RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ELL2O00472 640 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 RNMTO43148 476 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 VAMP4O75379 141 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 C20orf194Q5TEA3 1177 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 TSPYL6Q8N831 410 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 C8orf58Q8NAV2 365 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
SOX2-OT-244ENST00000627738 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-244ENST00000627738 TWISTNBQ3B726 338 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-244ENST00000627738 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.37
SOX2-OT-244ENST00000627738 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-244ENST00000627738 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.37
SOX2-OT-244ENST00000627738 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.37
SOX2-OT-244ENST00000627738 JCADQ9P266 1359 aa12.77□□□□□ -0.37
SOX2-OT-244ENST00000627738 IL2RBP14784 551 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 PHKG2P15735 406 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 ALDH1L2Q3SY69 923 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 EXOC6Q8TAG9 804 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 CRBNQ96SW2 442 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 OVOS2A0A0G2JMS6 1433 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
SOX2-OT-244ENST00000627738 TEFQ10587 303 aa12.75□□□□□ -0.37
SOX2-OT-244ENST00000627738 PLCH1Q4KWH8 1693 aa12.75□□□□□ -0.37
SOX2-OT-244ENST00000627738 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-244ENST00000627738 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
SOX2-OT-244ENST00000627738 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-244ENST00000627738 CYP27B1O15528 508 aa12.74□□□□□ -0.37
SOX2-OT-244ENST00000627738 NBR1Q14596 966 aa12.74□□□□□ -0.37
SOX2-OT-244ENST00000627738 HSPA1LP34931 641 aa12.73□□□□□ -0.37
SOX2-OT-244ENST00000627738 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
SOX2-OT-244ENST00000627738 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
SOX2-OT-244ENST00000627738 VIRMAQ69YN4 1812 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-244ENST00000627738 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
SOX2-OT-244ENST00000627738 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 NRAPQ86VF7 1730 aa12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 TCERG1O14776 1098 aaKnown RBP12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
SOX2-OT-244ENST00000627738 G3V3G9 751 aa12.71□□□□□ -0.37
SOX2-OT-244ENST00000627738 BRPF1P55201 1214 aaPredicted RBP12.71□□□□□ -0.37
SOX2-OT-244ENST00000627738 B4GALNT3Q6L9W6 998 aa12.71□□□□□ -0.37
SOX2-OT-244ENST00000627738 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
SOX2-OT-244ENST00000627738 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
SOX2-OT-244ENST00000627738 SLIT2O94813 1529 aa12.71□□□□□ -0.38
SOX2-OT-244ENST00000627738 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
SOX2-OT-244ENST00000627738 KIF16BQ96L93 1317 aa12.7□□□□□ -0.38
SOX2-OT-244ENST00000627738 KCNQ3O43525 872 aa12.7□□□□□ -0.38
SOX2-OT-244ENST00000627738 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
SOX2-OT-244ENST00000627738 KDM3BQ7LBC6 1761 aa12.7□□□□□ -0.38
SOX2-OT-244ENST00000627738 SCN11AQ9UI33 1791 aa12.7□□□□□ -0.38
SOX2-OT-244ENST00000627738 DISP2A7MBM2 1401 aa12.7□□□□□ -0.38
SOX2-OT-244ENST00000627738 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 NWD2Q9ULI1 1742 aa12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 IPO8O15397 1037 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 TRIM27P14373 513 aa12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 EMP3P54852 163 aa12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 EIF4A1P60842 406 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 DDX54Q8TDD1 881 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
SOX2-OT-244ENST00000627738 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 MS4A1P11836 297 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 RLBP1P12271 317 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 NGLY1Q96IV0 654 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 CCDC136Q96JN2 1154 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 LRP6O75581 1613 aa12.68□□□□□ -0.38
SOX2-OT-244ENST00000627738 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 SPATA31A5Q5VU36 1347 aa12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 SPATA31A7Q8IWB4 1347 aa12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 MRC1P22897 1456 aa12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 CABP4P57796 275 aa12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 FTSJ3Q8IY81 847 aaKnown RBP12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 THRAP3Q9Y2W1 955 aaKnown RBP12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
SOX2-OT-244ENST00000627738 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
SOX2-OT-244ENST00000627738 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-244ENST00000627738 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
SOX2-OT-244ENST00000627738 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-244ENST00000627738 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms