RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 MARCH10Q8NA82 808 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-221ENST00000625705 SYTL4Q96C24 671 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-221ENST00000625705 PARD3Q8TEW0 1356 aa9.66□□□□□ -0.86
NPLOC4-221ENST00000625705 PKD1L3Q7Z443 1732 aa9.66□□□□□ -0.86
NPLOC4-221ENST00000625705 TNS1Q9HBL0 1735 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-221ENST00000625705 APBA3O96018 575 aa9.66□□□□□ -0.86
NPLOC4-221ENST00000625705 HMOX1P09601 288 aa9.66□□□□□ -0.86
NPLOC4-221ENST00000625705 RALBP1Q15311 655 aa9.66□□□□□ -0.86
NPLOC4-221ENST00000625705 ACSBG1Q96GR2 724 aa9.66□□□□□ -0.86
NPLOC4-221ENST00000625705 DOT1LQ8TEK3 1739 aa9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 NEFMP07197 916 aa9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 IL13P35225 146 aa9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 LSM11P83369 360 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 PLEKHO1Q53GL0 409 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 POTEEQ6S8J3 1075 aa9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 CRISPLD2Q9H0B8 497 aa9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 SBF2Q86WG5 1849 aa9.65□□□□□ -0.86
NPLOC4-221ENST00000625705 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.87
NPLOC4-221ENST00000625705 NCAPD2Q15021 1401 aa9.65□□□□□ -0.87
NPLOC4-221ENST00000625705 NHSQ6T4R5 1651 aa9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 MYBBP1AQ9BQG0 1328 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 TBC1D12O60347 775 aa9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 ZNF530Q6P9A1 599 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 DEFB132Q7Z7B7 95 aa9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 AEBP1Q8IUX7 1158 aa9.64□□□□□ -0.87
NPLOC4-221ENST00000625705 KAT6BQ8WYB5 2073 aa9.63□□□□□ -0.87
NPLOC4-221ENST00000625705 ANP32CO43423 234 aa9.63□□□□□ -0.87
NPLOC4-221ENST00000625705 PBX2P40425 430 aa9.63□□□□□ -0.87
NPLOC4-221ENST00000625705 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-221ENST00000625705 AMOTQ4VCS5 1084 aa9.63□□□□□ -0.87
NPLOC4-221ENST00000625705 COL3A1P02461 1466 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-221ENST00000625705 PPP1R15BQ5SWA1 713 aa9.62□□□□□ -0.87
NPLOC4-221ENST00000625705 IFNL2Q8IZJ0 200 aa9.62□□□□□ -0.87
NPLOC4-221ENST00000625705 BCL9O00512 1426 aa9.62□□□□□ -0.87
NPLOC4-221ENST00000625705 BTAF1O14981 1849 aa9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 PSDA5PKW4 1024 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 PDE4AP27815 886 aa9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 KDRP35968 1356 aa9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 PLEKHG2Q9H7P9 1386 aa9.61□□□□□ -0.87
NPLOC4-221ENST00000625705 CYP27B1O15528 508 aa9.6□□□□□ -0.87
NPLOC4-221ENST00000625705 KCNQ2O43526 872 aa9.6□□□□□ -0.87
NPLOC4-221ENST00000625705 PHKG2P15735 406 aa9.6□□□□□ -0.87
NPLOC4-221ENST00000625705 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
NPLOC4-221ENST00000625705 EZH2Q15910 746 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-221ENST00000625705 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
NPLOC4-221ENST00000625705 PRKRIP1Q9H875 184 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-221ENST00000625705 MAPK8IP3Q9UPT6 1336 aa9.59□□□□□ -0.87
NPLOC4-221ENST00000625705 MPRIPQ6WCQ1 1025 aa9.59□□□□□ -0.87
NPLOC4-221ENST00000625705 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-221ENST00000625705 TMOD3Q9NYL9 352 aa9.59□□□□□ -0.87
NPLOC4-221ENST00000625705 RGPD3A6NKT7 1758 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-221ENST00000625705 RGPD4Q7Z3J3 1758 aa9.59□□□□□ -0.87
NPLOC4-221ENST00000625705 ARHGAP33O14559 1287 aa9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 PTGER2P43116 358 aa9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 CABP4P57796 275 aa9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 PTF1AQ7RTS3 328 aa9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 TOGARAM1Q9Y4F4 1720 aa9.58□□□□□ -0.88
NPLOC4-221ENST00000625705 ITGB4P16144 1822 aa9.57□□□□□ -0.88
NPLOC4-221ENST00000625705 AKAP4Q5JQC9 854 aa9.57□□□□□ -0.88
NPLOC4-221ENST00000625705 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
NPLOC4-221ENST00000625705 RSPH6AQ9H0K4 717 aa9.57□□□□□ -0.88
NPLOC4-221ENST00000625705 RREB1Q92766 1687 aa9.57□□□□□ -0.88
NPLOC4-221ENST00000625705 NUP188Q5SRE5 1749 aa9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 MAP3K5Q99683 1374 aa9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 PLSCR1O15162 318 aa9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 FCHSD2O94868 740 aa9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 MTHFSDQ2M296 383 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 PPP4R3BQ5MIZ7 849 aa9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 RTF1Q92541 710 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 SMARCC1Q92922 1105 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 CAMKK2Q96RR4 588 aa9.56□□□□□ -0.88
NPLOC4-221ENST00000625705 PALLDQ8WX93 1383 aa9.55□□□□□ -0.88
NPLOC4-221ENST00000625705 GNAT3A8MTJ3 354 aa9.55□□□□□ -0.88
NPLOC4-221ENST00000625705 PSEN2P49810 448 aa9.55□□□□□ -0.88
NPLOC4-221ENST00000625705 TXNRD1Q16881 649 aa9.55□□□□□ -0.88
NPLOC4-221ENST00000625705 DDX27Q96GQ7 796 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-221ENST00000625705 KDM6AO15550 1401 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-221ENST00000625705 SCN11AQ9UI33 1791 aa9.55□□□□□ -0.88
NPLOC4-221ENST00000625705 VIRMAQ69YN4 1812 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-221ENST00000625705 ERVV-2B6SEH9 535 aa9.54□□□□□ -0.88
NPLOC4-221ENST00000625705 TEFQ10587 303 aa9.54□□□□□ -0.88
NPLOC4-221ENST00000625705 MRS2Q9HD23 443 aa9.54□□□□□ -0.88
NPLOC4-221ENST00000625705 STK32BQ9NY57 414 aa9.54□□□□□ -0.88
NPLOC4-221ENST00000625705 CCNL1Q9UK58 526 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-221ENST00000625705 R3HDM1Q15032 1099 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-221ENST00000625705 SLC27A3Q5K4L6 730 aa9.53□□□□□ -0.88
NPLOC4-221ENST00000625705 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
NPLOC4-221ENST00000625705 PIGBQ92521 554 aa9.53□□□□□ -0.88
NPLOC4-221ENST00000625705 LY75O60449 1722 aa9.53□□□□□ -0.88
NPLOC4-221ENST00000625705 RNMTO43148 476 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms