RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 C22orf23Q9BZE7 217 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 MYOM2P54296 1465 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 ALDH1L1O75891 902 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 UTP14AQ9BVJ6 771 aaKnown RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 BABAM1Q9NWV8 329 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 MAP3K12Q12852 859 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 FOXD4L5Q5VV16 416 aaPredicted RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 FOXD4L4Q8WXT5 416 aaPredicted RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 IL13P35225 146 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 ANKRD18AQ8IVF6 992 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 IPO9Q96P70 1041 aaKnown RBP12.21□□□□□ -0.45
SRGAP2-217ENST00000624873 APBA3O96018 575 aa12.21□□□□□ -0.45
SRGAP2-217ENST00000624873 LDHCP07864 332 aa12.21□□□□□ -0.45
SRGAP2-217ENST00000624873 CCDC47Q96A33 483 aaKnown RBP12.21□□□□□ -0.46
SRGAP2-217ENST00000624873 PHACTR3Q96KR7 559 aa12.21□□□□□ -0.46
SRGAP2-217ENST00000624873 TET3O43151 1660 aa12.21□□□□□ -0.46
SRGAP2-217ENST00000624873 KIF1BO60333 1816 aa12.21□□□□□ -0.46
SRGAP2-217ENST00000624873 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
SRGAP2-217ENST00000624873 SHROOM2Q13796 1616 aa12.2□□□□□ -0.46
SRGAP2-217ENST00000624873 RXRBP28702 533 aa12.2□□□□□ -0.46
SRGAP2-217ENST00000624873 DNTTIP2Q5QJE6 756 aaKnown RBP12.2□□□□□ -0.46
SRGAP2-217ENST00000624873 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
SRGAP2-217ENST00000624873 TRIM27P14373 513 aa12.2□□□□□ -0.46
SRGAP2-217ENST00000624873 USP5P45974 858 aa12.19□□□□□ -0.46
SRGAP2-217ENST00000624873 SLC4A3P48751 1232 aa12.19□□□□□ -0.46
SRGAP2-217ENST00000624873 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
SRGAP2-217ENST00000624873 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
SRGAP2-217ENST00000624873 CRACR2BQ8N4Y2 399 aaPredicted RBP12.19□□□□□ -0.46
SRGAP2-217ENST00000624873 VPS37CA5D8V6 355 aaPredicted RBP12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 SPTY2D1Q68D10 685 aaPredicted RBP12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 DDX21Q9NR30 783 aaKnown RBP eCLIP12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 ERVV-2B6SEH9 535 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 MAP3K4Q9Y6R4 1608 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 MX1P20591 662 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 MCM2P49736 904 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 C8orf58Q8NAV2 365 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 UBAC1Q9BSL1 405 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 SLC52A2Q9HAB3 445 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 GRM8O00222 908 aa12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 POLR3DP05423 398 aaPredicted RBP12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.18□□□□□ -0.46
SRGAP2-217ENST00000624873 KIAA0232Q92628 1395 aa12.17□□□□□ -0.46
SRGAP2-217ENST00000624873 KIAA2012Q0VF49 1180 aa12.17□□□□□ -0.46
SRGAP2-217ENST00000624873 BRINP3Q76B58 766 aa12.17□□□□□ -0.46
SRGAP2-217ENST00000624873 CARD10Q9BWT7 1032 aa12.17□□□□□ -0.46
SRGAP2-217ENST00000624873 PARP10Q53GL7 1025 aa12.17□□□□□ -0.46
SRGAP2-217ENST00000624873 BOLA2Q9H3K6 86 aa12.17□□□□□ -0.46
SRGAP2-217ENST00000624873 CYP46A1Q9Y6A2 500 aa12.17□□□□□ -0.46
SRGAP2-217ENST00000624873 HOXB7P09629 217 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 NEK4P51957 841 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 KRT32Q14532 448 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 UQCRFS1P1P0C7P4 283 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 FLAD1Q8NFF5 587 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 CERKQ8TCT0 537 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 INSRP06213 1382 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 STK11IPQ8N1F8 1099 aa12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 HOOK1Q9UJC3 728 aaKnown RBP12.16□□□□□ -0.46
SRGAP2-217ENST00000624873 MYO1BO43795 1136 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 BAG3O95817 575 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 L1TD1Q5T7N2 865 aaKnown RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 FAM196AQ6ZSG2 479 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 PDCP20941 246 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 CNBD1Q8NA66 436 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 JDP2Q8WYK2 163 aa12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 ZC3H12CQ9C0D7 883 aaKnown RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 JARID2Q92833 1246 aaPredicted RBP12.15□□□□□ -0.46
SRGAP2-217ENST00000624873 MKNK2Q9HBH9 465 aa12.15□□□□□ -0.47
SRGAP2-217ENST00000624873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.47
SRGAP2-217ENST00000624873 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 NUCB2P80303 420 aa12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 RABEP1Q15276 862 aa12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 HDAC9Q9UKV0 1011 aa12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 NAPBQ9H115 298 aa12.14□□□□□ -0.47
SRGAP2-217ENST00000624873 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms