RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 EIF4A2Q14240 407 aaKnown RBP18.97■□□□□ 0.63
GABRB3-215ENST00000622697 ANKRD44Q8N8A2 993 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 UBAC1Q9BSL1 405 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 MAGEC2Q9UBF1 373 aaPredicted RBP18.97■□□□□ 0.63
GABRB3-215ENST00000622697 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 ZBTB3Q9H5J0 574 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 KLHL40Q2TBA0 621 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 PPFIBP1Q86W92 1011 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 RHPN1Q8TCX5 695 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 CCDC43Q96MW1 224 aaKnown RBP18.97■□□□□ 0.63
GABRB3-215ENST00000622697 CHPF2Q9P2E5 772 aa18.97■□□□□ 0.63
GABRB3-215ENST00000622697 CDK5RAP3Q96JB5 506 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 CDKL5O76039 1030 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 RAB11FIP4Q86YS3 637 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 SCAND2PQ9GZW5 306 aaPredicted RBP18.96■□□□□ 0.63
GABRB3-215ENST00000622697 SKIDA1Q1XH10 827 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 EVI5LQ96CN4 794 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 SNRKQ9NRH2 765 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 HYPKQ9NX55 129 aa18.96■□□□□ 0.63
GABRB3-215ENST00000622697 CCP110O43303 1012 aa18.95■□□□□ 0.62
GABRB3-215ENST00000622697 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
GABRB3-215ENST00000622697 GOLIM4O00461 696 aa18.95■□□□□ 0.62
GABRB3-215ENST00000622697 PIK3C2GO75747 1445 aa18.95■□□□□ 0.62
GABRB3-215ENST00000622697 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
GABRB3-215ENST00000622697 CFAP100Q494V2 611 aa18.94■□□□□ 0.62
GABRB3-215ENST00000622697 UBE3BQ7Z3V4 1068 aa18.94■□□□□ 0.62
GABRB3-215ENST00000622697 ACBD3Q9H3P7 528 aa18.94■□□□□ 0.62
GABRB3-215ENST00000622697 POGZQ7Z3K3 1410 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 COL17A1Q9UMD9 1497 aaPredicted RBP18.93■□□□□ 0.62
GABRB3-215ENST00000622697 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 ADCY5O95622 1261 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 AK7Q96M32 723 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 MTHFSDQ2M296 383 aaKnown RBP18.93■□□□□ 0.62
GABRB3-215ENST00000622697 GIMAP6Q6P9H5 292 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 A2MP01023 1474 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 MINDY4BA8MYZ0 360 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 HAND2P61296 217 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 ESYT1Q9BSJ8 1104 aa18.93■□□□□ 0.62
GABRB3-215ENST00000622697 C8orf76Q96K31 380 aa18.92■□□□□ 0.62
GABRB3-215ENST00000622697 RRP9O43818 475 aaKnown RBP18.92■□□□□ 0.62
GABRB3-215ENST00000622697 HCLS1P14317 486 aaPredicted RBP18.92■□□□□ 0.62
GABRB3-215ENST00000622697 SETQ01105 290 aaPredicted RBP18.92■□□□□ 0.62
GABRB3-215ENST00000622697 ZNF830Q96NB3 372 aaPredicted RBP18.92■□□□□ 0.62
GABRB3-215ENST00000622697 GPTP24298 496 aa18.92■□□□□ 0.62
GABRB3-215ENST00000622697 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
GABRB3-215ENST00000622697 LRRC2Q9BYS8 371 aa18.92■□□□□ 0.62
GABRB3-215ENST00000622697 CNPY2Q9Y2B0 182 aa18.92■□□□□ 0.62
GABRB3-215ENST00000622697 STARD3NLO95772 234 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 ZGPATQ8N5A5 531 aaKnown RBP18.91■□□□□ 0.62
GABRB3-215ENST00000622697 DACH1Q9UI36 760 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 CLIP2Q9UDT6 1046 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 DNMT1P26358 1616 aaKnown RBP18.91■□□□□ 0.62
GABRB3-215ENST00000622697 ZHX3Q9H4I2 956 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 ADAMTS12P58397 1594 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
GABRB3-215ENST00000622697 BIN1O00499 593 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 CBFA2T2O43439 604 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 TRMT1Q9NXH9 659 aaKnown RBP18.9■□□□□ 0.62
GABRB3-215ENST00000622697 AKAP2Q9Y2D5 859 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 SMC5Q8IY18 1101 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 CCDC144CPQ8IYA2 1237 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 KRT18P05783 430 aaKnown RBP18.9■□□□□ 0.62
GABRB3-215ENST00000622697 DDX46Q7L014 1031 aaKnown RBP18.9■□□□□ 0.62
GABRB3-215ENST00000622697 PA2G4Q9UQ80 394 aaKnown RBP18.9■□□□□ 0.62
GABRB3-215ENST00000622697 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
GABRB3-215ENST00000622697 SLC39A6Q13433 755 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 PRDM10Q9NQV6 1147 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
GABRB3-215ENST00000622697 KDM2BQ8NHM5 1336 aa18.9■□□□□ 0.62
GABRB3-215ENST00000622697 PDCL2Q8N4E4 241 aa18.89■□□□□ 0.62
GABRB3-215ENST00000622697 IGHMBP2P38935 993 aaKnown RBP18.89■□□□□ 0.61
GABRB3-215ENST00000622697 CHRNA2Q15822 529 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 PLEKHM2Q8IWE5 1019 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 ANKRD24Q8TF21 1146 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 KLHL10Q6JEL2 608 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 SNX21Q969T3 373 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 C16orf45Q96MC5 204 aaPredicted RBP18.89■□□□□ 0.61
GABRB3-215ENST00000622697 GOLGA8BA8MQT2 603 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 SMTNL1A8MU46 457 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 ISM2Q6H9L7 571 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 EIF2AK4Q9P2K8 1649 aaKnown RBP18.89■□□□□ 0.61
GABRB3-215ENST00000622697 ZNF213O14771 459 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 FSIP1Q8NA03 581 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 DCTPP1Q9H773 170 aa18.89■□□□□ 0.61
GABRB3-215ENST00000622697 USP48Q86UV5 1035 aa18.88■□□□□ 0.61
GABRB3-215ENST00000622697 POLR3DP05423 398 aaPredicted RBP18.88■□□□□ 0.61
GABRB3-215ENST00000622697 PDIA4P13667 645 aaKnown RBP18.88■□□□□ 0.61
GABRB3-215ENST00000622697 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
GABRB3-215ENST00000622697 ANO10Q9NW15 660 aa18.88■□□□□ 0.61
GABRB3-215ENST00000622697 ATP8B2P98198 1209 aa18.88■□□□□ 0.61
GABRB3-215ENST00000622697 CCAR1Q8IX12 1150 aaKnown RBP18.88■□□□□ 0.61
GABRB3-215ENST00000622697 NAPBQ9H115 298 aa18.88■□□□□ 0.61
GABRB3-215ENST00000622697 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
GABRB3-215ENST00000622697 ZNHIT6Q9NWK9 470 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms