RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 USPL1Q5W0Q7 1092 aa25.76■■□□□ 1.71
LTBP4-239ENST00000622565 PARP3Q9Y6F1 533 aa25.76■■□□□ 1.71
LTBP4-239ENST00000622565 COL15A1P39059 1388 aa25.75■■□□□ 1.71
LTBP4-239ENST00000622565 CANXP27824 592 aaKnown RBP25.74■■□□□ 1.71
LTBP4-239ENST00000622565 BTBD11A6QL63 1104 aa25.73■■□□□ 1.71
LTBP4-239ENST00000622565 TM4SF1P30408 202 aa25.73■■□□□ 1.71
LTBP4-239ENST00000622565 PLEKHF1Q96S99 279 aa25.73■■□□□ 1.71
LTBP4-239ENST00000622565 BCL2L12Q9HB09 334 aa25.73■■□□□ 1.71
LTBP4-239ENST00000622565 N4BP2Q86UW6 1770 aaPredicted RBP25.72■■□□□ 1.71
LTBP4-239ENST00000622565 A0A0G2JLW4 131 aa25.72■■□□□ 1.71
LTBP4-239ENST00000622565 NARFQ9UHQ1 456 aa25.72■■□□□ 1.71
LTBP4-239ENST00000622565 TGFB2P61812 414 aa25.71■■□□□ 1.71
LTBP4-239ENST00000622565 RTF1Q92541 710 aaKnown RBP25.71■■□□□ 1.71
LTBP4-239ENST00000622565 FMNL2Q96PY5 1086 aa25.71■■□□□ 1.71
LTBP4-239ENST00000622565 POLRMTO00411 1230 aaKnown RBP25.7■■□□□ 1.7
LTBP4-239ENST00000622565 ZPR1O75312 459 aa25.7■■□□□ 1.7
LTBP4-239ENST00000622565 STARD3NLO95772 234 aa25.7■■□□□ 1.7
LTBP4-239ENST00000622565 EIF5P55010 431 aaKnown RBP25.7■■□□□ 1.7
LTBP4-239ENST00000622565 PRAMEF22A3QJZ6 481 aa25.69■■□□□ 1.7
LTBP4-239ENST00000622565 DPEP1P16444 411 aa25.69■■□□□ 1.7
LTBP4-239ENST00000622565 HTATSF1O43719 755 aaKnown RBP25.68■■□□□ 1.7
LTBP4-239ENST00000622565 A1BGP04217 495 aa25.68■■□□□ 1.7
LTBP4-239ENST00000622565 KCNA3P22001 575 aa25.68■■□□□ 1.7
LTBP4-239ENST00000622565 RALBP1Q15311 655 aa25.68■■□□□ 1.7
LTBP4-239ENST00000622565 NFIXQ14938 502 aa25.67■■□□□ 1.7
LTBP4-239ENST00000622565 TEX13AQ9BXU3 409 aaPredicted RBP25.67■■□□□ 1.7
LTBP4-239ENST00000622565 USP16Q9Y5T5 823 aa25.66■■□□□ 1.7
LTBP4-239ENST00000622565 MIS18AQ9NYP9 233 aa25.64■■□□□ 1.7
LTBP4-239ENST00000622565 PIP4K2AP48426 406 aaPredicted RBP25.63■■□□□ 1.69
LTBP4-239ENST00000622565 BCS1LQ9Y276 419 aa25.63■■□□□ 1.69
LTBP4-239ENST00000622565 DLG5Q8TDM6 1919 aa25.63■■□□□ 1.69
LTBP4-239ENST00000622565 IL6STP40189 918 aaPredicted RBP25.62■■□□□ 1.69
LTBP4-239ENST00000622565 TAF7Q15545 349 aaPredicted RBP25.62■■□□□ 1.69
LTBP4-239ENST00000622565 NFE2L2Q16236 605 aa25.62■■□□□ 1.69
LTBP4-239ENST00000622565 THUMPD2Q9BTF0 503 aaKnown RBP25.62■■□□□ 1.69
LTBP4-239ENST00000622565 TBC1D2BQ9UPU7 963 aa25.62■■□□□ 1.69
LTBP4-239ENST00000622565 ZNF330Q9Y3S2 320 aaPredicted RBP25.62■■□□□ 1.69
LTBP4-239ENST00000622565 NRXN2Q9P2S2 1712 aa25.62■■□□□ 1.69
LTBP4-239ENST00000622565 CHRNA5P30532 468 aa25.61■■□□□ 1.69
LTBP4-239ENST00000622565 BRCA1P38398 1863 aaKnown RBP25.61■■□□□ 1.69
LTBP4-239ENST00000622565 SCN7AQ01118 1682 aa25.61■■□□□ 1.69
LTBP4-239ENST00000622565 ADCY9O60503 1353 aa25.6■■□□□ 1.69
LTBP4-239ENST00000622565 A0A087WZG4 1122 aa25.6■■□□□ 1.69
LTBP4-239ENST00000622565 AFDNP55196 1824 aaKnown RBP25.6■■□□□ 1.69
LTBP4-239ENST00000622565 MYBBP1AQ9BQG0 1328 aaKnown RBP25.6■■□□□ 1.69
LTBP4-239ENST00000622565 SERPINB2P05120 415 aa25.59■■□□□ 1.69
LTBP4-239ENST00000622565 SNRPA1P09661 255 aaKnown RBP25.59■■□□□ 1.69
LTBP4-239ENST00000622565 TBC1D9BQ66K14 1250 aa25.59■■□□□ 1.69
LTBP4-239ENST00000622565 BICDL1Q6ZP65 573 aa25.59■■□□□ 1.69
LTBP4-239ENST00000622565 ATP10DQ9P241 1426 aa25.59■■□□□ 1.69
LTBP4-239ENST00000622565 NEFMP07197 916 aa25.58■■□□□ 1.69
LTBP4-239ENST00000622565 CARMIL3Q8ND23 1372 aa25.57■■□□□ 1.68
LTBP4-239ENST00000622565 CAMTA2O94983 1202 aa25.57■■□□□ 1.68
LTBP4-239ENST00000622565 MAPK8IP3Q9UPT6 1336 aa25.57■■□□□ 1.68
LTBP4-239ENST00000622565 KDM3BQ7LBC6 1761 aa25.56■■□□□ 1.68
LTBP4-239ENST00000622565 NBPF26B4DH59 902 aa25.56■■□□□ 1.68
LTBP4-239ENST00000622565 NBPF10Q6P3W6 841 aaKnown RBP25.56■■□□□ 1.68
LTBP4-239ENST00000622565 NBPF15Q8N660 670 aa25.56■■□□□ 1.68
LTBP4-239ENST00000622565 PIM2Q9P1W9 311 aa25.55■■□□□ 1.68
LTBP4-239ENST00000622565 PNNQ9H307 717 aaKnown RBP25.54■■□□□ 1.68
LTBP4-239ENST00000622565 DZIP3Q86Y13 1208 aaKnown RBP25.53■■□□□ 1.68
LTBP4-239ENST00000622565 BCORQ6W2J9 1755 aa25.52■■□□□ 1.68
LTBP4-239ENST00000622565 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
LTBP4-239ENST00000622565 EIF4A1P60842 406 aaKnown RBP25.51■■□□□ 1.67
LTBP4-239ENST00000622565 DALRD3Q5D0E6 543 aaKnown RBP25.51■■□□□ 1.67
LTBP4-239ENST00000622565 CCDC24Q8N4L8 307 aa25.51■■□□□ 1.67
LTBP4-239ENST00000622565 PRKRIP1Q9H875 184 aaPredicted RBP25.51■■□□□ 1.67
LTBP4-239ENST00000622565 RIPK4P57078 832 aa25.5■■□□□ 1.67
LTBP4-239ENST00000622565 CCDC146Q8IYE0 955 aa25.5■■□□□ 1.67
LTBP4-239ENST00000622565 PNISRQ8TF01 805 aaKnown RBP25.5■■□□□ 1.67
LTBP4-239ENST00000622565 ARFGEF1Q9Y6D6 1849 aa25.49■■□□□ 1.67
LTBP4-239ENST00000622565 LAMB4A4D0S4 1761 aa25.49■■□□□ 1.67
LTBP4-239ENST00000622565 GIGYF1O75420 1035 aaPredicted RBP25.49■■□□□ 1.67
LTBP4-239ENST00000622565 TMPOP42166 694 aaKnown RBP25.49■■□□□ 1.67
LTBP4-239ENST00000622565 ZNF526Q8TF50 670 aaPredicted RBP25.49■■□□□ 1.67
LTBP4-239ENST00000622565 C1QTNF8P60827 252 aa25.48■■□□□ 1.67
LTBP4-239ENST00000622565 PRR5LQ6MZQ0 368 aa25.48■■□□□ 1.67
LTBP4-239ENST00000622565 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
LTBP4-239ENST00000622565 NPM2Q86SE8 214 aaKnown RBP25.47■■□□□ 1.67
LTBP4-239ENST00000622565 ANKRD31Q8N7Z5 1873 aa25.47■■□□□ 1.67
LTBP4-239ENST00000622565 DLEC1Q9Y238 1755 aa25.46■■□□□ 1.67
LTBP4-239ENST00000622565 C2CD5Q86YS7 1000 aa25.46■■□□□ 1.67
LTBP4-239ENST00000622565 SETDB2Q96T68 719 aa25.45■■□□□ 1.66
LTBP4-239ENST00000622565 ADAMTS8Q9UP79 889 aa25.45■■□□□ 1.66
LTBP4-239ENST00000622565 GPBP1L1Q9HC44 474 aaPredicted RBP25.44■■□□□ 1.66
LTBP4-239ENST00000622565 NEUROD2Q15784 382 aa25.43■■□□□ 1.66
LTBP4-239ENST00000622565 HLFQ16534 295 aa25.42■■□□□ 1.66
LTBP4-239ENST00000622565 CLEC4GQ6UXB4 293 aa25.42■■□□□ 1.66
LTBP4-239ENST00000622565 BRIP1Q9BX63 1249 aa25.42■■□□□ 1.66
LTBP4-239ENST00000622565 TSPYL4Q9UJ04 414 aa25.42■■□□□ 1.66
LTBP4-239ENST00000622565 COL11A2P13942 1736 aaPredicted RBP25.42■■□□□ 1.66
LTBP4-239ENST00000622565 H0YIN7 160 aa25.41■■□□□ 1.66
LTBP4-239ENST00000622565 WDR43Q15061 677 aaKnown RBP eCLIP25.41■■□□□ 1.66
LTBP4-239ENST00000622565 C9orf131Q5VYM1 1079 aa25.41■■□□□ 1.66
LTBP4-239ENST00000622565 RUNDC1Q96C34 613 aa25.41■■□□□ 1.66
LTBP4-239ENST00000622565 TRIM35Q9UPQ4 493 aa25.41■■□□□ 1.66
LTBP4-239ENST00000622565 NGEFQ8N5V2 710 aa25.4■■□□□ 1.66
LTBP4-239ENST00000622565 TTLL6Q8N841 843 aa25.4■■□□□ 1.66
LTBP4-239ENST00000622565 CNBD1Q8NA66 436 aa25.4■■□□□ 1.66
LTBP4-239ENST00000622565 PRELPP51888 382 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms