RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 DDR1Q08345 913 aa24.43■■□□□ 1.5
PCDHB5-202ENST00000623915 FKBP8Q14318 412 aa24.43■■□□□ 1.5
PCDHB5-202ENST00000623915 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
PCDHB5-202ENST00000623915 LGR6Q9HBX8 967 aa24.43■■□□□ 1.5
PCDHB5-202ENST00000623915 ARFGEF1Q9Y6D6 1849 aa24.42■■□□□ 1.5
PCDHB5-202ENST00000623915 DLG5Q8TDM6 1919 aa24.41■■□□□ 1.5
PCDHB5-202ENST00000623915 DNAJC10Q8IXB1 793 aa24.41■■□□□ 1.5
PCDHB5-202ENST00000623915 PHACTR3Q96KR7 559 aa24.41■■□□□ 1.5
PCDHB5-202ENST00000623915 CEMIPQ8WUJ3 1361 aa24.41■■□□□ 1.5
PCDHB5-202ENST00000623915 HTATSF1O43719 755 aaKnown RBP24.4■■□□□ 1.5
PCDHB5-202ENST00000623915 RNMTO43148 476 aaKnown RBP24.39■■□□□ 1.49
PCDHB5-202ENST00000623915 UBR2Q8IWV8 1755 aa24.39■■□□□ 1.49
PCDHB5-202ENST00000623915 SOS1Q07889 1333 aaPredicted RBP24.38■■□□□ 1.49
PCDHB5-202ENST00000623915 GNAT3A8MTJ3 354 aa24.38■■□□□ 1.49
PCDHB5-202ENST00000623915 HSPA6P17066 643 aa24.38■■□□□ 1.49
PCDHB5-202ENST00000623915 ANP32CO43423 234 aa24.37■■□□□ 1.49
PCDHB5-202ENST00000623915 SLC39A6Q13433 755 aa24.37■■□□□ 1.49
PCDHB5-202ENST00000623915 POLRMTO00411 1230 aaKnown RBP24.36■■□□□ 1.49
PCDHB5-202ENST00000623915 CYP19A1P11511 503 aaPredicted RBP24.36■■□□□ 1.49
PCDHB5-202ENST00000623915 ARHGAP27Q6ZUM4 889 aa24.36■■□□□ 1.49
PCDHB5-202ENST00000623915 TM4SF1P30408 202 aa24.35■■□□□ 1.49
PCDHB5-202ENST00000623915 NRXN2Q9P2S2 1712 aa24.34■■□□□ 1.49
PCDHB5-202ENST00000623915 AFDNP55196 1824 aaKnown RBP24.33■■□□□ 1.49
PCDHB5-202ENST00000623915 NEFMP07197 916 aa24.33■■□□□ 1.49
PCDHB5-202ENST00000623915 USPL1Q5W0Q7 1092 aa24.33■■□□□ 1.49
PCDHB5-202ENST00000623915 PIM2Q9P1W9 311 aa24.33■■□□□ 1.49
PCDHB5-202ENST00000623915 ZBTB1Q9Y2K1 713 aa24.33■■□□□ 1.49
PCDHB5-202ENST00000623915 COL15A1P39059 1388 aa24.32■■□□□ 1.48
PCDHB5-202ENST00000623915 IL17REQ8NFR9 667 aa24.32■■□□□ 1.48
PCDHB5-202ENST00000623915 CHRNA5P30532 468 aa24.31■■□□□ 1.48
PCDHB5-202ENST00000623915 BCL2L12Q9HB09 334 aa24.3■■□□□ 1.48
PCDHB5-202ENST00000623915 ZPR1O75312 459 aa24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 NFIXQ14938 502 aa24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 NFE2L2Q16236 605 aa24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 DALRD3Q5D0E6 543 aaKnown RBP24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 C9orf131Q5VYM1 1079 aa24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 VSIG10Q8N0Z9 540 aa24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 NMRK2Q9NPI5 230 aa24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 NARFQ9UHQ1 456 aa24.29■■□□□ 1.48
PCDHB5-202ENST00000623915 WDR43Q15061 677 aaKnown RBP eCLIP24.28■■□□□ 1.48
PCDHB5-202ENST00000623915 DLEC1Q9Y238 1755 aa24.28■■□□□ 1.48
PCDHB5-202ENST00000623915 ADAMTS8Q9UP79 889 aa24.27■■□□□ 1.48
PCDHB5-202ENST00000623915 MAPK8IP3Q9UPT6 1336 aa24.27■■□□□ 1.48
PCDHB5-202ENST00000623915 SBF1O95248 1867 aa24.26■■□□□ 1.47
PCDHB5-202ENST00000623915 RUNDC1Q96C34 613 aa24.26■■□□□ 1.47
PCDHB5-202ENST00000623915 TOMM70O94826 608 aa24.25■■□□□ 1.47
PCDHB5-202ENST00000623915 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
PCDHB5-202ENST00000623915 RTF1Q92541 710 aaKnown RBP24.24■■□□□ 1.47
PCDHB5-202ENST00000623915 SCN7AQ01118 1682 aa24.24■■□□□ 1.47
PCDHB5-202ENST00000623915 TEFQ10587 303 aa24.23■■□□□ 1.47
PCDHB5-202ENST00000623915 CARMIL3Q8ND23 1372 aa24.23■■□□□ 1.47
PCDHB5-202ENST00000623915 EIF5P55010 431 aaKnown RBP24.22■■□□□ 1.47
PCDHB5-202ENST00000623915 CCDC184Q52MB2 194 aa24.22■■□□□ 1.47
PCDHB5-202ENST00000623915 NCBP3Q53F19 620 aaKnown RBP24.22■■□□□ 1.47
PCDHB5-202ENST00000623915 ZNF496Q96IT1 587 aaPredicted RBP24.22■■□□□ 1.47
PCDHB5-202ENST00000623915 KDM3BQ7LBC6 1761 aa24.21■■□□□ 1.47
PCDHB5-202ENST00000623915 HEG1Q9ULI3 1381 aa24.21■■□□□ 1.47
PCDHB5-202ENST00000623915 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
PCDHB5-202ENST00000623915 TMPOP42166 694 aaKnown RBP24.21■■□□□ 1.47
PCDHB5-202ENST00000623915 RNF181Q9P0P0 153 aa24.21■■□□□ 1.47
PCDHB5-202ENST00000623915 SERPINB2P05120 415 aa24.2■■□□□ 1.46
PCDHB5-202ENST00000623915 LMOD3Q0VAK6 560 aa24.2■■□□□ 1.46
PCDHB5-202ENST00000623915 TTC5Q8N0Z6 440 aa24.2■■□□□ 1.46
PCDHB5-202ENST00000623915 ZNF790Q6PG37 636 aa24.19■■□□□ 1.46
PCDHB5-202ENST00000623915 ANKRD31Q8N7Z5 1873 aa24.19■■□□□ 1.46
PCDHB5-202ENST00000623915 TNRC6CQ9HCJ0 1690 aaKnown RBP24.18■■□□□ 1.46
PCDHB5-202ENST00000623915 STARD3NLO95772 234 aa24.18■■□□□ 1.46
PCDHB5-202ENST00000623915 APLP1P51693 650 aa24.18■■□□□ 1.46
PCDHB5-202ENST00000623915 BABAM1Q9NWV8 329 aa24.18■■□□□ 1.46
PCDHB5-202ENST00000623915 PRELPP51888 382 aa24.17■■□□□ 1.46
PCDHB5-202ENST00000623915 RASSF7Q02833 373 aa24.17■■□□□ 1.46
PCDHB5-202ENST00000623915 IFFO2Q5TF58 517 aa24.17■■□□□ 1.46
PCDHB5-202ENST00000623915 RBM46Q8TBY0 533 aaKnown RBP24.17■■□□□ 1.46
PCDHB5-202ENST00000623915 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
PCDHB5-202ENST00000623915 WDR90Q96KV7 1748 aa24.16■■□□□ 1.46
PCDHB5-202ENST00000623915 TAF7Q15545 349 aaPredicted RBP24.16■■□□□ 1.46
PCDHB5-202ENST00000623915 MCM10Q7L590 875 aa24.16■■□□□ 1.46
PCDHB5-202ENST00000623915 COL11A2P13942 1736 aaPredicted RBP24.15■■□□□ 1.46
PCDHB5-202ENST00000623915 RIPK4P57078 832 aa24.15■■□□□ 1.46
PCDHB5-202ENST00000623915 DNAJC5GQ8N7S2 189 aa24.15■■□□□ 1.46
PCDHB5-202ENST00000623915 KDM2BQ8NHM5 1336 aa24.14■■□□□ 1.46
PCDHB5-202ENST00000623915 TBC1D9BQ66K14 1250 aa24.14■■□□□ 1.45
PCDHB5-202ENST00000623915 TIAM2Q8IVF5 1701 aa24.13■■□□□ 1.45
PCDHB5-202ENST00000623915 A0A087WZG4 1122 aa24.13■■□□□ 1.45
PCDHB5-202ENST00000623915 BTBD11A6QL63 1104 aa24.13■■□□□ 1.45
PCDHB5-202ENST00000623915 BICDL1Q6ZP65 573 aa24.13■■□□□ 1.45
PCDHB5-202ENST00000623915 C2CD5Q86YS7 1000 aa24.13■■□□□ 1.45
PCDHB5-202ENST00000623915 TEX13AQ9BXU3 409 aaPredicted RBP24.13■■□□□ 1.45
PCDHB5-202ENST00000623915 BCORQ6W2J9 1755 aa24.13■■□□□ 1.45
PCDHB5-202ENST00000623915 ZC3H4Q9UPT8 1303 aaKnown RBP24.12■■□□□ 1.45
PCDHB5-202ENST00000623915 KCNQ3O43525 872 aa24.12■■□□□ 1.45
PCDHB5-202ENST00000623915 DCTN1Q14203 1278 aa24.12■■□□□ 1.45
PCDHB5-202ENST00000623915 TTLL6Q8N841 843 aa24.12■■□□□ 1.45
PCDHB5-202ENST00000623915 TRIM35Q9UPQ4 493 aa24.12■■□□□ 1.45
PCDHB5-202ENST00000623915 IL6STP40189 918 aaPredicted RBP24.11■■□□□ 1.45
PCDHB5-202ENST00000623915 CCDC146Q8IYE0 955 aa24.11■■□□□ 1.45
PCDHB5-202ENST00000623915 FMNL2Q96PY5 1086 aa24.11■■□□□ 1.45
PCDHB5-202ENST00000623915 TBC1D2BQ9UPU7 963 aa24.11■■□□□ 1.45
PCDHB5-202ENST00000623915 CCER2I3L3R5 266 aa24.1■■□□□ 1.45
PCDHB5-202ENST00000623915 NFKBIEO00221 500 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms