RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 V9GYY5 206 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA11-203ENST00000622044 NLRP6P59044 892 aa13.58□□□□□ -0.23
PCDHGA11-203ENST00000622044 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.23
PCDHGA11-203ENST00000622044 DDX11Q96FC9 970 aa13.58□□□□□ -0.23
PCDHGA11-203ENST00000622044 KDM4AO75164 1064 aa13.58□□□□□ -0.24
PCDHGA11-203ENST00000622044 F13A1P00488 732 aa13.58□□□□□ -0.24
PCDHGA11-203ENST00000622044 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
PCDHGA11-203ENST00000622044 MTHFSDQ2M296 383 aaKnown RBP13.58□□□□□ -0.24
PCDHGA11-203ENST00000622044 QRICH2Q9H0J4 1663 aa13.58□□□□□ -0.24
PCDHGA11-203ENST00000622044 ZNF853P0CG23 659 aa13.58□□□□□ -0.24
PCDHGA11-203ENST00000622044 FMNL2Q96PY5 1086 aa13.58□□□□□ -0.24
PCDHGA11-203ENST00000622044 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 SPATA32Q96LK8 384 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 FSD1Q9BTV5 496 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 CHL1O00533 1208 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 RAB11FIP3O75154 756 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 BRPF1P55201 1214 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 TAF7Q15545 349 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
PCDHGA11-203ENST00000622044 TEFQ10587 303 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 TRMT1Q9NXH9 659 aaKnown RBP13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 TULP4Q9NRJ4 1543 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 TNNT1P13805 278 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 ANAPC15P60006 121 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 RHPN1Q8TCX5 695 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 AACSQ86V21 672 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 PHAXQ9H814 394 aaKnown RBP13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 PYCARDQ9ULZ3 195 aa13.56□□□□□ -0.24
PCDHGA11-203ENST00000622044 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 UVSSAQ2YD98 709 aa13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 SMAP1Q8IYB5 467 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 CFAP74Q9C0B2 1584 aa13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 ERICH4A6NGS2 130 aa13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 GORABQ5T7V8 394 aa13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
PCDHGA11-203ENST00000622044 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
PCDHGA11-203ENST00000622044 KIF1BPQ96EK5 621 aa13.54□□□□□ -0.24
PCDHGA11-203ENST00000622044 CGNQ9P2M7 1197 aaKnown RBP13.54□□□□□ -0.24
PCDHGA11-203ENST00000622044 SNX14Q9Y5W7 946 aa13.54□□□□□ -0.24
PCDHGA11-203ENST00000622044 LRMPQ12912 555 aa13.54□□□□□ -0.24
PCDHGA11-203ENST00000622044 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
PCDHGA11-203ENST00000622044 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA11-203ENST00000622044 BOLA2Q9H3K6 86 aa13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 EFCAB6Q5THR3 1501 aa13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 G3BP1Q13283 466 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 ABCA9Q8IUA7 1624 aa13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 HTATSF1O43719 755 aaKnown RBP13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 SF3A1Q15459 793 aaKnown RBP13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
PCDHGA11-203ENST00000622044 ACEP12821 1306 aa13.52□□□□□ -0.24
PCDHGA11-203ENST00000622044 PI4KAP2A4QPH2 592 aa13.52□□□□□ -0.24
PCDHGA11-203ENST00000622044 TPM3P06753 285 aa13.52□□□□□ -0.24
PCDHGA11-203ENST00000622044 PI4KAP1Q8N8J0 262 aa13.52□□□□□ -0.24
PCDHGA11-203ENST00000622044 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.24
PCDHGA11-203ENST00000622044 IL25Q9H293 177 aa13.52□□□□□ -0.24
PCDHGA11-203ENST00000622044 ZNF165P49910 485 aa13.52□□□□□ -0.25
PCDHGA11-203ENST00000622044 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
PCDHGA11-203ENST00000622044 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
PCDHGA11-203ENST00000622044 LARGE1O95461 756 aa13.52□□□□□ -0.25
PCDHGA11-203ENST00000622044 CUL4AQ13619 759 aa13.52□□□□□ -0.25
PCDHGA11-203ENST00000622044 TYRO3Q06418 890 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 HOMER1Q86YM7 354 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 GLI2P10070 1586 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 NRDCO43847 1150 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 GLRX3O76003 335 aaKnown RBP13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 PDCP20941 246 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 HSPA4P34932 840 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
PCDHGA11-203ENST00000622044 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 NBPF7P0C2Y1 421 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 CCDC73Q6ZRK6 1079 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 MAP3K19Q56UN5 1328 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 MED14O60244 1454 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 PIK3R4Q99570 1358 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 ATP2B3Q16720 1220 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
PCDHGA11-203ENST00000622044 SGSM2O43147 1006 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 LIG1P18858 919 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 PSMA5P28066 241 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms