q969S3 477 aaKnown RBP eCLIP7.79□□□□□ -1.162e-7■■■□□ 15.6
CHD2-215ENST00000628375 PHRF1Q9P1Y6 1649 aaKnown RBP7.79□□□□□ -1.16
CHD2-215ENST00000628375 A0A0G2JLW4 131 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 MMP10P09238 476 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 CENPQQ7L2Z9 268 aaPredicted RBP7.78□□□□□ -1.16
CHD2-215ENST00000628375 DZIP3Q86Y13 1208 aaKnown RBP7.78□□□□□ -1.16
CHD2-215ENST00000628375 FAM89AQ96GI7 184 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 CRBNQ96SW2 442 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 C1orf115Q9H7X2 142 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 PI4KAP2A4QPH2 592 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
CHD2-215ENST00000628375 OLFM4Q6UX06 510 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 PI4KAP1Q8N8J0 262 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 STK31Q9BXU1 1019 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 HSP90AA1P07900 732 aaKnown RBP7.78□□□□□ -1.16
CHD2-215ENST00000628375 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
CHD2-215ENST00000628375 NIP7Q9Y221 180 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHD2-215ENST00000628375 ZNF521Q96K83 1311 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 RGPD1P0DJD0 1748 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 CRYBG1Q9Y4K1 1723 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 RGPD2P0DJD1 1756 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 OVOS2A0A0G2JMS6 1433 aa7.78□□□□□ -1.16
CHD2-215ENST00000628375 NBPF26B4DH59 902 aa7.77□□□□□ -1.17
CHD2-215ENST00000628375 ERVV-2B6SEH9 535 aa7.77□□□□□ -1.17
CHD2-215ENST00000628375 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
CHD2-215ENST00000628375 CHRNA5P30532 468 aa7.77□□□□□ -1.17
CHD2-215ENST00000628375 NBPF10Q6P3W6 841 aaKnown RBP7.77□□□□□ -1.17
CHD2-215ENST00000628375 NBPF15Q8N660 670 aa7.77□□□□□ -1.17
CHD2-215ENST00000628375 MYD88Q99836 296 aa7.77□□□□□ -1.17
CHD2-215ENST00000628375 NFAT5O94916 1531 aa7.77□□□□□ -1.17
CHD2-215ENST00000628375 GNAI1P63096 354 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 PEAK1Q9H792 1746 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 GPR162Q16538 588 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 PANK1Q8TE04 598 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 CFAP44Q96MT7 982 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 BCS1LQ9Y276 419 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 ALS2Q96Q42 1657 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 FSD2A1L4K1 749 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 SSH1Q8WYL5 1049 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 CCDC87Q9NVE4 849 aa7.76□□□□□ -1.17
CHD2-215ENST00000628375 NHSL1Q5SYE7 1610 aa7.75□□□□□ -1.17
CHD2-215ENST00000628375 LMOD3Q0VAK6 560 aa7.75□□□□□ -1.17
CHD2-215ENST00000628375 TRMT2AQ8IZ69 625 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms