RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 NARFQ9UHQ1 456 aa25.61■■□□□ 1.69
SMN1-211ENST00000625245 ZBTB1Q9Y2K1 713 aa25.61■■□□□ 1.69
SMN1-211ENST00000625245 KCPQ6ZWJ8 1503 aa25.61■■□□□ 1.69
SMN1-211ENST00000625245 U2SURPO15042 1029 aaKnown RBP25.6■■□□□ 1.69
SMN1-211ENST00000625245 COL15A1P39059 1388 aa25.59■■□□□ 1.69
SMN1-211ENST00000625245 TOMM70O94826 608 aa25.59■■□□□ 1.69
SMN1-211ENST00000625245 CANXP27824 592 aaKnown RBP25.59■■□□□ 1.69
SMN1-211ENST00000625245 NFIXQ14938 502 aa25.59■■□□□ 1.69
SMN1-211ENST00000625245 TTC5Q8N0Z6 440 aa25.59■■□□□ 1.69
SMN1-211ENST00000625245 AFDNP55196 1824 aaKnown RBP25.58■■□□□ 1.69
SMN1-211ENST00000625245 VSIG10Q8N0Z9 540 aa25.58■■□□□ 1.69
SMN1-211ENST00000625245 RNF181Q9P0P0 153 aa25.58■■□□□ 1.69
SMN1-211ENST00000625245 STARD3NLO95772 234 aa25.55■■□□□ 1.68
SMN1-211ENST00000625245 SERPINB2P05120 415 aa25.55■■□□□ 1.68
SMN1-211ENST00000625245 BCL2L12Q9HB09 334 aa25.55■■□□□ 1.68
SMN1-211ENST00000625245 APLP1P51693 650 aa25.54■■□□□ 1.68
SMN1-211ENST00000625245 TEFQ10587 303 aa25.54■■□□□ 1.68
SMN1-211ENST00000625245 C16orf71Q8IYS4 520 aaPredicted RBP25.54■■□□□ 1.68
SMN1-211ENST00000625245 UBR2Q8IWV8 1755 aa25.54■■□□□ 1.68
SMN1-211ENST00000625245 SBF1O95248 1867 aa25.53■■□□□ 1.68
SMN1-211ENST00000625245 GNAT3A8MTJ3 354 aa25.53■■□□□ 1.68
SMN1-211ENST00000625245 BICDL1Q6ZP65 573 aa25.53■■□□□ 1.68
SMN1-211ENST00000625245 GAS2L2Q8NHY3 880 aa25.53■■□□□ 1.68
SMN1-211ENST00000625245 IL17REQ8NFR9 667 aa25.52■■□□□ 1.68
SMN1-211ENST00000625245 COL3A1P02461 1466 aaPredicted RBP25.52■■□□□ 1.68
SMN1-211ENST00000625245 IFFO2Q5TF58 517 aa25.51■■□□□ 1.67
SMN1-211ENST00000625245 ZNF496Q96IT1 587 aaPredicted RBP25.51■■□□□ 1.67
SMN1-211ENST00000625245 ZNF330Q9Y3S2 320 aaPredicted RBP25.51■■□□□ 1.67
SMN1-211ENST00000625245 KDM2BQ8NHM5 1336 aa25.51■■□□□ 1.67
SMN1-211ENST00000625245 NPC1L1Q9UHC9 1359 aa25.51■■□□□ 1.67
SMN1-211ENST00000625245 A0A087WZG4 1122 aa25.5■■□□□ 1.67
SMN1-211ENST00000625245 NRXN2Q9P2S2 1712 aa25.49■■□□□ 1.67
SMN1-211ENST00000625245 EIF5P55010 431 aaKnown RBP25.49■■□□□ 1.67
SMN1-211ENST00000625245 RASSF7Q02833 373 aa25.49■■□□□ 1.67
SMN1-211ENST00000625245 ZNF790Q6PG37 636 aa25.49■■□□□ 1.67
SMN1-211ENST00000625245 C2CD5Q86YS7 1000 aa25.49■■□□□ 1.67
SMN1-211ENST00000625245 RBM46Q8TBY0 533 aaKnown RBP25.49■■□□□ 1.67
SMN1-211ENST00000625245 RRAGCQ9HB90 399 aa25.49■■□□□ 1.67
SMN1-211ENST00000625245 TTLL6Q8N841 843 aa25.48■■□□□ 1.67
SMN1-211ENST00000625245 TEX13AQ9BXU3 409 aaPredicted RBP25.48■■□□□ 1.67
SMN1-211ENST00000625245 HEG1Q9ULI3 1381 aa25.47■■□□□ 1.67
SMN1-211ENST00000625245 H0YIN7 160 aa25.47■■□□□ 1.67
SMN1-211ENST00000625245 TBC1D2BQ9UPU7 963 aa25.46■■□□□ 1.67
SMN1-211ENST00000625245 TBC1D9BQ66K14 1250 aa25.45■■□□□ 1.66
SMN1-211ENST00000625245 CFAP53Q96M91 514 aa25.45■■□□□ 1.66
SMN1-211ENST00000625245 SIPA1L3O60292 1781 aaPredicted RBP25.45■■□□□ 1.66
SMN1-211ENST00000625245 DLEC1Q9Y238 1755 aa25.45■■□□□ 1.66
SMN1-211ENST00000625245 CCDC88AQ3V6T2 1871 aa25.45■■□□□ 1.66
SMN1-211ENST00000625245 CARMIL3Q8ND23 1372 aa25.44■■□□□ 1.66
SMN1-211ENST00000625245 PRKAR2BP31323 418 aa25.44■■□□□ 1.66
SMN1-211ENST00000625245 NPM2Q86SE8 214 aaKnown RBP25.44■■□□□ 1.66
SMN1-211ENST00000625245 PHACTR3Q96KR7 559 aa25.44■■□□□ 1.66
SMN1-211ENST00000625245 FMNL2Q96PY5 1086 aa25.44■■□□□ 1.66
SMN1-211ENST00000625245 LMNB1P20700 586 aa25.43■■□□□ 1.66
SMN1-211ENST00000625245 BTBD11A6QL63 1104 aa25.42■■□□□ 1.66
SMN1-211ENST00000625245 A1BGP04217 495 aa25.42■■□□□ 1.66
SMN1-211ENST00000625245 CCDC24Q8N4L8 307 aa25.42■■□□□ 1.66
SMN1-211ENST00000625245 DNAJC5GQ8N7S2 189 aa25.42■■□□□ 1.66
SMN1-211ENST00000625245 ZNF622Q969S3 477 aaKnown RBP eCLIP25.42■■□□□ 1.66
SMN1-211ENST00000625245 KCNQ3O43525 872 aa25.41■■□□□ 1.66
SMN1-211ENST00000625245 IL6STP40189 918 aaPredicted RBP25.41■■□□□ 1.66
SMN1-211ENST00000625245 FSTL1Q12841 308 aa25.41■■□□□ 1.66
SMN1-211ENST00000625245 TNRC6CQ9HCJ0 1690 aaKnown RBP25.4■■□□□ 1.66
SMN1-211ENST00000625245 RSPH6AQ9H0K4 717 aa25.4■■□□□ 1.66
SMN1-211ENST00000625245 NUDCQ9Y266 331 aa25.4■■□□□ 1.66
SMN1-211ENST00000625245 WDR90Q96KV7 1748 aa25.4■■□□□ 1.66
SMN1-211ENST00000625245 PRELPP51888 382 aa25.39■■□□□ 1.66
SMN1-211ENST00000625245 HTRA3P83110 453 aa25.39■■□□□ 1.66
SMN1-211ENST00000625245 ZNF219Q9P2Y4 722 aaPredicted RBP25.39■■□□□ 1.66
SMN1-211ENST00000625245 ANKRD31Q8N7Z5 1873 aa25.38■■□□□ 1.65
SMN1-211ENST00000625245 NPHP1O15259 732 aa25.38■■□□□ 1.65
SMN1-211ENST00000625245 PDE6BP35913 854 aa25.38■■□□□ 1.65
SMN1-211ENST00000625245 PRR5LQ6MZQ0 368 aa25.38■■□□□ 1.65
SMN1-211ENST00000625245 BRIP1Q9BX63 1249 aa25.38■■□□□ 1.65
SMN1-211ENST00000625245 CEMIPQ8WUJ3 1361 aa25.38■■□□□ 1.65
SMN1-211ENST00000625245 SCN7AQ01118 1682 aa25.38■■□□□ 1.65
SMN1-211ENST00000625245 ZC3H4Q9UPT8 1303 aaKnown RBP25.37■■□□□ 1.65
SMN1-211ENST00000625245 U2AF1L5P0DN76 240 aaPredicted RBP25.37■■□□□ 1.65
SMN1-211ENST00000625245 U2AF1Q01081 240 aaKnown RBP eCLIP25.37■■□□□ 1.65
SMN1-211ENST00000625245 SETDB2Q96T68 719 aa25.37■■□□□ 1.65
SMN1-211ENST00000625245 PDZRN3Q9UPQ7 1066 aa25.36■■□□□ 1.65
SMN1-211ENST00000625245 GLTPD2A6NH11 291 aa25.35■■□□□ 1.65
SMN1-211ENST00000625245 NFKBIEO00221 500 aa25.35■■□□□ 1.65
SMN1-211ENST00000625245 C21orf2O43822 256 aa25.35■■□□□ 1.65
SMN1-211ENST00000625245 CAMTA2O94983 1202 aa25.35■■□□□ 1.65
SMN1-211ENST00000625245 PIP4K2AP48426 406 aaPredicted RBP25.35■■□□□ 1.65
SMN1-211ENST00000625245 SMC1BQ8NDV3 1235 aa25.35■■□□□ 1.65
SMN1-211ENST00000625245 RTF1Q92541 710 aaKnown RBP25.35■■□□□ 1.65
SMN1-211ENST00000625245 USP16Q9Y5T5 823 aa25.35■■□□□ 1.65
SMN1-211ENST00000625245 MCM10Q7L590 875 aa25.34■■□□□ 1.65
SMN1-211ENST00000625245 DZIP3Q86Y13 1208 aaKnown RBP25.34■■□□□ 1.65
SMN1-211ENST00000625245 CNBD1Q8NA66 436 aa25.34■■□□□ 1.65
SMN1-211ENST00000625245 VEGFAP15692 232 aaPredicted RBP25.33■■□□□ 1.65
SMN1-211ENST00000625245 PPP2R1AP30153 589 aa25.33■■□□□ 1.65
SMN1-211ENST00000625245 TIAM2Q8IVF5 1701 aa25.33■■□□□ 1.65
SMN1-211ENST00000625245 PRAMEF22A3QJZ6 481 aa25.32■■□□□ 1.64
SMN1-211ENST00000625245 COL11A2P13942 1736 aaPredicted RBP25.32■■□□□ 1.64
SMN1-211ENST00000625245 ST5P78524 1137 aa25.31■■□□□ 1.64
SMN1-211ENST00000625245 KLRG1Q96E93 195 aa25.31■■□□□ 1.64
SMN1-211ENST00000625245 CACNA1SQ13698 1873 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms