RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 FOSBP53539 338 aa19.38■□□□□ 0.69
DKC1-213ENST00000620277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.38■□□□□ 0.69
DKC1-213ENST00000620277 TPM2P07951 284 aa19.37■□□□□ 0.69
DKC1-213ENST00000620277 CAMK4Q16566 473 aa19.37■□□□□ 0.69
DKC1-213ENST00000620277 PRPF40BQ6NWY9 871 aaKnown RBP19.37■□□□□ 0.69
DKC1-213ENST00000620277 MPRIPQ6WCQ1 1025 aa19.37■□□□□ 0.69
DKC1-213ENST00000620277 RHPN1Q8TCX5 695 aa19.37■□□□□ 0.69
DKC1-213ENST00000620277 STK3Q13188 491 aa19.36■□□□□ 0.69
DKC1-213ENST00000620277 CRB1P82279 1406 aa19.36■□□□□ 0.69
DKC1-213ENST00000620277 ADCK5Q3MIX3 580 aa19.36■□□□□ 0.69
DKC1-213ENST00000620277 PKNOX2Q96KN3 472 aa19.36■□□□□ 0.69
DKC1-213ENST00000620277 NEO1Q92859 1461 aa19.35■□□□□ 0.69
DKC1-213ENST00000620277 PRAMEF22A3QJZ6 481 aa19.35■□□□□ 0.69
DKC1-213ENST00000620277 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
DKC1-213ENST00000620277 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
DKC1-213ENST00000620277 SMC3Q9UQE7 1217 aa19.35■□□□□ 0.69
DKC1-213ENST00000620277 RIMS1Q86UR5 1692 aaKnown RBP19.35■□□□□ 0.69
DKC1-213ENST00000620277 MBD3O95983 291 aa19.35■□□□□ 0.69
DKC1-213ENST00000620277 DNM1Q05193 864 aaKnown RBP19.35■□□□□ 0.69
DKC1-213ENST00000620277 SNX14Q9Y5W7 946 aa19.35■□□□□ 0.69
DKC1-213ENST00000620277 NDUFB9Q9Y6M9 179 aa19.35■□□□□ 0.69
DKC1-213ENST00000620277 PTH1RQ03431 593 aa19.34■□□□□ 0.69
DKC1-213ENST00000620277 PIP4K2AP48426 406 aaPredicted RBP19.34■□□□□ 0.69
DKC1-213ENST00000620277 CWF19L2Q2TBE0 894 aaKnown RBP19.34■□□□□ 0.69
DKC1-213ENST00000620277 KLHDC4Q8TBB5 520 aa19.34■□□□□ 0.69
DKC1-213ENST00000620277 DIAPH3Q9NSV4 1193 aa19.34■□□□□ 0.69
DKC1-213ENST00000620277 SYT1P21579 422 aa19.33■□□□□ 0.69
DKC1-213ENST00000620277 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.69
DKC1-213ENST00000620277 OSBPL3Q9H4L5 887 aa19.33■□□□□ 0.69
DKC1-213ENST00000620277 ANKRD26Q9UPS8 1709 aa19.33■□□□□ 0.69
DKC1-213ENST00000620277 KIAA0232Q92628 1395 aa19.33■□□□□ 0.69
DKC1-213ENST00000620277 HDGFP51858 240 aaKnown RBP19.33■□□□□ 0.69
DKC1-213ENST00000620277 CCDC39Q9UFE4 941 aa19.33■□□□□ 0.69
DKC1-213ENST00000620277 ADCY5O95622 1261 aa19.33■□□□□ 0.68
DKC1-213ENST00000620277 RUFY3Q7L099 469 aa19.33■□□□□ 0.68
DKC1-213ENST00000620277 PDLIM2Q96JY6 352 aa19.33■□□□□ 0.68
DKC1-213ENST00000620277 C9orf78Q9NZ63 289 aaPredicted RBP19.32■□□□□ 0.68
DKC1-213ENST00000620277 TFIP11Q9UBB9 837 aaKnown RBP19.31■□□□□ 0.68
DKC1-213ENST00000620277 IBTKQ9P2D0 1353 aaPredicted RBP19.31■□□□□ 0.68
DKC1-213ENST00000620277 WDR33Q9C0J8 1336 aaKnown RBP19.31■□□□□ 0.68
DKC1-213ENST00000620277 CUL4AQ13619 759 aa19.31■□□□□ 0.68
DKC1-213ENST00000620277 SYAP1Q96A49 352 aaPredicted RBP19.31■□□□□ 0.68
DKC1-213ENST00000620277 STX6O43752 255 aa19.3■□□□□ 0.68
DKC1-213ENST00000620277 GJB2P29033 226 aa19.3■□□□□ 0.68
DKC1-213ENST00000620277 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
DKC1-213ENST00000620277 TCHHQ07283 1943 aa19.3■□□□□ 0.68
DKC1-213ENST00000620277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.3■□□□□ 0.68
DKC1-213ENST00000620277 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
DKC1-213ENST00000620277 SALL3Q9BXA9 1300 aa19.3■□□□□ 0.68
DKC1-213ENST00000620277 CKAP2LQ8IYA6 745 aa19.29■□□□□ 0.68
DKC1-213ENST00000620277 HOXC9P31274 260 aa19.29■□□□□ 0.68
DKC1-213ENST00000620277 HSPA4P34932 840 aa19.29■□□□□ 0.68
DKC1-213ENST00000620277 MCM2P49736 904 aa19.29■□□□□ 0.68
DKC1-213ENST00000620277 CEBPZQ03701 1054 aaKnown RBP19.29■□□□□ 0.68
DKC1-213ENST00000620277 PROSER3Q2NL68 480 aa19.29■□□□□ 0.68
DKC1-213ENST00000620277 FBXW7Q969H0 707 aa19.29■□□□□ 0.68
DKC1-213ENST00000620277 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
DKC1-213ENST00000620277 CHGBP05060 677 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 CDC42BPGQ6DT37 1551 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 CNTROBQ8N137 903 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 PDCL3Q9H2J4 239 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 BOLA2Q9H3K6 86 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 SGSM2O43147 1006 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 TEFQ10587 303 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 PI4K2BQ8TCG2 481 aa19.28■□□□□ 0.68
DKC1-213ENST00000620277 DLC1Q96QB1 1528 aa19.27■□□□□ 0.68
DKC1-213ENST00000620277 ZSCAN22P10073 491 aaPredicted RBP19.27■□□□□ 0.68
DKC1-213ENST00000620277 AACSQ86V21 672 aa19.27■□□□□ 0.68
DKC1-213ENST00000620277 IFIT2P09913 472 aaKnown RBP19.27■□□□□ 0.68
DKC1-213ENST00000620277 KIAA2012Q0VF49 1180 aa19.27■□□□□ 0.68
DKC1-213ENST00000620277 TAF6LQ9Y6J9 622 aa19.27■□□□□ 0.68
DKC1-213ENST00000620277 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
DKC1-213ENST00000620277 USP6P35125 1406 aa19.26■□□□□ 0.67
DKC1-213ENST00000620277 NAP1L2Q9ULW6 460 aaPredicted RBP19.26■□□□□ 0.67
DKC1-213ENST00000620277 LIMCH1Q9UPQ0 1083 aa19.26■□□□□ 0.67
DKC1-213ENST00000620277 CLTCQ00610 1675 aaKnown RBP19.26■□□□□ 0.67
DKC1-213ENST00000620277 CEP170BQ9Y4F5 1589 aaPredicted RBP19.26■□□□□ 0.67
DKC1-213ENST00000620277 PLEKHG3A1L390 1219 aa19.26■□□□□ 0.67
DKC1-213ENST00000620277 NBPF6Q5VWK0 638 aa19.26■□□□□ 0.67
DKC1-213ENST00000620277 DNAAF4Q8WXU2 420 aa19.26■□□□□ 0.67
DKC1-213ENST00000620277 NBPF4Q96M43 638 aa19.26■□□□□ 0.67
DKC1-213ENST00000620277 FLT4P35916 1363 aa19.25■□□□□ 0.67
DKC1-213ENST00000620277 ZNF500O60304 480 aaPredicted RBP19.25■□□□□ 0.67
DKC1-213ENST00000620277 KIF1BPQ96EK5 621 aa19.25■□□□□ 0.67
DKC1-213ENST00000620277 DDX11Q96FC9 970 aa19.25■□□□□ 0.67
DKC1-213ENST00000620277 MYL6BP14649 208 aa19.25■□□□□ 0.67
DKC1-213ENST00000620277 LSG1Q9H089 658 aaKnown RBP19.25■□□□□ 0.67
DKC1-213ENST00000620277 MAP3K2Q9Y2U5 619 aa19.25■□□□□ 0.67
DKC1-213ENST00000620277 EID1Q9Y6B2 187 aa19.25■□□□□ 0.67
DKC1-213ENST00000620277 CLASRPQ8N2M8 674 aaKnown RBP19.24■□□□□ 0.67
DKC1-213ENST00000620277 SSH3Q8TE77 659 aa19.24■□□□□ 0.67
DKC1-213ENST00000620277 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
DKC1-213ENST00000620277 BTBD11A6QL63 1104 aa19.24■□□□□ 0.67
DKC1-213ENST00000620277 TLR7Q9NYK1 1049 aaKnown RBP19.24■□□□□ 0.67
DKC1-213ENST00000620277 INTS4Q96HW7 963 aaKnown RBP19.23■□□□□ 0.67
DKC1-213ENST00000620277 RPAP1Q9BWH6 1393 aaPredicted RBP19.23■□□□□ 0.67
DKC1-213ENST00000620277 A0A087WWV3 80 aa19.23■□□□□ 0.67
DKC1-213ENST00000620277 AP5Z1O43299 807 aa19.23■□□□□ 0.67
DKC1-213ENST00000620277 F13A1P00488 732 aa19.23■□□□□ 0.67
DKC1-213ENST00000620277 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms