RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 ABTB2Q8N961 1025 aa17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 TOPAZ1Q8N9V7 1692 aa17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 HOXC9P31274 260 aa17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 CWC27Q6UX04 472 aaKnown RBP17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
PCDHGA3-203ENST00000619750 BRD1O95696 1058 aa17.39■□□□□ 0.37
PCDHGA3-203ENST00000619750 LGR6Q9HBX8 967 aa17.39■□□□□ 0.37
PCDHGA3-203ENST00000619750 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
PCDHGA3-203ENST00000619750 KCNA6P17658 529 aa17.38■□□□□ 0.37
PCDHGA3-203ENST00000619750 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
PCDHGA3-203ENST00000619750 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
PCDHGA3-203ENST00000619750 TCHHQ07283 1943 aa17.37■□□□□ 0.37
PCDHGA3-203ENST00000619750 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA3-203ENST00000619750 KDRP35968 1356 aa17.37■□□□□ 0.37
PCDHGA3-203ENST00000619750 PI4KAP2A4QPH2 592 aa17.36■□□□□ 0.37
PCDHGA3-203ENST00000619750 OS9Q13438 667 aaPredicted RBP17.36■□□□□ 0.37
PCDHGA3-203ENST00000619750 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
PCDHGA3-203ENST00000619750 PI4KAP1Q8N8J0 262 aa17.36■□□□□ 0.37
PCDHGA3-203ENST00000619750 RHPN1Q8TCX5 695 aa17.36■□□□□ 0.37
PCDHGA3-203ENST00000619750 CNPY2Q9Y2B0 182 aa17.36■□□□□ 0.37
PCDHGA3-203ENST00000619750 CUL4AQ13619 759 aa17.35■□□□□ 0.37
PCDHGA3-203ENST00000619750 ZNF830Q96NB3 372 aaPredicted RBP17.35■□□□□ 0.37
PCDHGA3-203ENST00000619750 SSH2Q76I76 1423 aa17.35■□□□□ 0.37
PCDHGA3-203ENST00000619750 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
PCDHGA3-203ENST00000619750 FMN2Q9NZ56 1722 aa17.35■□□□□ 0.37
PCDHGA3-203ENST00000619750 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 PA2G4Q9UQ80 394 aaKnown RBP17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 LARGE1O95461 756 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 NWD1Q149M9 1564 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 NALCNQ8IZF0 1738 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 KDM4FA0A1W2PPD8 638 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 FIBPO43427 364 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 AK2P54819 239 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 MPRIPQ6WCQ1 1025 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 PI4K2BQ8TCG2 481 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 PDLIM2Q96JY6 352 aa17.34■□□□□ 0.37
PCDHGA3-203ENST00000619750 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
PCDHGA3-203ENST00000619750 SNX14Q9Y5W7 946 aa17.33■□□□□ 0.36
PCDHGA3-203ENST00000619750 OFD1O75665 1012 aa17.33■□□□□ 0.36
PCDHGA3-203ENST00000619750 COL9A3Q14050 684 aaPredicted RBP17.33■□□□□ 0.36
PCDHGA3-203ENST00000619750 SSH3Q8TE77 659 aa17.33■□□□□ 0.36
PCDHGA3-203ENST00000619750 STAP2Q9UGK3 403 aa17.33■□□□□ 0.36
PCDHGA3-203ENST00000619750 TSPY26PQ9H489 355 aa17.32■□□□□ 0.36
PCDHGA3-203ENST00000619750 FAM13BQ9NYF5 915 aa17.32■□□□□ 0.36
PCDHGA3-203ENST00000619750 NOL7Q9UMY1 257 aaKnown RBP17.32■□□□□ 0.36
PCDHGA3-203ENST00000619750 HSPA4P34932 840 aa17.32■□□□□ 0.36
PCDHGA3-203ENST00000619750 CHMP3Q9Y3E7 222 aa17.32■□□□□ 0.36
PCDHGA3-203ENST00000619750 FAM208AQ9UK61 1670 aaKnown RBP17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 MBD3O95983 291 aa17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 MCM2P49736 904 aa17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 NBPF6Q5VWK0 638 aa17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 NBPF4Q96M43 638 aa17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 PIK3C2AO00443 1686 aa17.31■□□□□ 0.36
PCDHGA3-203ENST00000619750 SGSM2O43147 1006 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 CWF19L2Q2TBE0 894 aaKnown RBP17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 ADCK5Q3MIX3 580 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 RUFY3Q7L099 469 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 TCEANC2Q96MN5 208 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 RPAP1Q9BWH6 1393 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 ANAPC15P60006 121 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 PTH1RQ03431 593 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 PROSER3Q2NL68 480 aa17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA3-203ENST00000619750 ANKARQ7Z5J8 1434 aa17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 RRP9O43818 475 aaKnown RBP17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 ZKSCAN5Q9Y2L8 839 aa17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 HCLS1P14317 486 aaPredicted RBP17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 PRPF40BQ6NWY9 871 aaKnown RBP17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 TUBGCP6Q96RT7 1819 aa17.29■□□□□ 0.36
PCDHGA3-203ENST00000619750 NECAB1Q8N987 351 aa17.28■□□□□ 0.36
PCDHGA3-203ENST00000619750 DNAAF4Q8WXU2 420 aa17.28■□□□□ 0.36
PCDHGA3-203ENST00000619750 INTS4Q96HW7 963 aaKnown RBP17.28■□□□□ 0.36
PCDHGA3-203ENST00000619750 LSG1Q9H089 658 aaKnown RBP17.28■□□□□ 0.36
PCDHGA3-203ENST00000619750 RAD50Q92878 1312 aa17.28■□□□□ 0.36
PCDHGA3-203ENST00000619750 SYT1P21579 422 aa17.28■□□□□ 0.36
PCDHGA3-203ENST00000619750 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
PCDHGA3-203ENST00000619750 EIF4A1P60842 406 aaKnown RBP17.27■□□□□ 0.36
PCDHGA3-203ENST00000619750 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
PCDHGA3-203ENST00000619750 KIF1BPQ96EK5 621 aa17.27■□□□□ 0.36
PCDHGA3-203ENST00000619750 SIL1Q9H173 461 aa17.27■□□□□ 0.36
PCDHGA3-203ENST00000619750 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.36
PCDHGA3-203ENST00000619750 TPM2P07951 284 aa17.27■□□□□ 0.35
PCDHGA3-203ENST00000619750 BEND3Q5T5X7 828 aa17.27■□□□□ 0.35
PCDHGA3-203ENST00000619750 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms