RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 SCN11AQ9UI33 1791 aa10.94□□□□□ -0.66
CHD2-211ENST00000627460 NWD2Q9ULI1 1742 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 PLCH1Q4KWH8 1693 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 ELL2O00472 640 aaPredicted RBP10.93□□□□□ -0.66
CHD2-211ENST00000627460 MPRIPQ6WCQ1 1025 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 ITPRIPQ8IWB1 547 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 CERKQ8TCT0 537 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 PANK1Q8TE04 598 aa10.93□□□□□ -0.66
CHD2-211ENST00000627460 RWDD1Q9H446 243 aaPredicted RBP10.93□□□□□ -0.66
CHD2-211ENST00000627460 ABCC4O15439 1325 aa10.92□□□□□ -0.66
CHD2-211ENST00000627460 EIF4A1P60842 406 aaKnown RBP10.92□□□□□ -0.66
CHD2-211ENST00000627460 HDGFL1Q5TGJ6 251 aa10.92□□□□□ -0.66
CHD2-211ENST00000627460 LGR6Q9HBX8 967 aa10.92□□□□□ -0.66
CHD2-211ENST00000627460 VIRMAQ69YN4 1812 aaKnown RBP10.91□□□□□ -0.66
CHD2-211ENST00000627460 SIPA1L3O60292 1781 aaPredicted RBP10.91□□□□□ -0.66
CHD2-211ENST00000627460 CCT4P50991 539 aaKnown RBP10.91□□□□□ -0.66
CHD2-211ENST00000627460 CABP4P57796 275 aa10.91□□□□□ -0.66
CHD2-211ENST00000627460 LARP1Q6PKG0 1096 aaKnown RBP10.91□□□□□ -0.66
CHD2-211ENST00000627460 POTEHQ6S545 545 aa10.91□□□□□ -0.66
CHD2-211ENST00000627460 DBF4Q9UBU7 674 aaPredicted RBP10.91□□□□□ -0.66
CHD2-211ENST00000627460 HDAC5Q9UQL6 1122 aa10.91□□□□□ -0.66
CHD2-211ENST00000627460 PXDNLA1KZ92 1463 aa10.9□□□□□ -0.66
CHD2-211ENST00000627460 PSEN1P49768 467 aa10.9□□□□□ -0.66
CHD2-211ENST00000627460 INTS3Q68E01 1043 aaKnown RBP10.9□□□□□ -0.66
CHD2-211ENST00000627460 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
CHD2-211ENST00000627460 MIS18AQ9NYP9 233 aa10.9□□□□□ -0.66
CHD2-211ENST00000627460 EXOC5O00471 708 aa10.89□□□□□ -0.67
CHD2-211ENST00000627460 TCERG1O14776 1098 aaKnown RBP10.89□□□□□ -0.67
CHD2-211ENST00000627460 CYP27B1O15528 508 aa10.89□□□□□ -0.67
CHD2-211ENST00000627460 TMEM57Q8N5G2 664 aa10.89□□□□□ -0.67
CHD2-211ENST00000627460 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
CHD2-211ENST00000627460 KDM6AO15550 1401 aaPredicted RBP10.89□□□□□ -0.67
CHD2-211ENST00000627460 HEG1Q9ULI3 1381 aa10.89□□□□□ -0.67
CHD2-211ENST00000627460 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 LRP6O75581 1613 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 DISP2A7MBM2 1401 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 DDX58O95786 925 aaKnown RBP10.88□□□□□ -0.67
CHD2-211ENST00000627460 RLBP1P12271 317 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 FLIIQ13045 1269 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 HDAC1Q13547 482 aaPredicted RBP10.88□□□□□ -0.67
CHD2-211ENST00000627460 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 ZBTB40Q9NUA8 1239 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 HYPKQ9NX55 129 aa10.88□□□□□ -0.67
CHD2-211ENST00000627460 TNS2Q63HR2 1409 aa10.87□□□□□ -0.67
CHD2-211ENST00000627460 GIGYF1O75420 1035 aaPredicted RBP10.87□□□□□ -0.67
CHD2-211ENST00000627460 SNRPA1P09661 255 aaKnown RBP10.87□□□□□ -0.67
CHD2-211ENST00000627460 FKBP5Q13451 457 aaPredicted RBP10.87□□□□□ -0.67
CHD2-211ENST00000627460 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
CHD2-211ENST00000627460 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
CHD2-211ENST00000627460 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
CHD2-211ENST00000627460 SLIT2O94813 1529 aa10.87□□□□□ -0.67
CHD2-211ENST00000627460 NRAPQ86VF7 1730 aa10.87□□□□□ -0.67
CHD2-211ENST00000627460 MAP3K13O43283 966 aa10.86□□□□□ -0.67
CHD2-211ENST00000627460 ADAMTS2O95450 1211 aa10.86□□□□□ -0.67
CHD2-211ENST00000627460 GNAI3P08754 354 aa10.86□□□□□ -0.67
CHD2-211ENST00000627460 KRT24Q2M2I5 525 aa10.86□□□□□ -0.67
CHD2-211ENST00000627460 IFNL1Q8IU54 200 aa10.86□□□□□ -0.67
CHD2-211ENST00000627460 WNK3Q9BYP7 1800 aa10.86□□□□□ -0.67
CHD2-211ENST00000627460 SPATA31A1Q5TZJ5 1347 aa10.85□□□□□ -0.67
CHD2-211ENST00000627460 NUTM2BA6NNL0 878 aaPredicted RBP10.85□□□□□ -0.67
CHD2-211ENST00000627460 NUTM2EB1AL46 878 aaPredicted RBP10.85□□□□□ -0.67
CHD2-211ENST00000627460 ZBTB7BO15156 539 aaPredicted RBP10.85□□□□□ -0.67
CHD2-211ENST00000627460 HMMRO75330 724 aa10.85□□□□□ -0.67
CHD2-211ENST00000627460 NBR1Q14596 966 aa10.85□□□□□ -0.67
CHD2-211ENST00000627460 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
CHD2-211ENST00000627460 NUTM2AQ8IVF1 878 aaPredicted RBP10.85□□□□□ -0.67
CHD2-211ENST00000627460 DDX54Q8TDD1 881 aaKnown RBP10.85□□□□□ -0.67
CHD2-211ENST00000627460 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHD2-211ENST00000627460 TMOD3Q9NYL9 352 aa10.85□□□□□ -0.67
CHD2-211ENST00000627460 IBTKQ9P2D0 1353 aaPredicted RBP10.85□□□□□ -0.67
CHD2-211ENST00000627460 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 EIF2S2P20042 333 aaKnown RBP10.84□□□□□ -0.67
CHD2-211ENST00000627460 DDB1Q16531 1140 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 RPAP2Q8IXW5 612 aaPredicted RBP10.84□□□□□ -0.67
CHD2-211ENST00000627460 GCC1Q96CN9 775 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 NGLY1Q96IV0 654 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 MFRPQ9BY79 579 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 USP35Q9P2H5 1018 aa10.84□□□□□ -0.67
CHD2-211ENST00000627460 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.84□□□□□ -0.67
CHD2-211ENST00000627460 N4BP2Q86UW6 1770 aaPredicted RBP10.83□□□□□ -0.68
CHD2-211ENST00000627460 VPS72Q15906 364 aa10.83□□□□□ -0.68
CHD2-211ENST00000627460 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
CHD2-211ENST00000627460 CCDC9Q9Y3X0 531 aaKnown RBP10.83□□□□□ -0.68
CHD2-211ENST00000627460 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
CHD2-211ENST00000627460 RGS12O14924 1447 aa10.83□□□□□ -0.68
CHD2-211ENST00000627460 LAMB4A4D0S4 1761 aa10.82□□□□□ -0.68
CHD2-211ENST00000627460 CHPF2Q9P2E5 772 aa10.82□□□□□ -0.68
CHD2-211ENST00000627460 TNNQ9UQP3 1299 aa10.82□□□□□ -0.68
CHD2-211ENST00000627460 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
CHD2-211ENST00000627460 PAPPAQ13219 1627 aa10.81□□□□□ -0.68
CHD2-211ENST00000627460 ALDH1L1O75891 902 aa10.81□□□□□ -0.68
CHD2-211ENST00000627460 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
CHD2-211ENST00000627460 MEX3CQ5U5Q3 659 aaKnown RBP10.81□□□□□ -0.68
CHD2-211ENST00000627460 SLC4A10Q6U841 1118 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms