RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 SBNO1A3KN83 1393 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 ORAI2Q96SN7 254 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 VPS37DQ86XT2 251 aa15.81■□□□□ 0.12
SIRPA-204ENST00000622179 ZGPATQ8N5A5 531 aaKnown RBP15.81■□□□□ 0.12
SIRPA-204ENST00000622179 CCDC73Q6ZRK6 1079 aa15.81■□□□□ 0.12
SIRPA-204ENST00000622179 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
SIRPA-204ENST00000622179 IP6K1Q92551 441 aa15.81■□□□□ 0.12
SIRPA-204ENST00000622179 DDX11Q96FC9 970 aa15.81■□□□□ 0.12
SIRPA-204ENST00000622179 ZBTB3Q9H5J0 574 aa15.81■□□□□ 0.12
SIRPA-204ENST00000622179 ABCC4O15439 1325 aa15.81■□□□□ 0.12
SIRPA-204ENST00000622179 PNMA6EA0A0J9YXQ4 647 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 COPS6Q7L5N1 327 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 CREBRFQ8IUR6 639 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 R3HCC1Q9Y3T6 440 aaKnown RBP15.8■□□□□ 0.12
SIRPA-204ENST00000622179 ABCA6Q8N139 1617 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 XRCC6P12956 609 aaKnown RBP eCLIP15.8■□□□□ 0.12
SIRPA-204ENST00000622179 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
SIRPA-204ENST00000622179 ANKRD1Q15327 319 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 TRIM29Q14134 588 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 LIMCH1Q9UPQ0 1083 aa15.8■□□□□ 0.12
SIRPA-204ENST00000622179 NFATC2IPQ8NCF5 419 aa15.79■□□□□ 0.12
SIRPA-204ENST00000622179 ROBO2Q9HCK4 1378 aa15.79■□□□□ 0.12
SIRPA-204ENST00000622179 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
SIRPA-204ENST00000622179 USP19O94966 1318 aa15.79■□□□□ 0.12
SIRPA-204ENST00000622179 TSPOAP1O95153 1857 aa15.79■□□□□ 0.12
SIRPA-204ENST00000622179 KRT85P78386 507 aa15.79■□□□□ 0.12
SIRPA-204ENST00000622179 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
SIRPA-204ENST00000622179 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
SIRPA-204ENST00000622179 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
SIRPA-204ENST00000622179 KSR2Q6VAB6 950 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 ANKRD13DQ6ZTN6 518 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 SDF4Q9BRK5 362 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
SIRPA-204ENST00000622179 FAM13BQ9NYF5 915 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 STK11IPQ8N1F8 1099 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 TCEANC2Q96MN5 208 aa15.78■□□□□ 0.12
SIRPA-204ENST00000622179 EVI5LQ96CN4 794 aa15.77■□□□□ 0.12
SIRPA-204ENST00000622179 GRM8O00222 908 aa15.77■□□□□ 0.12
SIRPA-204ENST00000622179 GSPT1P15170 499 aaKnown RBP15.77■□□□□ 0.12
SIRPA-204ENST00000622179 RAB3GAP1Q15042 981 aa15.77■□□□□ 0.12
SIRPA-204ENST00000622179 IL17REQ8NFR9 667 aa15.77■□□□□ 0.12
SIRPA-204ENST00000622179 RASSF8Q8NHQ8 419 aa15.77■□□□□ 0.12
SIRPA-204ENST00000622179 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.77■□□□□ 0.11
SIRPA-204ENST00000622179 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
SIRPA-204ENST00000622179 CHMLP26374 656 aa15.76■□□□□ 0.11
SIRPA-204ENST00000622179 SPC24Q8NBT2 197 aa15.76■□□□□ 0.11
SIRPA-204ENST00000622179 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
SIRPA-204ENST00000622179 KLHL40Q2TBA0 621 aa15.76■□□□□ 0.11
SIRPA-204ENST00000622179 ZNF592Q92610 1267 aa15.76■□□□□ 0.11
SIRPA-204ENST00000622179 TBC1D2BQ9UPU7 963 aa15.76■□□□□ 0.11
SIRPA-204ENST00000622179 SOS1Q07889 1333 aaPredicted RBP15.76■□□□□ 0.11
SIRPA-204ENST00000622179 NBPF7P0C2Y1 421 aaPredicted RBP15.76■□□□□ 0.11
SIRPA-204ENST00000622179 FAM135BQ49AJ0 1406 aa15.76■□□□□ 0.11
SIRPA-204ENST00000622179 ABCA9Q8IUA7 1624 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 CEP152O94986 1710 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 ARHGAP31Q2M1Z3 1444 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 LETM1O95202 739 aaPredicted RBP15.75■□□□□ 0.11
SIRPA-204ENST00000622179 RRP12Q5JTH9 1297 aaKnown RBP15.75■□□□□ 0.11
SIRPA-204ENST00000622179 GLI2P10070 1586 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 CCDC34Q96HJ3 373 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 RNMTO43148 476 aaKnown RBP15.75■□□□□ 0.11
SIRPA-204ENST00000622179 SPATA32Q96LK8 384 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 AATKQ6ZMQ8 1374 aa15.75■□□□□ 0.11
SIRPA-204ENST00000622179 KCNQ3O43525 872 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 PPFIA3O75145 1194 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 KRT32Q14532 448 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 ADGRB3O60242 1522 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 SIRT2Q8IXJ6 389 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 NECAB1Q8N987 351 aa15.74■□□□□ 0.11
SIRPA-204ENST00000622179 BCL11BQ9C0K0 894 aaPredicted RBP15.74■□□□□ 0.11
SIRPA-204ENST00000622179 ALDH1L1O75891 902 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 IFIT1P09914 478 aaKnown RBP15.73■□□□□ 0.11
SIRPA-204ENST00000622179 ATP2B1P20020 1258 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 CAMK4Q16566 473 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 ATP7BP35670 1465 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 ERICH2A1L162 156 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 TNMDQ9H2S6 317 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 RTL1A6NKG5 1358 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 SNRKQ9NRH2 765 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 PPRC1Q5VV67 1664 aaKnown RBP15.73■□□□□ 0.11
SIRPA-204ENST00000622179 KINO60870 393 aaKnown RBP15.73■□□□□ 0.11
SIRPA-204ENST00000622179 GJB2P29033 226 aa15.73■□□□□ 0.11
SIRPA-204ENST00000622179 DDX46Q7L014 1031 aaKnown RBP15.73■□□□□ 0.11
SIRPA-204ENST00000622179 KIAA0232Q92628 1395 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 NUTM2BA6NNL0 878 aaPredicted RBP15.72■□□□□ 0.11
SIRPA-204ENST00000622179 NUTM2EB1AL46 878 aaPredicted RBP15.72■□□□□ 0.11
SIRPA-204ENST00000622179 GOLIM4O00461 696 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 STX6O43752 255 aa15.72■□□□□ 0.11
SIRPA-204ENST00000622179 IDH1O75874 414 aaKnown RBP15.72■□□□□ 0.11
SIRPA-204ENST00000622179 CCDC192P0DO97 292 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms