RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 NEUROD6Q96NK8 337 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 VPS72Q15906 364 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 KSR2Q6VAB6 950 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 UBE3BQ7Z3V4 1068 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 USP32Q8NFA0 1604 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 SPATA31A1Q5TZJ5 1347 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 G3V3G9 751 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 GNPATO15228 680 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 DCAF8Q5TAQ9 597 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 DZIP3Q86Y13 1208 aaKnown RBP15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 ARHGAP45Q92619 1136 aa15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 LRRFIP2Q9Y608 721 aaKnown RBP15.47■□□□□ 0.07
SCAMP1-207ENST00000621999 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
SCAMP1-207ENST00000621999 IFIT2P09913 472 aaKnown RBP15.46■□□□□ 0.07
SCAMP1-207ENST00000621999 CWF19L2Q2TBE0 894 aaKnown RBP15.46■□□□□ 0.07
SCAMP1-207ENST00000621999 TFCP2L1Q9NZI6 479 aa15.46■□□□□ 0.07
SCAMP1-207ENST00000621999 KCNJ4P48050 445 aa15.46■□□□□ 0.07
SCAMP1-207ENST00000621999 MEIS3Q99687 375 aa15.46■□□□□ 0.07
SCAMP1-207ENST00000621999 RTCBQ9Y3I0 505 aaKnown RBP15.46■□□□□ 0.06
SCAMP1-207ENST00000621999 ZNF853P0CG23 659 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 RILPL2Q969X0 211 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 HSP90AB4PQ58FF6 505 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 KDRP35968 1356 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 KCNQ2O43526 872 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 HOXB7P09629 217 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 RBM6P78332 1123 aaKnown RBP15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 CCDC57Q2TAC2 916 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 HSP90AB3PQ58FF7 597 aa15.45■□□□□ 0.06
SCAMP1-207ENST00000621999 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 EXOC6BQ9Y2D4 811 aa15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 LOC102724428A0A0B4J2F2 783 aa15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 SIK1P57059 783 aa15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 SETD1AO15047 1707 aaKnown RBP15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 TRMT2AQ8IZ69 625 aaKnown RBP15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 SPATA31A5Q5VU36 1347 aa15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 SPATA31A7Q8IWB4 1347 aa15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
SCAMP1-207ENST00000621999 HMGB2P26583 209 aaKnown RBP15.43■□□□□ 0.06
SCAMP1-207ENST00000621999 CNNM1Q9NRU3 951 aa15.43■□□□□ 0.06
SCAMP1-207ENST00000621999 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
SCAMP1-207ENST00000621999 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
SCAMP1-207ENST00000621999 CLASRPQ8N2M8 674 aaKnown RBP15.42■□□□□ 0.06
SCAMP1-207ENST00000621999 NWD1Q149M9 1564 aa15.42■□□□□ 0.06
SCAMP1-207ENST00000621999 CCDC87Q9NVE4 849 aa15.42■□□□□ 0.06
SCAMP1-207ENST00000621999 NIP7Q9Y221 180 aaKnown RBP eCLIP15.42■□□□□ 0.06
SCAMP1-207ENST00000621999 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
SCAMP1-207ENST00000621999 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
SCAMP1-207ENST00000621999 MARCH10Q8NA82 808 aaPredicted RBP15.41■□□□□ 0.06
SCAMP1-207ENST00000621999 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
SCAMP1-207ENST00000621999 MPHOSPH8Q99549 860 aa15.41■□□□□ 0.06
SCAMP1-207ENST00000621999 VPS37DQ86XT2 251 aa15.41■□□□□ 0.06
SCAMP1-207ENST00000621999 LINS1Q8NG48 757 aa15.41■□□□□ 0.06
SCAMP1-207ENST00000621999 PXDNQ92626 1479 aa15.4■□□□□ 0.06
SCAMP1-207ENST00000621999 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
SCAMP1-207ENST00000621999 SKAP1Q86WV1 359 aa15.39■□□□□ 0.05
SCAMP1-207ENST00000621999 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
SCAMP1-207ENST00000621999 ATG3Q9NT62 314 aa15.39■□□□□ 0.05
SCAMP1-207ENST00000621999 GRM8O00222 908 aa15.38■□□□□ 0.05
SCAMP1-207ENST00000621999 TTLL7Q6ZT98 887 aa15.38■□□□□ 0.05
SCAMP1-207ENST00000621999 NBPF5PQ86XG9 351 aaPredicted RBP15.38■□□□□ 0.05
SCAMP1-207ENST00000621999 SETDB2Q96T68 719 aa15.38■□□□□ 0.05
SCAMP1-207ENST00000621999 PCDHB15Q9Y5E8 787 aa15.38■□□□□ 0.05
SCAMP1-207ENST00000621999 KIAA1211Q6ZU35 1233 aa15.38■□□□□ 0.05
SCAMP1-207ENST00000621999 ZBTB1Q9Y2K1 713 aa15.38■□□□□ 0.05
SCAMP1-207ENST00000621999 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 COL5A2P05997 1499 aaPredicted RBP15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 PLBD2Q8NHP8 589 aa15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 LRRCC1Q9C099 1032 aa15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 FBXO41Q8TF61 875 aa15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
SCAMP1-207ENST00000621999 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 MEGF6O75095 1541 aa15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 STRCQ7RTU9 1775 aa15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 SMARCA5O60264 1052 aaPredicted RBP15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 CRKLP46109 303 aaKnown RBP15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 MON2Q7Z3U7 1717 aa15.36■□□□□ 0.05
SCAMP1-207ENST00000621999 CEP126Q9P2H0 1117 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 BAG6P46379 1132 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 PALLDQ8WX93 1383 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 HEG1Q9ULI3 1381 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 LMBR1LQ6UX01 489 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 METTL22Q9BUU2 404 aaPredicted RBP15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 NCAPD2Q15021 1401 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 IGHDP01880 384 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 FBXW7Q969H0 707 aa15.35■□□□□ 0.05
SCAMP1-207ENST00000621999 FAM161AQ3B820 660 aa15.34■□□□□ 0.05
SCAMP1-207ENST00000621999 ERC1Q8IUD2 1116 aa15.34■□□□□ 0.05
SCAMP1-207ENST00000621999 IGHMBP2P38935 993 aaKnown RBP15.34■□□□□ 0.05
SCAMP1-207ENST00000621999 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
SCAMP1-207ENST00000621999 OVOS2A0A0G2JMS6 1433 aa15.34■□□□□ 0.05
SCAMP1-207ENST00000621999 CAMTA1Q9Y6Y1 1673 aa15.34■□□□□ 0.05
SCAMP1-207ENST00000621999 CHD1LQ86WJ1 897 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms