RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 TM4SF1P30408 202 aa25.71■■□□□ 1.71
ATG4B-226ENST00000625810 VSIG10Q8N0Z9 540 aa25.71■■□□□ 1.71
ATG4B-226ENST00000625810 ZBTB1Q9Y2K1 713 aa25.71■■□□□ 1.71
ATG4B-226ENST00000625810 COL15A1P39059 1388 aa25.7■■□□□ 1.71
ATG4B-226ENST00000625810 PRKAR2BP31323 418 aa25.7■■□□□ 1.7
ATG4B-226ENST00000625810 IL17REQ8NFR9 667 aa25.7■■□□□ 1.7
ATG4B-226ENST00000625810 PPP2R1AP30153 589 aa25.69■■□□□ 1.7
ATG4B-226ENST00000625810 ARHGAP27Q6ZUM4 889 aa25.68■■□□□ 1.7
ATG4B-226ENST00000625810 NARFQ9UHQ1 456 aa25.68■■□□□ 1.7
ATG4B-226ENST00000625810 CEP350Q5VT06 3117 aa25.68■■□□□ 1.7
ATG4B-226ENST00000625810 ARFGEF1Q9Y6D6 1849 aa25.67■■□□□ 1.7
ATG4B-226ENST00000625810 SIPA1L3O60292 1781 aaPredicted RBP25.67■■□□□ 1.7
ATG4B-226ENST00000625810 U2AF1L5P0DN76 240 aaPredicted RBP25.67■■□□□ 1.7
ATG4B-226ENST00000625810 U2AF1Q01081 240 aaKnown RBP eCLIP25.67■■□□□ 1.7
ATG4B-226ENST00000625810 PHACTR3Q96KR7 559 aa25.67■■□□□ 1.7
ATG4B-226ENST00000625810 RSPH6AQ9H0K4 717 aa25.67■■□□□ 1.7
ATG4B-226ENST00000625810 PIM2Q9P1W9 311 aa25.67■■□□□ 1.7
ATG4B-226ENST00000625810 STARD3NLO95772 234 aa25.66■■□□□ 1.7
ATG4B-226ENST00000625810 KIF3CO14782 793 aa25.65■■□□□ 1.7
ATG4B-226ENST00000625810 CANXP27824 592 aaKnown RBP25.65■■□□□ 1.7
ATG4B-226ENST00000625810 CHRNA5P30532 468 aa25.65■■□□□ 1.7
ATG4B-226ENST00000625810 NFIXQ14938 502 aa25.65■■□□□ 1.7
ATG4B-226ENST00000625810 ZNF790Q6PG37 636 aa25.65■■□□□ 1.7
ATG4B-226ENST00000625810 BCL2L12Q9HB09 334 aa25.65■■□□□ 1.7
ATG4B-226ENST00000625810 NRXN2Q9P2S2 1712 aa25.64■■□□□ 1.7
ATG4B-226ENST00000625810 DALRD3Q5D0E6 543 aaKnown RBP25.63■■□□□ 1.69
ATG4B-226ENST00000625810 ZNF496Q96IT1 587 aaPredicted RBP25.63■■□□□ 1.69
ATG4B-226ENST00000625810 CEMIPQ8WUJ3 1361 aa25.62■■□□□ 1.69
ATG4B-226ENST00000625810 HEG1Q9ULI3 1381 aa25.62■■□□□ 1.69
ATG4B-226ENST00000625810 TEX13AQ9BXU3 409 aaPredicted RBP25.62■■□□□ 1.69
ATG4B-226ENST00000625810 AFDNP55196 1824 aaKnown RBP25.62■■□□□ 1.69
ATG4B-226ENST00000625810 EIF5P55010 431 aaKnown RBP25.6■■□□□ 1.69
ATG4B-226ENST00000625810 RTF1Q92541 710 aaKnown RBP25.6■■□□□ 1.69
ATG4B-226ENST00000625810 FMNL2Q96PY5 1086 aa25.6■■□□□ 1.69
ATG4B-226ENST00000625810 A0A087WZG4 1122 aa25.59■■□□□ 1.69
ATG4B-226ENST00000625810 BTBD11A6QL63 1104 aa25.59■■□□□ 1.69
ATG4B-226ENST00000625810 HSPA6P17066 643 aa25.59■■□□□ 1.69
ATG4B-226ENST00000625810 C9orf131Q5VYM1 1079 aa25.58■■□□□ 1.69
ATG4B-226ENST00000625810 SERPINB2P05120 415 aa25.57■■□□□ 1.68
ATG4B-226ENST00000625810 ZNF330Q9Y3S2 320 aaPredicted RBP25.57■■□□□ 1.68
ATG4B-226ENST00000625810 SCN7AQ01118 1682 aa25.57■■□□□ 1.68
ATG4B-226ENST00000625810 NPM2Q86SE8 214 aaKnown RBP25.56■■□□□ 1.68
ATG4B-226ENST00000625810 CARMIL3Q8ND23 1372 aa25.56■■□□□ 1.68
ATG4B-226ENST00000625810 DLEC1Q9Y238 1755 aa25.55■■□□□ 1.68
ATG4B-226ENST00000625810 KCNQ3O43525 872 aa25.54■■□□□ 1.68
ATG4B-226ENST00000625810 NEFMP07197 916 aa25.54■■□□□ 1.68
ATG4B-226ENST00000625810 BICDL1Q6ZP65 573 aa25.54■■□□□ 1.68
ATG4B-226ENST00000625810 MCM10Q7L590 875 aa25.54■■□□□ 1.68
ATG4B-226ENST00000625810 NMRK2Q9NPI5 230 aa25.53■■□□□ 1.68
ATG4B-226ENST00000625810 A1BGP04217 495 aa25.52■■□□□ 1.68
ATG4B-226ENST00000625810 IL6STP40189 918 aaPredicted RBP25.52■■□□□ 1.68
ATG4B-226ENST00000625810 RNF181Q9P0P0 153 aa25.52■■□□□ 1.68
ATG4B-226ENST00000625810 TBC1D2BQ9UPU7 963 aa25.52■■□□□ 1.68
ATG4B-226ENST00000625810 TBC1D9BQ66K14 1250 aa25.51■■□□□ 1.67
ATG4B-226ENST00000625810 HTATSF1O43719 755 aaKnown RBP25.5■■□□□ 1.67
ATG4B-226ENST00000625810 DCTN1Q14203 1278 aa25.5■■□□□ 1.67
ATG4B-226ENST00000625810 TOMM70O94826 608 aa25.49■■□□□ 1.67
ATG4B-226ENST00000625810 C2CD5Q86YS7 1000 aa25.49■■□□□ 1.67
ATG4B-226ENST00000625810 SBF1O95248 1867 aa25.49■■□□□ 1.67
ATG4B-226ENST00000625810 RASSF7Q02833 373 aa25.48■■□□□ 1.67
ATG4B-226ENST00000625810 USP16Q9Y5T5 823 aa25.48■■□□□ 1.67
ATG4B-226ENST00000625810 ANKRD31Q8N7Z5 1873 aa25.48■■□□□ 1.67
ATG4B-226ENST00000625810 SNRPA1P09661 255 aaKnown RBP25.47■■□□□ 1.67
ATG4B-226ENST00000625810 TTLL6Q8N841 843 aa25.47■■□□□ 1.67
ATG4B-226ENST00000625810 H0YIN7 160 aa25.46■■□□□ 1.67
ATG4B-226ENST00000625810 CAMTA2O94983 1202 aa25.46■■□□□ 1.67
ATG4B-226ENST00000625810 BCORQ6W2J9 1755 aa25.46■■□□□ 1.67
ATG4B-226ENST00000625810 PRAMEF22A3QJZ6 481 aa25.45■■□□□ 1.66
ATG4B-226ENST00000625810 TAF7Q15545 349 aaPredicted RBP25.45■■□□□ 1.66
ATG4B-226ENST00000625810 PRR5LQ6MZQ0 368 aa25.45■■□□□ 1.66
ATG4B-226ENST00000625810 KDM2BQ8NHM5 1336 aa25.44■■□□□ 1.66
ATG4B-226ENST00000625810 COL11A2P13942 1736 aaPredicted RBP25.44■■□□□ 1.66
ATG4B-226ENST00000625810 PRELPP51888 382 aa25.44■■□□□ 1.66
ATG4B-226ENST00000625810 DZIP3Q86Y13 1208 aaKnown RBP25.44■■□□□ 1.66
ATG4B-226ENST00000625810 PIP4K2AP48426 406 aaPredicted RBP25.43■■□□□ 1.66
ATG4B-226ENST00000625810 BRIP1Q9BX63 1249 aa25.43■■□□□ 1.66
ATG4B-226ENST00000625810 PNNQ9H307 717 aaKnown RBP25.43■■□□□ 1.66
ATG4B-226ENST00000625810 NPHP1O15259 732 aa25.42■■□□□ 1.66
ATG4B-226ENST00000625810 CCDC24Q8N4L8 307 aa25.42■■□□□ 1.66
ATG4B-226ENST00000625810 SETDB2Q96T68 719 aa25.42■■□□□ 1.66
ATG4B-226ENST00000625810 PDE6BP35913 854 aa25.41■■□□□ 1.66
ATG4B-226ENST00000625810 RBM46Q8TBY0 533 aaKnown RBP25.41■■□□□ 1.66
ATG4B-226ENST00000625810 MIS18AQ9NYP9 233 aa25.41■■□□□ 1.66
ATG4B-226ENST00000625810 TNRC6CQ9HCJ0 1690 aaKnown RBP25.41■■□□□ 1.66
ATG4B-226ENST00000625810 ZC3H4Q9UPT8 1303 aaKnown RBP25.4■■□□□ 1.66
ATG4B-226ENST00000625810 NFKBIEO00221 500 aa25.4■■□□□ 1.66
ATG4B-226ENST00000625810 LMNB1P20700 586 aa25.4■■□□□ 1.66
ATG4B-226ENST00000625810 APLP1P51693 650 aa25.4■■□□□ 1.66
ATG4B-226ENST00000625810 PDZRN3Q9UPQ7 1066 aa25.4■■□□□ 1.66
ATG4B-226ENST00000625810 MAPK8IP3Q9UPT6 1336 aa25.39■■□□□ 1.66
ATG4B-226ENST00000625810 DLG5Q8TDM6 1919 aa25.39■■□□□ 1.66
ATG4B-226ENST00000625810 PNISRQ8TF01 805 aaKnown RBP25.39■■□□□ 1.66
ATG4B-226ENST00000625810 ZNF622Q969S3 477 aaKnown RBP eCLIP25.39■■□□□ 1.666e-7■■■□□ 14.6
ATG4B-226ENST00000625810 PLEKHF1Q96S99 279 aa25.39■■□□□ 1.66
ATG4B-226ENST00000625810 NFE2L2Q16236 605 aa25.38■■□□□ 1.65
ATG4B-226ENST00000625810 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
ATG4B-226ENST00000625810 CNBD1Q8NA66 436 aa25.38■■□□□ 1.65
ATG4B-226ENST00000625810 RRAGCQ9HB90 399 aa25.38■■□□□ 1.65
ATG4B-226ENST00000625810 TIAM2Q8IVF5 1701 aa25.37■■□□□ 1.65
ATG4B-226ENST00000625810 RALBP1Q15311 655 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms