RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 BTBD11A6QL63 1104 aa21.29■■□□□ 1
DDB2-216ENST00000622878 KCNQ3O43525 872 aa21.29■■□□□ 1
DDB2-216ENST00000622878 STARD3NLO95772 234 aa21.28■■□□□ 1
DDB2-216ENST00000622878 TM4SF1P30408 202 aa21.28■■□□□ 1
DDB2-216ENST00000622878 DDR1Q08345 913 aa21.28■■□□□ 1
DDB2-216ENST00000622878 ZNF784Q8NCA9 323 aaPredicted RBP21.28■■□□□ 1
DDB2-216ENST00000622878 FMNL2Q96PY5 1086 aa21.28■■□□□ 1
DDB2-216ENST00000622878 TEX13AQ9BXU3 409 aaPredicted RBP21.28■■□□□ 1
DDB2-216ENST00000622878 NARFQ9UHQ1 456 aa21.28■■□□□ 1
DDB2-216ENST00000622878 N4BP2Q86UW6 1770 aaPredicted RBP21.28■■□□□ 1
DDB2-216ENST00000622878 EIF5P55010 431 aaKnown RBP21.27■■□□□ 1
DDB2-216ENST00000622878 DCTN1Q14203 1278 aa21.27■■□□□ 1
DDB2-216ENST00000622878 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
DDB2-216ENST00000622878 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
DDB2-216ENST00000622878 PARP3Q9Y6F1 533 aa21.27■■□□□ 1
DDB2-216ENST00000622878 TGFB2P61812 414 aa21.26■□□□□ 0.99
DDB2-216ENST00000622878 ZPR1O75312 459 aa21.25■□□□□ 0.99
DDB2-216ENST00000622878 CANXP27824 592 aaKnown RBP21.25■□□□□ 0.99
DDB2-216ENST00000622878 BRCA1P38398 1863 aaKnown RBP21.25■□□□□ 0.99
DDB2-216ENST00000622878 BCL2L12Q9HB09 334 aa21.25■□□□□ 0.99
DDB2-216ENST00000622878 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
DDB2-216ENST00000622878 NRXN2Q9P2S2 1712 aa21.23■□□□□ 0.99
DDB2-216ENST00000622878 AFDNP55196 1824 aaKnown RBP21.22■□□□□ 0.99
DDB2-216ENST00000622878 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
DDB2-216ENST00000622878 NFE2L2Q16236 605 aa21.22■□□□□ 0.99
DDB2-216ENST00000622878 WWC3Q9ULE0 1092 aa21.22■□□□□ 0.99
DDB2-216ENST00000622878 MYBBP1AQ9BQG0 1328 aaKnown RBP21.22■□□□□ 0.99
DDB2-216ENST00000622878 A1BGP04217 495 aa21.21■□□□□ 0.99
DDB2-216ENST00000622878 KCNA3P22001 575 aa21.21■□□□□ 0.99
DDB2-216ENST00000622878 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
DDB2-216ENST00000622878 TAF7Q15545 349 aaPredicted RBP21.21■□□□□ 0.99
DDB2-216ENST00000622878 KDM3BQ7LBC6 1761 aa21.2■□□□□ 0.99
DDB2-216ENST00000622878 A0A087WZG4 1122 aa21.2■□□□□ 0.98
DDB2-216ENST00000622878 PRAMEF22A3QJZ6 481 aa21.2■□□□□ 0.98
DDB2-216ENST00000622878 NEFMP07197 916 aa21.2■□□□□ 0.98
DDB2-216ENST00000622878 DPEP1P16444 411 aa21.2■□□□□ 0.98
DDB2-216ENST00000622878 NFIXQ14938 502 aa21.2■□□□□ 0.98
DDB2-216ENST00000622878 PNNQ9H307 717 aaKnown RBP21.2■□□□□ 0.98
DDB2-216ENST00000622878 USP16Q9Y5T5 823 aa21.2■□□□□ 0.98
DDB2-216ENST00000622878 SCN7AQ01118 1682 aa21.2■□□□□ 0.98
DDB2-216ENST00000622878 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
DDB2-216ENST00000622878 MIS18AQ9NYP9 233 aa21.17■□□□□ 0.98
DDB2-216ENST00000622878 MAPK8IP3Q9UPT6 1336 aa21.16■□□□□ 0.98
DDB2-216ENST00000622878 TBC1D2BQ9UPU7 963 aa21.16■□□□□ 0.98
DDB2-216ENST00000622878 ARFGEF1Q9Y6D6 1849 aa21.15■□□□□ 0.98
DDB2-216ENST00000622878 BCORQ6W2J9 1755 aa21.15■□□□□ 0.98
DDB2-216ENST00000622878 THUMPD2Q9BTF0 503 aaKnown RBP21.15■□□□□ 0.98
DDB2-216ENST00000622878 PRKRIP1Q9H875 184 aaPredicted RBP21.15■□□□□ 0.98
DDB2-216ENST00000622878 ADCY9O60503 1353 aa21.14■□□□□ 0.98
DDB2-216ENST00000622878 SERPINB2P05120 415 aa21.14■□□□□ 0.97
DDB2-216ENST00000622878 PNISRQ8TF01 805 aaKnown RBP21.14■□□□□ 0.97
DDB2-216ENST00000622878 BCS1LQ9Y276 419 aa21.14■□□□□ 0.97
DDB2-216ENST00000622878 LAMB4A4D0S4 1761 aa21.14■□□□□ 0.97
DDB2-216ENST00000622878 NBPF26B4DH59 902 aa21.13■□□□□ 0.97
DDB2-216ENST00000622878 CAMTA2O94983 1202 aa21.13■□□□□ 0.97
DDB2-216ENST00000622878 PIP4K2AP48426 406 aaPredicted RBP21.13■□□□□ 0.97
DDB2-216ENST00000622878 TBC1D9BQ66K14 1250 aa21.13■□□□□ 0.97
DDB2-216ENST00000622878 NBPF10Q6P3W6 841 aaKnown RBP21.13■□□□□ 0.97
DDB2-216ENST00000622878 NBPF15Q8N660 670 aa21.13■□□□□ 0.97
DDB2-216ENST00000622878 CHRNA5P30532 468 aa21.12■□□□□ 0.97
DDB2-216ENST00000622878 PIM2Q9P1W9 311 aa21.12■□□□□ 0.97
DDB2-216ENST00000622878 ZNF330Q9Y3S2 320 aaPredicted RBP21.12■□□□□ 0.97
DDB2-216ENST00000622878 DLEC1Q9Y238 1755 aa21.12■□□□□ 0.97
DDB2-216ENST00000622878 ZEB1P37275 1124 aaPredicted RBP21.11■□□□□ 0.97
DDB2-216ENST00000622878 TMPOP42166 694 aaKnown RBP21.11■□□□□ 0.97
DDB2-216ENST00000622878 EIF4A1P60842 406 aaKnown RBP21.11■□□□□ 0.97
DDB2-216ENST00000622878 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
DDB2-216ENST00000622878 GIGYF1O75420 1035 aaPredicted RBP21.1■□□□□ 0.97
DDB2-216ENST00000622878 RIPK4P57078 832 aa21.1■□□□□ 0.97
DDB2-216ENST00000622878 BICDL1Q6ZP65 573 aa21.1■□□□□ 0.97
DDB2-216ENST00000622878 DZIP3Q86Y13 1208 aaKnown RBP21.1■□□□□ 0.97
DDB2-216ENST00000622878 ATP10DQ9P241 1426 aa21.1■□□□□ 0.97
DDB2-216ENST00000622878 ANKRD31Q8N7Z5 1873 aa21.09■□□□□ 0.97
DDB2-216ENST00000622878 DALRD3Q5D0E6 543 aaKnown RBP21.08■□□□□ 0.97
DDB2-216ENST00000622878 NPM2Q86SE8 214 aaKnown RBP21.07■□□□□ 0.96
DDB2-216ENST00000622878 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
DDB2-216ENST00000622878 ADAMTS8Q9UP79 889 aa21.07■□□□□ 0.96
DDB2-216ENST00000622878 RGL2O15211 777 aa21.06■□□□□ 0.96
DDB2-216ENST00000622878 PRR5LQ6MZQ0 368 aa21.06■□□□□ 0.96
DDB2-216ENST00000622878 CLEC4GQ6UXB4 293 aa21.06■□□□□ 0.96
DDB2-216ENST00000622878 RUNDC1Q96C34 613 aa21.06■□□□□ 0.96
DDB2-216ENST00000622878 WDR43Q15061 677 aaKnown RBP eCLIP21.05■□□□□ 0.96
DDB2-216ENST00000622878 ARHGAP27Q6ZUM4 889 aa21.05■□□□□ 0.96
DDB2-216ENST00000622878 SETDB2Q96T68 719 aa21.05■□□□□ 0.96
DDB2-216ENST00000622878 BABAM1Q9NWV8 329 aa21.05■□□□□ 0.96
DDB2-216ENST00000622878 LMOD3Q0VAK6 560 aa21.04■□□□□ 0.96
DDB2-216ENST00000622878 TRIM35Q9UPQ4 493 aa21.04■□□□□ 0.96
DDB2-216ENST00000622878 RRP7AQ9Y3A4 280 aaKnown RBP21.04■□□□□ 0.96
DDB2-216ENST00000622878 BRIP1Q9BX63 1249 aa21.03■□□□□ 0.96
DDB2-216ENST00000622878 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
DDB2-216ENST00000622878 COL11A2P13942 1736 aaPredicted RBP21.03■□□□□ 0.96
DDB2-216ENST00000622878 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
DDB2-216ENST00000622878 SBF1O95248 1867 aa21.01■□□□□ 0.95
DDB2-216ENST00000622878 H0YIN7 160 aa21.01■□□□□ 0.95
DDB2-216ENST00000622878 CCDC24Q8N4L8 307 aa21.01■□□□□ 0.95
DDB2-216ENST00000622878 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
DDB2-216ENST00000622878 C1QTNF8P60827 252 aa21■□□□□ 0.95
DDB2-216ENST00000622878 NEUROD2Q15784 382 aa21■□□□□ 0.95
DDB2-216ENST00000622878 CNBD1Q8NA66 436 aa21■□□□□ 0.95
DDB2-216ENST00000622878 PDZRN3Q9UPQ7 1066 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms