RNA–Protein interactions for RNA: ENST00000618687.4

LINC01515-216, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-216ENST00000618687 XPCQ01831 940 aaPredicted RBP8.37□□□□□ -1.07
LINC01515-216ENST00000618687 EXOSC9Q06265 439 aaKnown RBP8.37□□□□□ -1.07
LINC01515-216ENST00000618687 ZKSCAN2Q63HK3 967 aa8.37□□□□□ -1.07
LINC01515-216ENST00000618687 ARIH1Q9Y4X5 557 aaPredicted RBP8.37□□□□□ -1.07
LINC01515-216ENST00000618687 GNAT3A8MTJ3 354 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 CHL1O00533 1208 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 PLEKHO1Q53GL0 409 aaPredicted RBP8.36□□□□□ -1.07
LINC01515-216ENST00000618687 ANKRD13DQ6ZTN6 518 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 ARHGAP45Q92619 1136 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
LINC01515-216ENST00000618687 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 AXIN2Q9Y2T1 843 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 CRB1P82279 1406 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 LRRC37A3O60309 1634 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 NHSL1Q5SYE7 1610 aa8.36□□□□□ -1.07
LINC01515-216ENST00000618687 LMO7Q8WWI1 1683 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 BCAR3O75815 825 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 FOSBP53539 338 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 MTHFSDQ2M296 383 aaKnown RBP8.35□□□□□ -1.07
LINC01515-216ENST00000618687 FTSJ3Q8IY81 847 aaKnown RBP8.35□□□□□ -1.07
LINC01515-216ENST00000618687 ZNF454Q8N9F8 522 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 EXOC6Q8TAG9 804 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 CRBNQ96SW2 442 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
LINC01515-216ENST00000618687 AHDC1Q5TGY3 1603 aaPredicted RBP8.34□□□□□ -1.07
LINC01515-216ENST00000618687 PSDA5PKW4 1024 aaPredicted RBP8.34□□□□□ -1.07
LINC01515-216ENST00000618687 PLIN1O60240 522 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 PDIA6Q15084 440 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 NBPF6Q5VWK0 638 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 B4GALNT3Q6L9W6 998 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 CENPQQ7L2Z9 268 aaPredicted RBP8.34□□□□□ -1.07
LINC01515-216ENST00000618687 DDX12PQ92771 950 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
LINC01515-216ENST00000618687 LTV1Q96GA3 475 aaPredicted RBP8.34□□□□□ -1.07
LINC01515-216ENST00000618687 NBPF4Q96M43 638 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 CRYBG1Q9Y4K1 1723 aa8.34□□□□□ -1.07
LINC01515-216ENST00000618687 LTBP4Q8N2S1 1624 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 VAMP4O75379 141 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 HOXB7P09629 217 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 PBX2P40425 430 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 TWISTNBQ3B726 338 aaPredicted RBP8.33□□□□□ -1.08
LINC01515-216ENST00000618687 AKAP4Q5JQC9 854 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 C1orf141Q5JVX7 400 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 ATF7IPQ6VMQ6 1270 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 DZIP1LQ8IYY4 767 aaKnown RBP8.33□□□□□ -1.08
LINC01515-216ENST00000618687 SSH1Q8WYL5 1049 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 RAPGEF4Q8WZA2 1011 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 DDX19BQ9UMR2 479 aa8.33□□□□□ -1.08
LINC01515-216ENST00000618687 LAS1LQ9Y4W2 734 aaKnown RBP8.33□□□□□ -1.08
LINC01515-216ENST00000618687 PTPRCP08575 1304 aa8.32□□□□□ -1.08
LINC01515-216ENST00000618687 SPDYE16A6NNV3 312 aaPredicted RBP8.32□□□□□ -1.08
LINC01515-216ENST00000618687 PTGER2P43116 358 aa8.32□□□□□ -1.08
LINC01515-216ENST00000618687 MVPQ14764 893 aaKnown RBP8.32□□□□□ -1.08
LINC01515-216ENST00000618687 FRAT1Q92837 279 aaPredicted RBP8.32□□□□□ -1.08
LINC01515-216ENST00000618687 LRRC59Q96AG4 307 aaKnown RBP8.32□□□□□ -1.08
LINC01515-216ENST00000618687 CLUAP1Q96AJ1 413 aa8.32□□□□□ -1.08
LINC01515-216ENST00000618687 THUMPD2Q9BTF0 503 aaKnown RBP8.32□□□□□ -1.08
LINC01515-216ENST00000618687 API5Q9BZZ5 524 aaKnown RBP8.32□□□□□ -1.08
LINC01515-216ENST00000618687 PRDM11Q9NQV5 511 aa8.32□□□□□ -1.08
LINC01515-216ENST00000618687 TSPYL4Q9UJ04 414 aa8.32□□□□□ -1.08
LINC01515-216ENST00000618687 DLG5Q8TDM6 1919 aa8.32□□□□□ -1.08
LINC01515-216ENST00000618687 ZBTB7CA1YPR0 619 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 FAM83GA6ND36 823 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 HSP90AB1P08238 724 aaKnown RBP8.31□□□□□ -1.08
LINC01515-216ENST00000618687 TRIM27P14373 513 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 PSEN2P49810 448 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
LINC01515-216ENST00000618687 PPP4R3BQ5MIZ7 849 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 C20orf194Q5TEA3 1177 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 ZNF530Q6P9A1 599 aaPredicted RBP8.31□□□□□ -1.08
LINC01515-216ENST00000618687 MCM10Q7L590 875 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 RNF166Q96A37 237 aaPredicted RBP8.31□□□□□ -1.08
LINC01515-216ENST00000618687 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 SPG7Q9UQ90 795 aa8.31□□□□□ -1.08
LINC01515-216ENST00000618687 WDR17Q8IZU2 1322 aa8.3□□□□□ -1.08
LINC01515-216ENST00000618687 COL18A1P39060 1754 aa8.3□□□□□ -1.08
LINC01515-216ENST00000618687 CSB-PGBD3P0DP91 1061 aa8.3□□□□□ -1.08
LINC01515-216ENST00000618687 TATP17735 454 aaPredicted RBP8.3□□□□□ -1.08
LINC01515-216ENST00000618687 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
LINC01515-216ENST00000618687 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC01515-216ENST00000618687 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
LINC01515-216ENST00000618687 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 COL22A1Q8NFW1 1626 aaPredicted RBP8.29□□□□□ -1.08
LINC01515-216ENST00000618687 GRXCR2A6NFK2 248 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 TCERG1O14776 1098 aaKnown RBP8.29□□□□□ -1.08
LINC01515-216ENST00000618687 MLLT3P42568 568 aaPredicted RBP8.29□□□□□ -1.08
LINC01515-216ENST00000618687 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
LINC01515-216ENST00000618687 TEFQ10587 303 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 DCTN1Q14203 1278 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
LINC01515-216ENST00000618687 C8orf58Q8NAV2 365 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 DDX17Q92841 729 aaKnown RBP8.29□□□□□ -1.08
LINC01515-216ENST00000618687 ZDHHC16Q969W1 377 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 BCL2L13Q9BXK5 485 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 STK31Q9BXU1 1019 aa8.29□□□□□ -1.08
LINC01515-216ENST00000618687 COL5A2P05997 1499 aaPredicted RBP8.29□□□□□ -1.08
LINC01515-216ENST00000618687 ABCA3Q99758 1704 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms