RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	SCUBE2	Q9NQ36	999 aa		10.83	□□□□□ -0.68
TCF4-256	ENST00000626631	KIF13B	Q9NQT8	1826 aa		10.83	□□□□□ -0.68
TCF4-256	ENST00000626631	CIC	Q96RK0	1608 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF4-256	ENST00000626631	KDM6A	O15550	1401 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF4-256	ENST00000626631	CLSPN	Q9HAW4	1339 aa		10.83	□□□□□ -0.68
TCF4-256	ENST00000626631	PCNT	O95613	3336 aa		10.83	□□□□□ -0.68
TCF4-256	ENST00000626631	KIAA1551	Q9HCM1	1747 aa		10.82	□□□□□ -0.68
TCF4-256	ENST00000626631	KCNA3	P22001	575 aa		10.82	□□□□□ -0.68
TCF4-256	ENST00000626631	C10orf71	Q711Q0	1435 aa		10.82	□□□□□ -0.68
TCF4-256	ENST00000626631	DPEP1	P16444	411 aa		10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	RFC4	P35249	363 aa		10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	MTHFS	P49914	203 aa		10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	CABP4	P57796	275 aa		10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	ASTL	Q6HA08	431 aa	Predicted RBP	10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	AEBP1	Q8IUX7	1158 aa		10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	NFATC2IP	Q8NCF5	419 aa		10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	POLR3GL	Q9BT43	218 aa		10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	MYH14	Q7Z406	1995 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-256	ENST00000626631	HSPA5	P11021	654 aa	Known RBP	10.8	□□□□□ -0.68
TCF4-256	ENST00000626631	CCDC87	Q9NVE4	849 aa		10.8	□□□□□ -0.68
TCF4-256	ENST00000626631	BCS1L	Q9Y276	419 aa		10.8	□□□□□ -0.68
TCF4-256	ENST00000626631	PARP3	Q9Y6F1	533 aa		10.8	□□□□□ -0.68
TCF4-256	ENST00000626631	COL5A3	P25940	1745 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF4-256	ENST00000626631	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.8	□□□□□ -0.68
TCF4-256	ENST00000626631	PTCD1	O75127	700 aa	Known RBP	10.79	□□□□□ -0.68
TCF4-256	ENST00000626631	IL13	P35225	146 aa		10.79	□□□□□ -0.68
TCF4-256	ENST00000626631	CRKL	P46109	303 aa	Known RBP	10.79	□□□□□ -0.68
TCF4-256	ENST00000626631	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
TCF4-256	ENST00000626631	ARHGAP27	Q6ZUM4	889 aa		10.79	□□□□□ -0.68
TCF4-256	ENST00000626631	DNAJC5G	Q8N7S2	189 aa		10.79	□□□□□ -0.68
TCF4-256	ENST00000626631	C4A	P0C0L4	1744 aa		10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	ATMIN	O43313	823 aa	Predicted RBP	10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	TOMM70	O94826	608 aa		10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	FCHSD2	O94868	740 aa		10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	TM4SF1	P30408	202 aa		10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	FKBP8	Q14318	412 aa		10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	SULT6B1	Q6IMI4	303 aa		10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	INTS5	Q6P9B9	1019 aa	Known RBP	10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	MORC1	Q86VD1	984 aa		10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	SRP68	Q9UHB9	627 aa	Known RBP	10.78	□□□□□ -0.68
TCF4-256	ENST00000626631	DDR1	Q08345	913 aa		10.77	□□□□□ -0.69
TCF4-256	ENST00000626631	C1orf141	Q5JVX7	400 aa		10.77	□□□□□ -0.69
TCF4-256	ENST00000626631	MS4A3	Q96HJ5	214 aa		10.77	□□□□□ -0.69
TCF4-256	ENST00000626631	PIM2	Q9P1W9	311 aa		10.77	□□□□□ -0.69
TCF4-256	ENST00000626631	USP42	Q9H9J4	1324 aa	Known RBP	10.77	□□□□□ -0.69
TCF4-256	ENST00000626631	MNX1	P50219	401 aa	Predicted RBP	10.76	□□□□□ -0.69
TCF4-256	ENST00000626631	APLP1	P51693	650 aa		10.76	□□□□□ -0.69
TCF4-256	ENST00000626631	AKAP4	Q5JQC9	854 aa		10.76	□□□□□ -0.69
TCF4-256	ENST00000626631	LGR6	Q9HBX8	967 aa		10.76	□□□□□ -0.69
TCF4-256	ENST00000626631	NMRK2	Q9NPI5	230 aa		10.76	□□□□□ -0.69
TCF4-256	ENST00000626631	BRCA1	P38398	1863 aa	Known RBP	10.76	□□□□□ -0.69
TCF4-256	ENST00000626631	POLRMT	O00411	1230 aa	Known RBP	10.75	□□□□□ -0.69
TCF4-256	ENST00000626631	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.75	□□□□□ -0.69
TCF4-256	ENST00000626631	C9orf131	Q5VYM1	1079 aa		10.75	□□□□□ -0.69
TCF4-256	ENST00000626631	PCGF6	Q9BYE7	350 aa		10.75	□□□□□ -0.69
TCF4-256	ENST00000626631	ADAMTS7	Q9UKP4	1686 aa		10.74	□□□□□ -0.69
TCF4-256	ENST00000626631	CYP19A1	P11511	503 aa	Predicted RBP	10.74	□□□□□ -0.69
TCF4-256	ENST00000626631	DALRD3	Q5D0E6	543 aa	Known RBP	10.74	□□□□□ -0.69
TCF4-256	ENST00000626631	DNAJC10	Q8IXB1	793 aa		10.74	□□□□□ -0.69
TCF4-256	ENST00000626631	RBM46	Q8TBY0	533 aa	Known RBP	10.74	□□□□□ -0.69
TCF4-256	ENST00000626631	SLC52A2	Q9HAB3	445 aa		10.74	□□□□□ -0.69
TCF4-256	ENST00000626631	KNSTRN	Q9Y448	316 aa		10.74	□□□□□ -0.69
TCF4-256	ENST00000626631	TJP1	Q07157	1748 aa		10.73	□□□□□ -0.69
TCF4-256	ENST00000626631	ARFGEF1	Q9Y6D6	1849 aa		10.73	□□□□□ -0.69
TCF4-256	ENST00000626631	CHRNA5	P30532	468 aa		10.73	□□□□□ -0.69
TCF4-256	ENST00000626631	USPL1	Q5W0Q7	1092 aa		10.73	□□□□□ -0.69
TCF4-256	ENST00000626631	CDAN1	Q8IWY9	1227 aa		10.73	□□□□□ -0.69
TCF4-256	ENST00000626631	SOS1	Q07889	1333 aa	Predicted RBP	10.73	□□□□□ -0.69
TCF4-256	ENST00000626631	RNMT	O43148	476 aa	Known RBP	10.72	□□□□□ -0.69
TCF4-256	ENST00000626631	ZPR1	O75312	459 aa		10.72	□□□□□ -0.69
TCF4-256	ENST00000626631	SLC39A6	Q13433	755 aa		10.72	□□□□□ -0.69
TCF4-256	ENST00000626631	NARF	Q9UHQ1	456 aa		10.72	□□□□□ -0.69
TCF4-256	ENST00000626631	SCN11A	Q9UI33	1791 aa		10.72	□□□□□ -0.69
TCF4-256	ENST00000626631	PER1	O15534	1290 aa	Predicted RBP	10.71	□□□□□ -0.69
TCF4-256	ENST00000626631	FSTL1	Q12841	308 aa		10.71	□□□□□ -0.69
TCF4-256	ENST00000626631	NFIX	Q14938	502 aa		10.71	□□□□□ -0.69
TCF4-256	ENST00000626631	MTHFSD	Q2M296	383 aa	Known RBP	10.71	□□□□□ -0.69
TCF4-256	ENST00000626631	VSIG10	Q8N0Z9	540 aa		10.71	□□□□□ -0.69
TCF4-256	ENST00000626631	BCL2L12	Q9HB09	334 aa		10.71	□□□□□ -0.69
TCF4-256	ENST00000626631	RNF181	Q9P0P0	153 aa		10.71	□□□□□ -0.69
TCF4-256	ENST00000626631	RRAGC	Q9HB90	399 aa		10.7	□□□□□ -0.7
TCF4-256	ENST00000626631	ZBTB1	Q9Y2K1	713 aa		10.7	□□□□□ -0.7
TCF4-256	ENST00000626631	KCP	Q6ZWJ8	1503 aa		10.69	□□□□□ -0.7
TCF4-256	ENST00000626631	MRC1	P22897	1456 aa		10.69	□□□□□ -0.7
TCF4-256	ENST00000626631	KDM2B	Q8NHM5	1336 aa		10.69	□□□□□ -0.7
TCF4-256	ENST00000626631	HMOX1	P09601	288 aa		10.69	□□□□□ -0.7
TCF4-256	ENST00000626631	PRELP	P51888	382 aa		10.69	□□□□□ -0.7
TCF4-256	ENST00000626631	SBF1	O95248	1867 aa		10.69	□□□□□ -0.7
TCF4-256	ENST00000626631	SERPINB2	P05120	415 aa		10.68	□□□□□ -0.7
TCF4-256	ENST00000626631	EIF5	P55010	431 aa	Known RBP	10.68	□□□□□ -0.7
TCF4-256	ENST00000626631	HTRA3	P83110	453 aa		10.68	□□□□□ -0.7
TCF4-256	ENST00000626631	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.68	□□□□□ -0.7
TCF4-256	ENST00000626631	JMY	Q8N9B5	988 aa		10.68	□□□□□ -0.7
TCF4-256	ENST00000626631	NRXN2	Q9P2S2	1712 aa		10.67	□□□□□ -0.7
TCF4-256	ENST00000626631	COL15A1	P39059	1388 aa		10.67	□□□□□ -0.7
TCF4-256	ENST00000626631	KIF7	Q2M1P5	1343 aa		10.67	□□□□□ -0.7
TCF4-256	ENST00000626631	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.67	□□□□□ -0.7
TCF4-256	ENST00000626631	DIAPH1	O60610	1272 aa	Known RBP	10.67	□□□□□ -0.7
TCF4-256	ENST00000626631	TTLL6	Q8N841	843 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms