RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 KIAA1210Q9ULL0 1709 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 AOC2O75106 756 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 NFIXQ14938 502 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 NOM1Q5C9Z4 860 aaKnown RBP3.41□□□□□ -1.86
CPNE3-211ENST00000621526 INTS3Q68E01 1043 aaKnown RBP3.41□□□□□ -1.86
CPNE3-211ENST00000621526 CIAPIN1Q6FI81 312 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 HDGFL2Q7Z4V5 671 aaPredicted RBP3.41□□□□□ -1.86
CPNE3-211ENST00000621526 IFNL2Q8IZJ0 200 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 ZC3H15Q8WU90 426 aaKnown RBP3.41□□□□□ -1.86
CPNE3-211ENST00000621526 CCDC102AQ96A19 550 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 TERF2IPQ9NYB0 399 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 NARFQ9UHQ1 456 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 HPS5Q9UPZ3 1129 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 BTAF1O14981 1849 aa3.41□□□□□ -1.86
CPNE3-211ENST00000621526 SLC24A1O60721 1099 aa3.4□□□□□ -1.87
CPNE3-211ENST00000621526 HSP90AB1P08238 724 aaKnown RBP3.4□□□□□ -1.87
CPNE3-211ENST00000621526 GRIPAP1Q4V328 841 aa3.4□□□□□ -1.87
CPNE3-211ENST00000621526 STYK1Q6J9G0 422 aa3.4□□□□□ -1.87
CPNE3-211ENST00000621526 INTS5Q6P9B9 1019 aaKnown RBP3.4□□□□□ -1.87
CPNE3-211ENST00000621526 PAXIP1Q6ZW49 1069 aaPredicted RBP3.4□□□□□ -1.87
CPNE3-211ENST00000621526 RTKN2Q8IZC4 609 aa3.4□□□□□ -1.87
CPNE3-211ENST00000621526 ZNF622Q969S3 477 aaKnown RBP eCLIP3.4□□□□□ -1.87
CPNE3-211ENST00000621526 COG3Q96JB2 828 aa3.4□□□□□ -1.87
CPNE3-211ENST00000621526 RBM42Q9BTD8 480 aaKnown RBP3.4□□□□□ -1.87
CPNE3-211ENST00000621526 RNF186Q9NXI6 227 aa3.4□□□□□ -1.87
CPNE3-211ENST00000621526 SRP68Q9UHB9 627 aaKnown RBP3.4□□□□□ -1.87
CPNE3-211ENST00000621526 COLQQ9Y215 455 aaPredicted RBP3.4□□□□□ -1.87
CPNE3-211ENST00000621526 NFAT5O94916 1531 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 SBNO2Q9Y2G9 1366 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 KLRG2A4D1S0 409 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-211ENST00000621526 TRPA1O75762 1119 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 SRGNP10124 158 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 PHKG2P15735 406 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 LMOD1P29536 600 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-211ENST00000621526 CRKLP46109 303 aaKnown RBP3.39□□□□□ -1.87
CPNE3-211ENST00000621526 FKBP4Q02790 459 aaKnown RBP eCLIP3.39□□□□□ -1.87
CPNE3-211ENST00000621526 GRM1Q13255 1194 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 USPL1Q5W0Q7 1092 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 CC2D2BQ6DHV5 1058 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 FBXO46Q6PJ61 603 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-211ENST00000621526 BICDL1Q6ZP65 573 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 CDC37L1Q7L3B6 337 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 JDP2Q8WYK2 163 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 OTUD5Q96G74 571 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 MASTLQ96GX5 879 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 CSRNP1Q96S65 589 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 VPS33BQ9H267 617 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 SLC12A5Q9H2X9 1139 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 CUL9Q8IWT3 2517 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 TNRC6CQ9HCJ0 1690 aaKnown RBP3.39□□□□□ -1.87
CPNE3-211ENST00000621526 LY75O60449 1722 aa3.39□□□□□ -1.87
CPNE3-211ENST00000621526 KIF24Q5T7B8 1368 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 TONSLQ96HA7 1378 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 AKAP12Q02952 1782 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 FAM155AB1AL88 458 aaPredicted RBP3.38□□□□□ -1.87
CPNE3-211ENST00000621526 CELF2O95319 508 aaKnown RBP3.38□□□□□ -1.87
CPNE3-211ENST00000621526 FBLN1P23142 703 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 ALDH1B1P30837 517 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 EPS15P42566 896 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 EIF6P56537 245 aaKnown RBP3.38□□□□□ -1.87
CPNE3-211ENST00000621526 KIF23Q02241 960 aaPredicted RBP3.38□□□□□ -1.87
CPNE3-211ENST00000621526 FMR1Q06787 632 aaKnown RBP eCLIP3.38□□□□□ -1.87
CPNE3-211ENST00000621526 CCDC93Q567U6 631 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 HSP90AB2PQ58FF8 381 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 RGMBQ6NW40 437 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 ANKRD13DQ6ZTN6 518 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 TMC1Q8TDI8 760 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 ZIC5Q96T25 663 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 BCL2L12Q9HB09 334 aa3.38□□□□□ -1.87
CPNE3-211ENST00000621526 ADARB2Q9NS39 739 aaKnown RBP3.38□□□□□ -1.87
CPNE3-211ENST00000621526 C4BP0C0L5 1744 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 ITSN1Q15811 1721 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 A0A087WZG4 1122 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 TRAF5O00463 557 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 FYB1O15117 783 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 IARSP41252 1262 aaKnown RBP3.37□□□□□ -1.87
CPNE3-211ENST00000621526 SCNN1DP51172 638 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 HUNKP57058 714 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 CABP4P57796 275 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 GPR153Q6NV75 609 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 PRPF40BQ6NWY9 871 aaKnown RBP3.37□□□□□ -1.87
CPNE3-211ENST00000621526 SYNE4Q8N205 404 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 USHBP1Q8N6Y0 703 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 C2orf69Q8N8R5 385 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 PSMD1Q99460 953 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 CFHR5Q9BXR6 569 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 HDAC9Q9UKV0 1011 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 MEGF6O75095 1541 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 RNF123Q5XPI4 1314 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 KIF13BQ9NQT8 1826 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 RTL1A6NKG5 1358 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 KDRP35968 1356 aa3.37□□□□□ -1.87
CPNE3-211ENST00000621526 EDC4Q6P2E9 1401 aaKnown RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 A0A1W2PPC1 479 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 PTCD1O75127 700 aaKnown RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 CYP19A1P11511 503 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 NPR1P16066 1061 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 TM4SF4P48230 202 aa3.36□□□□□ -1.87
CPNE3-211ENST00000621526 EIF5P55010 431 aaKnown RBP3.36□□□□□ -1.87
CPNE3-211ENST00000621526 AMOTQ4VCS5 1084 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms