RNA–Protein interactions for RNA: ENST00000623527.3

CDHR1-206, Transcript of cadherin related family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR1, Length 6,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-206ENST00000623527 RPAP2Q8IXW5 612 aaPredicted RBP12.61□□□□□ -0.39
CDHR1-206ENST00000623527 PAFAH1B1P43034 410 aa12.6□□□□□ -0.39
CDHR1-206ENST00000623527 IGSF3O75054 1194 aa12.6□□□□□ -0.39
CDHR1-206ENST00000623527 CEP131Q9UPN4 1083 aa12.6□□□□□ -0.39
CDHR1-206ENST00000623527 CTR9Q6PD62 1173 aa12.6□□□□□ -0.39
CDHR1-206ENST00000623527 DUSP27Q5VZP5 1158 aa12.6□□□□□ -0.39
CDHR1-206ENST00000623527 MAATS1Q7Z4T9 603 aa12.6□□□□□ -0.39
CDHR1-206ENST00000623527 WASF1Q92558 559 aa12.6□□□□□ -0.39
CDHR1-206ENST00000623527 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDHR1-206ENST00000623527 V9GYY5 206 aaPredicted RBP12.6□□□□□ -0.39
CDHR1-206ENST00000623527 SCAND2PQ9GZW5 306 aaPredicted RBP12.6□□□□□ -0.39
CDHR1-206ENST00000623527 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
CDHR1-206ENST00000623527 MYO1BO43795 1136 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
CDHR1-206ENST00000623527 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
CDHR1-206ENST00000623527 CALCOCO1Q9P1Z2 691 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 MKNK2Q9HBH9 465 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 TCERG1LQ5VWI1 586 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
CDHR1-206ENST00000623527 CCDC175P0C221 793 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 LARP1Q6PKG0 1096 aaKnown RBP12.59□□□□□ -0.39
CDHR1-206ENST00000623527 CEP63Q96MT8 703 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 NAPBQ9H115 298 aa12.59□□□□□ -0.39
CDHR1-206ENST00000623527 PPP1R12BO60237 982 aaPredicted RBP12.58□□□□□ -0.39
CDHR1-206ENST00000623527 IFIT1P09914 478 aaKnown RBP12.58□□□□□ -0.39
CDHR1-206ENST00000623527 IDEP14735 1019 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 NOP2P46087 812 aaKnown RBP12.58□□□□□ -0.4
CDHR1-206ENST00000623527 HAND2P61296 217 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 SNW1Q13573 536 aaKnown RBP12.58□□□□□ -0.4
CDHR1-206ENST00000623527 SCLT1Q96NL6 688 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 JADE2Q9NQC1 790 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 GLRX3O76003 335 aaKnown RBP12.58□□□□□ -0.4
CDHR1-206ENST00000623527 GJB2P29033 226 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 MTIF2P46199 727 aaKnown RBP12.58□□□□□ -0.4
CDHR1-206ENST00000623527 MYD88Q99836 296 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
CDHR1-206ENST00000623527 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 CETN2P41208 172 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 GNG11P61952 73 aa12.58□□□□□ -0.4
CDHR1-206ENST00000623527 ZNF165P49910 485 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
CDHR1-206ENST00000623527 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
CDHR1-206ENST00000623527 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
CDHR1-206ENST00000623527 MNAT1P51948 309 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 NCOA2Q15596 1464 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 DESP17661 470 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 IGHMBP2P38935 993 aaKnown RBP12.57□□□□□ -0.4
CDHR1-206ENST00000623527 CTNNA2P26232 953 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 VAT1LQ9HCJ6 419 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 SNRKQ9NRH2 765 aa12.57□□□□□ -0.4
CDHR1-206ENST00000623527 USO1O60763 962 aaKnown RBP12.56□□□□□ -0.4
CDHR1-206ENST00000623527 MYCNP04198 464 aaPredicted RBP12.56□□□□□ -0.4
CDHR1-206ENST00000623527 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 HOOK3Q86VS8 718 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 TSG101Q99816 390 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 YEATS4O95619 227 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 PPM1FP49593 454 aaPredicted RBP12.56□□□□□ -0.4
CDHR1-206ENST00000623527 LIMCH1Q9UPQ0 1083 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
CDHR1-206ENST00000623527 CEP135Q66GS9 1140 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 TCEANC2Q96MN5 208 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 MCM6Q14566 821 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
CDHR1-206ENST00000623527 JARID2Q92833 1246 aaPredicted RBP12.56□□□□□ -0.4
CDHR1-206ENST00000623527 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
CDHR1-206ENST00000623527 NLRP5P59047 1200 aa12.55□□□□□ -0.4
CDHR1-206ENST00000623527 TERF1P54274 439 aa12.55□□□□□ -0.4
CDHR1-206ENST00000623527 VPS36Q86VN1 386 aa12.55□□□□□ -0.4
CDHR1-206ENST00000623527 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
CDHR1-206ENST00000623527 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
CDHR1-206ENST00000623527 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
CDHR1-206ENST00000623527 CRACR2BQ8N4Y2 399 aaPredicted RBP12.55□□□□□ -0.4
CDHR1-206ENST00000623527 ZNF213O14771 459 aa12.55□□□□□ -0.4
CDHR1-206ENST00000623527 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDHR1-206ENST00000623527 CTCFLQ8NI51 663 aaPredicted RBP12.55□□□□□ -0.4
CDHR1-206ENST00000623527 GOLGA8AA7E2F4 631 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 WDR78Q5VTH9 848 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 MICU3Q86XE3 530 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 GCOM1H8Y6P7 765 aaPredicted RBP12.54□□□□□ -0.4
CDHR1-206ENST00000623527 STX6O43752 255 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 TBC1D9Q6ZT07 1266 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 LRRC2Q9BYS8 371 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
CDHR1-206ENST00000623527 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 ANKRD30BQ9BXX2 1392 aa12.54□□□□□ -0.4
CDHR1-206ENST00000623527 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
CDHR1-206ENST00000623527 CCDC40Q4G0X9 1142 aa12.53□□□□□ -0.4
CDHR1-206ENST00000623527 CFTRP13569 1480 aa12.53□□□□□ -0.4
CDHR1-206ENST00000623527 CCDC194A0A1B0GVG4 234 aa12.53□□□□□ -0.4
CDHR1-206ENST00000623527 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
CDHR1-206ENST00000623527 ZSCAN23Q3MJ62 389 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms