RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
TARDBP-221ENST00000619555 PIM2Q9P1W9 311 aa15.02■□□□□ -0
TARDBP-221ENST00000619555 NARFQ9UHQ1 456 aa15.02■□□□□ -0
TARDBP-221ENST00000619555 GNAT3A8MTJ3 354 aa15.01□□□□□ -0.01
TARDBP-221ENST00000619555 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
TARDBP-221ENST00000619555 GAS2L2Q8NHY3 880 aa15.01□□□□□ -0.01
TARDBP-221ENST00000619555 BCL2L12Q9HB09 334 aa15.01□□□□□ -0.01
TARDBP-221ENST00000619555 COL15A1P39059 1388 aa15□□□□□ -0.01
TARDBP-221ENST00000619555 KIF3CO14782 793 aa15□□□□□ -0.01
TARDBP-221ENST00000619555 TEFQ10587 303 aa15□□□□□ -0.01
TARDBP-221ENST00000619555 NFIXQ14938 502 aa15□□□□□ -0.01
TARDBP-221ENST00000619555 DALRD3Q5D0E6 543 aaKnown RBP15□□□□□ -0.01
TARDBP-221ENST00000619555 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
TARDBP-221ENST00000619555 PHACTR3Q96KR7 559 aa15□□□□□ -0.01
TARDBP-221ENST00000619555 UBR2Q8IWV8 1755 aa14.99□□□□□ -0.01
TARDBP-221ENST00000619555 ZNF496Q96IT1 587 aaPredicted RBP14.99□□□□□ -0.01
TARDBP-221ENST00000619555 ARFGEF1Q9Y6D6 1849 aa14.99□□□□□ -0.01
TARDBP-221ENST00000619555 STARD3NLO95772 234 aa14.98□□□□□ -0.01
TARDBP-221ENST00000619555 PRKAR2BP31323 418 aa14.98□□□□□ -0.01
TARDBP-221ENST00000619555 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
TARDBP-221ENST00000619555 ZNF790Q6PG37 636 aa14.98□□□□□ -0.01
TARDBP-221ENST00000619555 CFAP53Q96M91 514 aa14.98□□□□□ -0.01
TARDBP-221ENST00000619555 AFDNP55196 1824 aaKnown RBP14.98□□□□□ -0.01
TARDBP-221ENST00000619555 KCNQ3O43525 872 aa14.97□□□□□ -0.01
TARDBP-221ENST00000619555 SERPINB2P05120 415 aa14.97□□□□□ -0.01
TARDBP-221ENST00000619555 EIF5P55010 431 aaKnown RBP14.97□□□□□ -0.01
TARDBP-221ENST00000619555 RSPH6AQ9H0K4 717 aa14.97□□□□□ -0.01
TARDBP-221ENST00000619555 HEG1Q9ULI3 1381 aa14.97□□□□□ -0.01
TARDBP-221ENST00000619555 HSPA6P17066 643 aa14.96□□□□□ -0.01
TARDBP-221ENST00000619555 PPP2R1AP30153 589 aa14.96□□□□□ -0.01
TARDBP-221ENST00000619555 BICDL1Q6ZP65 573 aa14.96□□□□□ -0.01
TARDBP-221ENST00000619555 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.02
TARDBP-221ENST00000619555 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
TARDBP-221ENST00000619555 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.023e-7■■■□□ 15.3
TARDBP-221ENST00000619555 NMRK2Q9NPI5 230 aa14.95□□□□□ -0.02
TARDBP-221ENST00000619555 NUDCQ9Y266 331 aa14.95□□□□□ -0.02
TARDBP-221ENST00000619555 CEMIPQ8WUJ3 1361 aa14.95□□□□□ -0.02
TARDBP-221ENST00000619555 A0A087WZG4 1122 aa14.94□□□□□ -0.02
TARDBP-221ENST00000619555 A1BGP04217 495 aa14.94□□□□□ -0.02
TARDBP-221ENST00000619555 FMNL2Q96PY5 1086 aa14.94□□□□□ -0.02
TARDBP-221ENST00000619555 TEX13AQ9BXU3 409 aaPredicted RBP14.94□□□□□ -0.02
TARDBP-221ENST00000619555 TBC1D2BQ9UPU7 963 aa14.94□□□□□ -0.02
TARDBP-221ENST00000619555 ZNF330Q9Y3S2 320 aaPredicted RBP14.94□□□□□ -0.02
TARDBP-221ENST00000619555 NRXN2Q9P2S2 1712 aa14.94□□□□□ -0.02
TARDBP-221ENST00000619555 BTBD11A6QL63 1104 aa14.93□□□□□ -0.02
TARDBP-221ENST00000619555 TBC1D9BQ66K14 1250 aa14.93□□□□□ -0.02
TARDBP-221ENST00000619555 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
TARDBP-221ENST00000619555 CARMIL3Q8ND23 1372 aa14.93□□□□□ -0.02
TARDBP-221ENST00000619555 C2CD5Q86YS7 1000 aa14.92□□□□□ -0.02
TARDBP-221ENST00000619555 SBF1O95248 1867 aa14.92□□□□□ -0.02
TARDBP-221ENST00000619555 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
TARDBP-221ENST00000619555 IL6STP40189 918 aaPredicted RBP14.91□□□□□ -0.02
TARDBP-221ENST00000619555 MCM10Q7L590 875 aa14.91□□□□□ -0.02
TARDBP-221ENST00000619555 CCDC24Q8N4L8 307 aa14.91□□□□□ -0.02
TARDBP-221ENST00000619555 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
TARDBP-221ENST00000619555 PRAMEF22A3QJZ6 481 aa14.9□□□□□ -0.02
TARDBP-221ENST00000619555 H0YIN7 160 aa14.9□□□□□ -0.02
TARDBP-221ENST00000619555 TOMM70O94826 608 aa14.9□□□□□ -0.02
TARDBP-221ENST00000619555 PIP4K2AP48426 406 aaPredicted RBP14.9□□□□□ -0.02
TARDBP-221ENST00000619555 RASSF7Q02833 373 aa14.9□□□□□ -0.02
TARDBP-221ENST00000619555 DCTN1Q14203 1278 aa14.9□□□□□ -0.02
TARDBP-221ENST00000619555 TTLL6Q8N841 843 aa14.9□□□□□ -0.02
TARDBP-221ENST00000619555 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
TARDBP-221ENST00000619555 CAMTA2O94983 1202 aa14.89□□□□□ -0.03
TARDBP-221ENST00000619555 PRELPP51888 382 aa14.89□□□□□ -0.03
TARDBP-221ENST00000619555 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
TARDBP-221ENST00000619555 PRR5LQ6MZQ0 368 aa14.88□□□□□ -0.03
TARDBP-221ENST00000619555 NPM2Q86SE8 214 aaKnown RBP14.88□□□□□ -0.03
TARDBP-221ENST00000619555 SCN7AQ01118 1682 aa14.87□□□□□ -0.03
TARDBP-221ENST00000619555 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
TARDBP-221ENST00000619555 DZIP3Q86Y13 1208 aaKnown RBP14.87□□□□□ -0.03
TARDBP-221ENST00000619555 ZNF622Q969S3 477 aaKnown RBP eCLIP14.87□□□□□ -0.033e-23■□□□□ 9.1
TARDBP-221ENST00000619555 BRIP1Q9BX63 1249 aa14.87□□□□□ -0.03
TARDBP-221ENST00000619555 RRAGCQ9HB90 399 aa14.87□□□□□ -0.03
TARDBP-221ENST00000619555 KDM2BQ8NHM5 1336 aa14.87□□□□□ -0.03
TARDBP-221ENST00000619555 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
TARDBP-221ENST00000619555 SNRPA1P09661 255 aaKnown RBP14.86□□□□□ -0.03
TARDBP-221ENST00000619555 SETDB2Q96T68 719 aa14.86□□□□□ -0.03
TARDBP-221ENST00000619555 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
TARDBP-221ENST00000619555 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
TARDBP-221ENST00000619555 NFKBIEO00221 500 aa14.85□□□□□ -0.03
TARDBP-221ENST00000619555 LMNB1P20700 586 aa14.85□□□□□ -0.03
TARDBP-221ENST00000619555 PDE6BP35913 854 aa14.85□□□□□ -0.03
TARDBP-221ENST00000619555 APLP1P51693 650 aa14.85□□□□□ -0.03
TARDBP-221ENST00000619555 C16orf71Q8IYS4 520 aaPredicted RBP14.85□□□□□ -0.03
TARDBP-221ENST00000619555 RBM46Q8TBY0 533 aaKnown RBP14.85□□□□□ -0.03
TARDBP-221ENST00000619555 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
TARDBP-221ENST00000619555 NBPF26B4DH59 902 aa14.84□□□□□ -0.03
TARDBP-221ENST00000619555 TAF7Q15545 349 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-221ENST00000619555 NBPF10Q6P3W6 841 aaKnown RBP14.84□□□□□ -0.03
TARDBP-221ENST00000619555 NBPF15Q8N660 670 aa14.84□□□□□ -0.03
TARDBP-221ENST00000619555 CNBD1Q8NA66 436 aa14.84□□□□□ -0.03
TARDBP-221ENST00000619555 NPHP1O15259 732 aa14.83□□□□□ -0.04
TARDBP-221ENST00000619555 C21orf2O43822 256 aa14.83□□□□□ -0.04
TARDBP-221ENST00000619555 PDZRN3Q9UPQ7 1066 aa14.83□□□□□ -0.04
TARDBP-221ENST00000619555 COL11A2P13942 1736 aaPredicted RBP14.83□□□□□ -0.04
TARDBP-221ENST00000619555 ST5P78524 1137 aa14.82□□□□□ -0.04
TARDBP-221ENST00000619555 DNAJC5GQ8N7S2 189 aa14.82□□□□□ -0.04
TARDBP-221ENST00000619555 ZC3H4Q9UPT8 1303 aaKnown RBP14.82□□□□□ -0.04
TARDBP-221ENST00000619555 BCORQ6W2J9 1755 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms