RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 PANK3Q9H999 370 aa21.33■■□□□ 1.01
SNHG28-203ENST00000621242 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
SNHG28-203ENST00000621242 ZC3H4Q9UPT8 1303 aaKnown RBP21.32■■□□□ 1
SNHG28-203ENST00000621242 TNS4Q8IZW8 715 aa21.32■■□□□ 1
SNHG28-203ENST00000621242 SOS1Q07889 1333 aaPredicted RBP21.31■■□□□ 1
SNHG28-203ENST00000621242 PRELPP51888 382 aa21.31■■□□□ 1
SNHG28-203ENST00000621242 NFIXQ14938 502 aa21.31■■□□□ 1
SNHG28-203ENST00000621242 TIAM2Q8IVF5 1701 aa21.3■■□□□ 1
SNHG28-203ENST00000621242 GLTPD2A6NH11 291 aa21.3■■□□□ 1
SNHG28-203ENST00000621242 LMNB1P20700 586 aa21.3■■□□□ 1
SNHG28-203ENST00000621242 MORC1Q86VD1 984 aa21.3■■□□□ 1
SNHG28-203ENST00000621242 NARFQ9UHQ1 456 aa21.3■■□□□ 1
SNHG28-203ENST00000621242 CYP19A1P11511 503 aaPredicted RBP21.29■■□□□ 1
SNHG28-203ENST00000621242 VEGFAP15692 232 aaPredicted RBP21.29■■□□□ 1
SNHG28-203ENST00000621242 AKAP4Q5JQC9 854 aa21.29■■□□□ 1
SNHG28-203ENST00000621242 SLC52A2Q9HAB3 445 aa21.29■■□□□ 1
SNHG28-203ENST00000621242 LGR6Q9HBX8 967 aa21.29■■□□□ 1
SNHG28-203ENST00000621242 COL15A1P39059 1388 aa21.28■■□□□ 1
SNHG28-203ENST00000621242 SERPINB2P05120 415 aa21.28■■□□□ 1
SNHG28-203ENST00000621242 SLC39A6Q13433 755 aa21.28■■□□□ 1
SNHG28-203ENST00000621242 IL13P35225 146 aa21.27■■□□□ 1
SNHG28-203ENST00000621242 TTLL6Q8N841 843 aa21.27■■□□□ 1
SNHG28-203ENST00000621242 BCL2L12Q9HB09 334 aa21.27■■□□□ 1
SNHG28-203ENST00000621242 TIMELESSQ9UNS1 1208 aa21.27■■□□□ 1
SNHG28-203ENST00000621242 ZBTB1Q9Y2K1 713 aa21.27■■□□□ 1
SNHG28-203ENST00000621242 HSPA1AP0DMV8 641 aaKnown RBP21.25■□□□□ 0.99
SNHG28-203ENST00000621242 HSPA1BP0DMV9 641 aaKnown RBP21.25■□□□□ 0.99
SNHG28-203ENST00000621242 C2CD5Q86YS7 1000 aa21.25■□□□□ 0.99
SNHG28-203ENST00000621242 DICER1Q9UPY3 1922 aaKnown RBP21.25■□□□□ 0.99
SNHG28-203ENST00000621242 NFKBIEO00221 500 aa21.24■□□□□ 0.99
SNHG28-203ENST00000621242 RNMTO43148 476 aaKnown RBP21.24■□□□□ 0.99
SNHG28-203ENST00000621242 CARMIL3Q8ND23 1372 aa21.23■□□□□ 0.99
SNHG28-203ENST00000621242 H0YIN7 160 aa21.23■□□□□ 0.99
SNHG28-203ENST00000621242 MRC1P22897 1456 aa21.23■□□□□ 0.99
SNHG28-203ENST00000621242 ANKRD31Q8N7Z5 1873 aa21.22■□□□□ 0.99
SNHG28-203ENST00000621242 POTECB2RU33 542 aa21.22■□□□□ 0.99
SNHG28-203ENST00000621242 HSPA5P11021 654 aaKnown RBP21.21■□□□□ 0.99
SNHG28-203ENST00000621242 CANXP27824 592 aaKnown RBP21.21■□□□□ 0.99
SNHG28-203ENST00000621242 BICDL1Q6ZP65 573 aa21.21■□□□□ 0.99
SNHG28-203ENST00000621242 UBR2Q8IWV8 1755 aa21.2■□□□□ 0.99
SNHG28-203ENST00000621242 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
SNHG28-203ENST00000621242 EIF4G2P78344 907 aaKnown RBP eCLIP21.2■□□□□ 0.98
SNHG28-203ENST00000621242 HMOX1P09601 288 aa21.19■□□□□ 0.98
SNHG28-203ENST00000621242 DPY19L2Q6NUT2 758 aa21.19■□□□□ 0.98
SNHG28-203ENST00000621242 VSIG10Q8N0Z9 540 aa21.19■□□□□ 0.98
SNHG28-203ENST00000621242 ZNF622Q969S3 477 aaKnown RBP eCLIP21.18■□□□□ 0.98
SNHG28-203ENST00000621242 ZNF219Q9P2Y4 722 aaPredicted RBP21.18■□□□□ 0.98
SNHG28-203ENST00000621242 KNSTRNQ9Y448 316 aa21.18■□□□□ 0.98
SNHG28-203ENST00000621242 CACNA1SQ13698 1873 aa21.18■□□□□ 0.98
SNHG28-203ENST00000621242 EIF5P55010 431 aaKnown RBP21.17■□□□□ 0.98
SNHG28-203ENST00000621242 MTHFSDQ2M296 383 aaKnown RBP21.17■□□□□ 0.98
SNHG28-203ENST00000621242 COL11A2P13942 1736 aaPredicted RBP21.17■□□□□ 0.98
SNHG28-203ENST00000621242 C21orf2O43822 256 aa21.16■□□□□ 0.98
SNHG28-203ENST00000621242 TBC1D9BQ66K14 1250 aa21.16■□□□□ 0.98
SNHG28-203ENST00000621242 ERFEQ4G0M1 354 aa21.15■□□□□ 0.98
SNHG28-203ENST00000621242 CCDC24Q8N4L8 307 aa21.15■□□□□ 0.98
SNHG28-203ENST00000621242 A0A087WZG4 1122 aa21.14■□□□□ 0.97
SNHG28-203ENST00000621242 STARD3NLO95772 234 aa21.14■□□□□ 0.97
SNHG28-203ENST00000621242 BRIP1Q9BX63 1249 aa21.14■□□□□ 0.97
SNHG28-203ENST00000621242 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
SNHG28-203ENST00000621242 PDE6BP35913 854 aa21.13■□□□□ 0.97
SNHG28-203ENST00000621242 PRR5LQ6MZQ0 368 aa21.13■□□□□ 0.97
SNHG28-203ENST00000621242 TTC5Q8N0Z6 440 aa21.13■□□□□ 0.97
SNHG28-203ENST00000621242 PDZRN3Q9UPQ7 1066 aa21.13■□□□□ 0.97
SNHG28-203ENST00000621242 SLX4Q8IY92 1834 aa21.13■□□□□ 0.97
SNHG28-203ENST00000621242 CHADLQ6NUI6 762 aa21.12■□□□□ 0.97
SNHG28-203ENST00000621242 TBC1D2BQ9UPU7 963 aa21.12■□□□□ 0.97
SNHG28-203ENST00000621242 POTEIP0CG38 1075 aa21.11■□□□□ 0.97
SNHG28-203ENST00000621242 POTEJP0CG39 1038 aa21.11■□□□□ 0.97
SNHG28-203ENST00000621242 AMER1Q5JTC6 1135 aaPredicted RBP21.11■□□□□ 0.97
SNHG28-203ENST00000621242 CREBZFQ9NS37 354 aa21.11■□□□□ 0.97
SNHG28-203ENST00000621242 MKRN1Q9UHC7 482 aaKnown RBP21.11■□□□□ 0.97
SNHG28-203ENST00000621242 ZNF330Q9Y3S2 320 aaPredicted RBP21.11■□□□□ 0.97
SNHG28-203ENST00000621242 DDNO94850 711 aaPredicted RBP21.1■□□□□ 0.97
SNHG28-203ENST00000621242 ZNF496Q96IT1 587 aaPredicted RBP21.1■□□□□ 0.97
SNHG28-203ENST00000621242 TAOK3Q9H2K8 898 aa21.09■□□□□ 0.97
SNHG28-203ENST00000621242 LTBP3Q9NS15 1303 aa21.08■□□□□ 0.97
SNHG28-203ENST00000621242 SIPA1L3O60292 1781 aaPredicted RBP21.08■□□□□ 0.97
SNHG28-203ENST00000621242 ARFGEF2Q9Y6D5 1785 aa21.08■□□□□ 0.97
SNHG28-203ENST00000621242 DIAPH1O60610 1272 aaKnown RBP21.08■□□□□ 0.97
SNHG28-203ENST00000621242 HEG1Q9ULI3 1381 aa21.08■□□□□ 0.96
SNHG28-203ENST00000621242 CLSPNQ9HAW4 1339 aa21.07■□□□□ 0.96
SNHG28-203ENST00000621242 ZNF790Q6PG37 636 aa21.07■□□□□ 0.96
SNHG28-203ENST00000621242 TEX13AQ9BXU3 409 aaPredicted RBP21.07■□□□□ 0.96
SNHG28-203ENST00000621242 IL6STP40189 918 aaPredicted RBP21.06■□□□□ 0.96
SNHG28-203ENST00000621242 CNKSR1Q969H4 720 aa21.06■□□□□ 0.96
SNHG28-203ENST00000621242 SETDB2Q96T68 719 aa21.06■□□□□ 0.96
SNHG28-203ENST00000621242 SCN4AP35499 1836 aa21.06■□□□□ 0.96
SNHG28-203ENST00000621242 NPHP1O15259 732 aa21.05■□□□□ 0.96
SNHG28-203ENST00000621242 TEFQ10587 303 aa21.05■□□□□ 0.96
SNHG28-203ENST00000621242 PRPF40BQ6NWY9 871 aaKnown RBP21.05■□□□□ 0.96
SNHG28-203ENST00000621242 CNBD1Q8NA66 436 aa21.05■□□□□ 0.96
SNHG28-203ENST00000621242 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
SNHG28-203ENST00000621242 A1BGP04217 495 aa21.04■□□□□ 0.96
SNHG28-203ENST00000621242 SRGNP10124 158 aa21.04■□□□□ 0.96
SNHG28-203ENST00000621242 STYK1Q6J9G0 422 aa21.04■□□□□ 0.96
SNHG28-203ENST00000621242 BCORQ6W2J9 1755 aa21.04■□□□□ 0.96
SNHG28-203ENST00000621242 CNTNAP1P78357 1384 aa21.03■□□□□ 0.96
SNHG28-203ENST00000621242 FOXN1O15353 648 aa21.03■□□□□ 0.96
SNHG28-203ENST00000621242 CAMTA2O94983 1202 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms