RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	CLEC17A	Q6ZS10	378 aa		13.67	□□□□□ -0.22
TP53-223	ENST00000618944	TMX3	Q96JJ7	454 aa		13.67	□□□□□ -0.22
TP53-223	ENST00000618944	MARF1	Q9Y4F3	1742 aa	Known RBP	13.67	□□□□□ -0.22
TP53-223	ENST00000618944	RNMT	O43148	476 aa	Known RBP	13.66	□□□□□ -0.22
TP53-223	ENST00000618944	CYP2E1	P05181	493 aa	Predicted RBP	13.66	□□□□□ -0.22
TP53-223	ENST00000618944	MCC	P23508	829 aa		13.66	□□□□□ -0.22
TP53-223	ENST00000618944	POLA2	Q14181	598 aa		13.66	□□□□□ -0.22
TP53-223	ENST00000618944	PROSER3	Q2NL68	480 aa		13.66	□□□□□ -0.22
TP53-223	ENST00000618944	ARHGEF25	Q86VW2	580 aa		13.66	□□□□□ -0.22
TP53-223	ENST00000618944	ZDHHC9	Q9Y397	364 aa		13.66	□□□□□ -0.22
TP53-223	ENST00000618944	RAB11FIP3	O75154	756 aa		13.66	□□□□□ -0.22
TP53-223	ENST00000618944	UPF3B	Q9BZI7	483 aa	Known RBP	13.66	□□□□□ -0.22
TP53-223	ENST00000618944	LRRC37A3	O60309	1634 aa		13.66	□□□□□ -0.22
TP53-223	ENST00000618944	PRPF40A	O75400	957 aa	Known RBP	13.65	□□□□□ -0.22
TP53-223	ENST00000618944	OS9	Q13438	667 aa	Predicted RBP	13.65	□□□□□ -0.22
TP53-223	ENST00000618944	ZC3H6	P61129	1189 aa	Known RBP	13.65	□□□□□ -0.22
TP53-223	ENST00000618944	AMOT	Q4VCS5	1084 aa		13.65	□□□□□ -0.22
TP53-223	ENST00000618944	MAP3K2	Q9Y2U5	619 aa		13.65	□□□□□ -0.22
TP53-223	ENST00000618944	DBF4	Q9UBU7	674 aa	Predicted RBP	13.64	□□□□□ -0.23
TP53-223	ENST00000618944	HOXB7	P09629	217 aa		13.64	□□□□□ -0.23
TP53-223	ENST00000618944	AIMP1	Q12904	312 aa	Known RBP	13.64	□□□□□ -0.23
TP53-223	ENST00000618944	KLHL40	Q2TBA0	621 aa		13.64	□□□□□ -0.23
TP53-223	ENST00000618944	CWF19L2	Q2TBE0	894 aa	Known RBP	13.64	□□□□□ -0.23
TP53-223	ENST00000618944	CAVIN1	Q6NZI2	390 aa	Known RBP	13.64	□□□□□ -0.23
TP53-223	ENST00000618944	KRT28	Q7Z3Y7	464 aa		13.64	□□□□□ -0.23
TP53-223	ENST00000618944	PI4K2B	Q8TCG2	481 aa		13.64	□□□□□ -0.23
TP53-223	ENST00000618944	KIF1BP	Q96EK5	621 aa		13.64	□□□□□ -0.23
TP53-223	ENST00000618944	LMBRD1	Q9NUN5	540 aa		13.64	□□□□□ -0.23
TP53-223	ENST00000618944	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.64	□□□□□ -0.23
TP53-223	ENST00000618944	ADCY9	O60503	1353 aa		13.64	□□□□□ -0.23
TP53-223	ENST00000618944	AK9	Q5TCS8	1911 aa		13.63	□□□□□ -0.23
TP53-223	ENST00000618944	GIGYF1	O75420	1035 aa	Predicted RBP	13.63	□□□□□ -0.23
TP53-223	ENST00000618944	NFAT5	O94916	1531 aa		13.63	□□□□□ -0.23
TP53-223	ENST00000618944	FAM208A	Q9UK61	1670 aa	Known RBP	13.63	□□□□□ -0.23
TP53-223	ENST00000618944	PA2G4	Q9UQ80	394 aa	Known RBP	13.63	□□□□□ -0.23
TP53-223	ENST00000618944	ADGRL3	Q9HAR2	1447 aa		13.62	□□□□□ -0.23
TP53-223	ENST00000618944	PROSER2	Q86WR7	435 aa	Predicted RBP	13.62	□□□□□ -0.23
TP53-223	ENST00000618944	SLC39A6	Q13433	755 aa		13.62	□□□□□ -0.23
TP53-223	ENST00000618944	CWC27	Q6UX04	472 aa	Known RBP	13.62	□□□□□ -0.23
TP53-223	ENST00000618944	ISY1	Q9ULR0	285 aa	Known RBP	13.62	□□□□□ -0.23
TP53-223	ENST00000618944	PXDNL	A1KZ92	1463 aa		13.62	□□□□□ -0.23
TP53-223	ENST00000618944	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.61	□□□□□ -0.23
TP53-223	ENST00000618944	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.61	□□□□□ -0.23
TP53-223	ENST00000618944	DDX17	Q92841	729 aa	Known RBP	13.61	□□□□□ -0.23
TP53-223	ENST00000618944	LARP6	Q9BRS8	491 aa	Known RBP	13.61	□□□□□ -0.23
TP53-223	ENST00000618944	CHMP4A	Q9BY43	222 aa		13.61	□□□□□ -0.23
TP53-223	ENST00000618944	LTN1	O94822	1766 aa		13.61	□□□□□ -0.23
TP53-223	ENST00000618944	AOX1	Q06278	1338 aa		13.61	□□□□□ -0.23
TP53-223	ENST00000618944	ANAPC15	P60006	121 aa		13.61	□□□□□ -0.23
TP53-223	ENST00000618944	KSR2	Q6VAB6	950 aa		13.61	□□□□□ -0.23
TP53-223	ENST00000618944	RBM27	Q9P2N5	1060 aa	Known RBP	13.61	□□□□□ -0.23
TP53-223	ENST00000618944	PXDN	Q92626	1479 aa		13.6	□□□□□ -0.23
TP53-223	ENST00000618944	MCM2	P49736	904 aa		13.6	□□□□□ -0.23
TP53-223	ENST00000618944	SPG7	Q9UQ90	795 aa		13.6	□□□□□ -0.23
TP53-223	ENST00000618944	CNTROB	Q8N137	903 aa		13.6	□□□□□ -0.23
TP53-223	ENST00000618944	GPT2	Q8TD30	523 aa		13.6	□□□□□ -0.23
TP53-223	ENST00000618944	SGSM2	O43147	1006 aa		13.59	□□□□□ -0.23
TP53-223	ENST00000618944	MYL6B	P14649	208 aa		13.59	□□□□□ -0.23
TP53-223	ENST00000618944	HSPA4	P34932	840 aa		13.59	□□□□□ -0.23
TP53-223	ENST00000618944	NLRP2	Q9NX02	1062 aa		13.59	□□□□□ -0.23
TP53-223	ENST00000618944	CHD2	O14647	1828 aa	Known RBP	13.59	□□□□□ -0.23
TP53-223	ENST00000618944	ZSCAN23	Q3MJ62	389 aa		13.59	□□□□□ -0.23
TP53-223	ENST00000618944	HSP90AB4P	Q58FF6	505 aa		13.59	□□□□□ -0.23
TP53-223	ENST00000618944	CLASRP	Q8N2M8	674 aa	Known RBP	13.59	□□□□□ -0.23
TP53-223	ENST00000618944	CUL4A	Q13619	759 aa		13.58	□□□□□ -0.24
TP53-223	ENST00000618944	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.58	□□□□□ -0.24
TP53-223	ENST00000618944	NPHP4	O75161	1426 aa	Predicted RBP	13.58	□□□□□ -0.24
TP53-223	ENST00000618944	NASP	P49321	788 aa	Predicted RBP	13.58	□□□□□ -0.24
TP53-223	ENST00000618944	KIAA1211	Q6ZU35	1233 aa		13.58	□□□□□ -0.24
TP53-223	ENST00000618944	RASEF	Q8IZ41	740 aa		13.58	□□□□□ -0.24
TP53-223	ENST00000618944	RGPD2	P0DJD1	1756 aa		13.57	□□□□□ -0.24
TP53-223	ENST00000618944	IFIT2	P09913	472 aa	Known RBP	13.57	□□□□□ -0.24
TP53-223	ENST00000618944	CPA1	P15085	419 aa		13.57	□□□□□ -0.24
TP53-223	ENST00000618944	NFATC2IP	Q8NCF5	419 aa		13.57	□□□□□ -0.24
TP53-223	ENST00000618944	TRIM44	Q96DX7	344 aa	Predicted RBP	13.57	□□□□□ -0.24
TP53-223	ENST00000618944	SUCLG2	Q96I99	432 aa		13.57	□□□□□ -0.24
TP53-223	ENST00000618944	LSG1	Q9H089	658 aa	Known RBP	13.57	□□□□□ -0.24
TP53-223	ENST00000618944	HYPK	Q9NX55	129 aa		13.57	□□□□□ -0.24
TP53-223	ENST00000618944	SNX14	Q9Y5W7	946 aa		13.57	□□□□□ -0.24
TP53-223	ENST00000618944	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.57	□□□□□ -0.24
TP53-223	ENST00000618944	USP54	Q70EL1	1684 aa		13.57	□□□□□ -0.24
TP53-223	ENST00000618944	DTNB	O60941	627 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	ALDH1L1	O75891	902 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	PIP4K2A	P48426	406 aa	Predicted RBP	13.56	□□□□□ -0.24
TP53-223	ENST00000618944	RIC3	Q7Z5B4	369 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	CABLES1	Q8TDN4	633 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	RAPGEF4	Q8WZA2	1011 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	GLRX3	O76003	335 aa	Known RBP	13.56	□□□□□ -0.24
TP53-223	ENST00000618944	BRD1	O95696	1058 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	PDIA6	Q15084	440 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	AACS	Q86V21	672 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	JARID2	Q92833	1246 aa	Predicted RBP	13.56	□□□□□ -0.24
TP53-223	ENST00000618944	KAZALD1	Q96I82	304 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	SIL1	Q9H173	461 aa		13.56	□□□□□ -0.24
TP53-223	ENST00000618944	BICC1	Q9H694	974 aa	Known RBP	13.56	□□□□□ -0.24
TP53-223	ENST00000618944	MED1	Q15648	1581 aa	Predicted RBP	13.56	□□□□□ -0.24
TP53-223	ENST00000618944	GRM8	O00222	908 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	KLHDC4	Q8TBB5	520 aa		13.55	□□□□□ -0.24
TP53-223	ENST00000618944	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.55	□□□□□ -0.24
TP53-223	ENST00000618944	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms