RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 KIF20AO95235 890 aa10.42□□□□□ -0.74
C9orf72-206ENST00000619707 GIMAP6Q6P9H5 292 aa10.42□□□□□ -0.74
C9orf72-206ENST00000619707 G2E3Q7L622 706 aa10.42□□□□□ -0.74
C9orf72-206ENST00000619707 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
C9orf72-206ENST00000619707 STAP2Q9UGK3 403 aa10.42□□□□□ -0.74
C9orf72-206ENST00000619707 SMC3Q9UQE7 1217 aa10.42□□□□□ -0.74
C9orf72-206ENST00000619707 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 F13A1P00488 732 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 GNAI3P08754 354 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 SYT1P21579 422 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 SPC24Q8NBT2 197 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 ZNF592Q92610 1267 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 PYCARDQ9ULZ3 195 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 TUBGCP6Q96RT7 1819 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 UNC5CLQ8IV45 518 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 TMED8Q6PL24 325 aaPredicted RBP10.41□□□□□ -0.74
C9orf72-206ENST00000619707 FUCA2Q9BTY2 467 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 KCNF1Q9H3M0 494 aa10.41□□□□□ -0.74
C9orf72-206ENST00000619707 PNMA6EA0A0J9YXQ4 647 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 ATP8B2P98198 1209 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 EIF4A2Q14240 407 aaKnown RBP10.4□□□□□ -0.74
C9orf72-206ENST00000619707 STK31Q9BXU1 1019 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 LIMCH1Q9UPQ0 1083 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 AOX1Q06278 1338 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 CCDC192P0DO97 292 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 ANKRD7Q92527 254 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 TSPYL4Q9UJ04 414 aa10.4□□□□□ -0.74
C9orf72-206ENST00000619707 DLC1Q96QB1 1528 aa10.4□□□□□ -0.75
C9orf72-206ENST00000619707 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.75
C9orf72-206ENST00000619707 AK2P54819 239 aa10.4□□□□□ -0.75
C9orf72-206ENST00000619707 PLCD3Q8N3E9 789 aa10.4□□□□□ -0.75
C9orf72-206ENST00000619707 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
C9orf72-206ENST00000619707 RAPGEF3O95398 923 aa10.39□□□□□ -0.75
C9orf72-206ENST00000619707 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
C9orf72-206ENST00000619707 IL25Q9H293 177 aa10.39□□□□□ -0.75
C9orf72-206ENST00000619707 SNX14Q9Y5W7 946 aa10.39□□□□□ -0.75
C9orf72-206ENST00000619707 RAD50Q92878 1312 aa10.39□□□□□ -0.75
C9orf72-206ENST00000619707 PREX1Q8TCU6 1659 aa10.39□□□□□ -0.75
C9orf72-206ENST00000619707 AP5Z1O43299 807 aa10.39□□□□□ -0.75
C9orf72-206ENST00000619707 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
C9orf72-206ENST00000619707 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
C9orf72-206ENST00000619707 CTIFO43310 598 aaKnown RBP10.38□□□□□ -0.75
C9orf72-206ENST00000619707 DNM1Q05193 864 aaKnown RBP10.38□□□□□ -0.75
C9orf72-206ENST00000619707 RTF1Q92541 710 aaKnown RBP10.38□□□□□ -0.75
C9orf72-206ENST00000619707 TTC14Q96N46 770 aa10.38□□□□□ -0.75
C9orf72-206ENST00000619707 CRB1P82279 1406 aa10.38□□□□□ -0.75
C9orf72-206ENST00000619707 CPS1P31327 1500 aa10.38□□□□□ -0.75
C9orf72-206ENST00000619707 RUFY3Q7L099 469 aa10.38□□□□□ -0.75
C9orf72-206ENST00000619707 NUDT16Q96DE0 195 aaKnown RBP10.38□□□□□ -0.75
C9orf72-206ENST00000619707 FEZ1Q99689 392 aa10.38□□□□□ -0.75
C9orf72-206ENST00000619707 IL1RAPL2Q9NP60 686 aa10.38□□□□□ -0.75
C9orf72-206ENST00000619707 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
C9orf72-206ENST00000619707 LRRFIP2Q9Y608 721 aaKnown RBP10.38□□□□□ -0.75
C9orf72-206ENST00000619707 ARHGEF10O15013 1369 aa10.38□□□□□ -0.75
C9orf72-206ENST00000619707 NRKQ7Z2Y5 1582 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 DIP2CQ9Y2E4 1556 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 SGSM2O43147 1006 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 PTGS1P23219 599 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 GJB2P29033 226 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 FLIIQ13045 1269 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 FAM200AQ8TCP9 573 aa10.37□□□□□ -0.75
C9orf72-206ENST00000619707 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
C9orf72-206ENST00000619707 CCDC61Q9Y6R9 512 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 VPS37CA5D8V6 355 aaPredicted RBP10.36□□□□□ -0.75
C9orf72-206ENST00000619707 CASTP20810 708 aaKnown RBP10.36□□□□□ -0.75
C9orf72-206ENST00000619707 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 DRC7Q8IY82 874 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 RASEFQ8IZ41 740 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 MTMR6Q9Y217 621 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 SOS1Q07889 1333 aaPredicted RBP10.36□□□□□ -0.75
C9orf72-206ENST00000619707 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 MAP3K11Q16584 847 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
C9orf72-206ENST00000619707 CNTROBQ8N137 903 aa10.36□□□□□ -0.75
C9orf72-206ENST00000619707 LSG1Q9H089 658 aaKnown RBP10.36□□□□□ -0.75
C9orf72-206ENST00000619707 UBTFL1P0CB47 393 aaPredicted RBP10.35□□□□□ -0.75
C9orf72-206ENST00000619707 NUP62CLQ9H1M0 184 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 OGFRQ9NZT2 677 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 MON2Q7Z3U7 1717 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 SMTNL1A8MU46 457 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 NCBP1Q09161 790 aaKnown RBP10.35□□□□□ -0.75
C9orf72-206ENST00000619707 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 KCNG1Q9UIX4 513 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 RAB11FIP3O75154 756 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 LARGE1O95461 756 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 CPA1P15085 419 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 SYCP1Q15431 976 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 CWC27Q6UX04 472 aaKnown RBP10.35□□□□□ -0.75
C9orf72-206ENST00000619707 ZNF771Q7L3S4 317 aaPredicted RBP10.35□□□□□ -0.75
C9orf72-206ENST00000619707 ZSCAN31Q96LW9 406 aaPredicted RBP10.35□□□□□ -0.75
C9orf72-206ENST00000619707 C16orf45Q96MC5 204 aaPredicted RBP10.35□□□□□ -0.75
C9orf72-206ENST00000619707 CHMP3Q9Y3E7 222 aa10.35□□□□□ -0.75
C9orf72-206ENST00000619707 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
C9orf72-206ENST00000619707 SURF6O75683 361 aaKnown RBP10.34□□□□□ -0.75
C9orf72-206ENST00000619707 KRT85P78386 507 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 TYRO3Q06418 890 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 CCDC186Q7Z3E2 898 aa10.34□□□□□ -0.75
C9orf72-206ENST00000619707 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms