RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 TEFQ10587 303 aa15.25■□□□□ 0.03
LINC00649-218ENST00000620580 TTC5Q8N0Z6 440 aa15.25■□□□□ 0.03
LINC00649-218ENST00000620580 VSIG10Q8N0Z9 540 aa15.25■□□□□ 0.03
LINC00649-218ENST00000620580 POLRMTO00411 1230 aaKnown RBP15.24■□□□□ 0.03
LINC00649-218ENST00000620580 KCNA3P22001 575 aa15.24■□□□□ 0.03
LINC00649-218ENST00000620580 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
LINC00649-218ENST00000620580 ZNF526Q8TF50 670 aaPredicted RBP15.24■□□□□ 0.03
LINC00649-218ENST00000620580 BCL2L12Q9HB09 334 aa15.24■□□□□ 0.03
LINC00649-218ENST00000620580 NUDCQ9Y266 331 aa15.24■□□□□ 0.03
LINC00649-218ENST00000620580 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
LINC00649-218ENST00000620580 NARFQ9UHQ1 456 aa15.23■□□□□ 0.03
LINC00649-218ENST00000620580 COL15A1P39059 1388 aa15.23■□□□□ 0.03
LINC00649-218ENST00000620580 UBR2Q8IWV8 1755 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 FCHSD2O94868 740 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 CHRNA5P30532 468 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 NFIXQ14938 502 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 MCM10Q7L590 875 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 ADCY9O60503 1353 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 CEMIPQ8WUJ3 1361 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 HEG1Q9ULI3 1381 aa15.22■□□□□ 0.03
LINC00649-218ENST00000620580 BTBD11A6QL63 1104 aa15.21■□□□□ 0.03
LINC00649-218ENST00000620580 STARD3NLO95772 234 aa15.21■□□□□ 0.03
LINC00649-218ENST00000620580 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
LINC00649-218ENST00000620580 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
LINC00649-218ENST00000620580 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.02
LINC00649-218ENST00000620580 A1BGP04217 495 aa15.2■□□□□ 0.02
LINC00649-218ENST00000620580 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
LINC00649-218ENST00000620580 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
LINC00649-218ENST00000620580 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
LINC00649-218ENST00000620580 PRAMEF22A3QJZ6 481 aa15.19■□□□□ 0.02
LINC00649-218ENST00000620580 BICDL1Q6ZP65 573 aa15.19■□□□□ 0.02
LINC00649-218ENST00000620580 FMNL2Q96PY5 1086 aa15.19■□□□□ 0.02
LINC00649-218ENST00000620580 GPBP1L1Q9HC44 474 aaPredicted RBP15.19■□□□□ 0.02
LINC00649-218ENST00000620580 SERPINB2P05120 415 aa15.18■□□□□ 0.02
LINC00649-218ENST00000620580 PIP4K2AP48426 406 aaPredicted RBP15.18■□□□□ 0.02
LINC00649-218ENST00000620580 PIM2Q9P1W9 311 aa15.18■□□□□ 0.02
LINC00649-218ENST00000620580 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
LINC00649-218ENST00000620580 USP16Q9Y5T5 823 aa15.18■□□□□ 0.02
LINC00649-218ENST00000620580 BRCA1P38398 1863 aaKnown RBP15.18■□□□□ 0.02
LINC00649-218ENST00000620580 RTF1Q92541 710 aaKnown RBP15.17■□□□□ 0.02
LINC00649-218ENST00000620580 TEX13AQ9BXU3 409 aaPredicted RBP15.17■□□□□ 0.02
LINC00649-218ENST00000620580 AFDNP55196 1824 aaKnown RBP15.17■□□□□ 0.02
LINC00649-218ENST00000620580 DALRD3Q5D0E6 543 aaKnown RBP15.16■□□□□ 0.02
LINC00649-218ENST00000620580 TBC1D9BQ66K14 1250 aa15.16■□□□□ 0.02
LINC00649-218ENST00000620580 CCDC24Q8N4L8 307 aa15.16■□□□□ 0.02
LINC00649-218ENST00000620580 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
LINC00649-218ENST00000620580 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
LINC00649-218ENST00000620580 A0A087WZG4 1122 aa15.15■□□□□ 0.02
LINC00649-218ENST00000620580 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
LINC00649-218ENST00000620580 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
LINC00649-218ENST00000620580 C9orf131Q5VYM1 1079 aa15.13■□□□□ 0.01
LINC00649-218ENST00000620580 PLEKHF1Q96S99 279 aa15.13■□□□□ 0.01
LINC00649-218ENST00000620580 NRXN2Q9P2S2 1712 aa15.12■□□□□ 0.01
LINC00649-218ENST00000620580 KIF3CO14782 793 aa15.12■□□□□ 0.01
LINC00649-218ENST00000620580 HTATSF1O43719 755 aaKnown RBP15.12■□□□□ 0.01
LINC00649-218ENST00000620580 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
LINC00649-218ENST00000620580 TAF7Q15545 349 aaPredicted RBP15.12■□□□□ 0.01
LINC00649-218ENST00000620580 THUMPD2Q9BTF0 503 aaKnown RBP15.12■□□□□ 0.01
LINC00649-218ENST00000620580 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
LINC00649-218ENST00000620580 CEP350Q5VT06 3117 aa15.11■□□□□ 0.01
LINC00649-218ENST00000620580 NBPF26B4DH59 902 aa15.11■□□□□ 0.01
LINC00649-218ENST00000620580 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
LINC00649-218ENST00000620580 NBPF10Q6P3W6 841 aaKnown RBP15.11■□□□□ 0.01
LINC00649-218ENST00000620580 C2CD5Q86YS7 1000 aa15.11■□□□□ 0.01
LINC00649-218ENST00000620580 NBPF15Q8N660 670 aa15.11■□□□□ 0.01
LINC00649-218ENST00000620580 PRR5LQ6MZQ0 368 aa15.1■□□□□ 0.01
LINC00649-218ENST00000620580 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
LINC00649-218ENST00000620580 RASSF7Q02833 373 aa15.09■□□□□ 0.01
LINC00649-218ENST00000620580 NFE2L2Q16236 605 aa15.09■□□□□ 0.01
LINC00649-218ENST00000620580 NPM2Q86SE8 214 aaKnown RBP15.09■□□□□ 0.01
LINC00649-218ENST00000620580 NMRK2Q9NPI5 230 aa15.09■□□□□ 0.01
LINC00649-218ENST00000620580 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
LINC00649-218ENST00000620580 H0YIN7 160 aa15.08■□□□□ 0
LINC00649-218ENST00000620580 NEFMP07197 916 aa15.08■□□□□ 0
LINC00649-218ENST00000620580 PRELPP51888 382 aa15.08■□□□□ 0
LINC00649-218ENST00000620580 TTLL6Q8N841 843 aa15.08■□□□□ 0
LINC00649-218ENST00000620580 SETDB2Q96T68 719 aa15.08■□□□□ 0
LINC00649-218ENST00000620580 RNF181Q9P0P0 153 aa15.08■□□□□ 0
LINC00649-218ENST00000620580 SCN7AQ01118 1682 aa15.08■□□□□ 0
LINC00649-218ENST00000620580 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00649-218ENST00000620580 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
LINC00649-218ENST00000620580 ANKRD31Q8N7Z5 1873 aa15.07■□□□□ 0
LINC00649-218ENST00000620580 SBF1O95248 1867 aa15.06■□□□□ 0
LINC00649-218ENST00000620580 RALBP1Q15311 655 aa15.06■□□□□ 0
LINC00649-218ENST00000620580 BRIP1Q9BX63 1249 aa15.06■□□□□ 0
LINC00649-218ENST00000620580 EIF4A1P60842 406 aaKnown RBP15.05■□□□□ -0
LINC00649-218ENST00000620580 HLFQ16534 295 aa15.05■□□□□ -0
LINC00649-218ENST00000620580 NGEFQ8N5V2 710 aa15.05■□□□□ -0
LINC00649-218ENST00000620580 CNBD1Q8NA66 436 aa15.05■□□□□ -0
LINC00649-218ENST00000620580 MAPK8IP3Q9UPT6 1336 aa15.04■□□□□ -0
LINC00649-218ENST00000620580 NFKBIEO00221 500 aa15.04■□□□□ -0
LINC00649-218ENST00000620580 NPHP1O15259 732 aa15.04■□□□□ -0
LINC00649-218ENST00000620580 PDE6BP35913 854 aa15.04■□□□□ -0
LINC00649-218ENST00000620580 BCORQ6W2J9 1755 aa15.03■□□□□ -0
LINC00649-218ENST00000620580 DLEC1Q9Y238 1755 aa15.03■□□□□ -0
LINC00649-218ENST00000620580 FAM177BA6PVY3 158 aa15.03■□□□□ -0
LINC00649-218ENST00000620580 HSPA6P17066 643 aa15.03■□□□□ -0
LINC00649-218ENST00000620580 RIPK4P57078 832 aa15.03■□□□□ -0
LINC00649-218ENST00000620580 CLEC4GQ6UXB4 293 aa15.03■□□□□ -0
LINC00649-218ENST00000620580 PNISRQ8TF01 805 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms