RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TRIM11Q96F44 468 aa7.44□□□□□ -1.22
TARDBP-220ENST00000618606 ETNK1Q9HBU6 452 aa7.44□□□□□ -1.22
TARDBP-220ENST00000618606 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
TARDBP-220ENST00000618606 USP4Q13107 963 aa7.43□□□□□ -1.22
TARDBP-220ENST00000618606 HCN2Q9UL51 889 aa7.43□□□□□ -1.22
TARDBP-220ENST00000618606 ATP4AP20648 1035 aa7.42□□□□□ -1.22
TARDBP-220ENST00000618606 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
TARDBP-220ENST00000618606 TNP2Q05952 138 aa7.42□□□□□ -1.22
TARDBP-220ENST00000618606 RSPO4Q2I0M5 234 aaPredicted RBP7.42□□□□□ -1.22
TARDBP-220ENST00000618606 KRTAP1-3Q8IUG1 177 aa7.42□□□□□ -1.22
TARDBP-220ENST00000618606 PLVAPQ9BX97 442 aa7.42□□□□□ -1.22
TARDBP-220ENST00000618606 NDUFB9Q9Y6M9 179 aa7.42□□□□□ -1.22
TARDBP-220ENST00000618606 MAPTP10636 758 aaKnown RBP7.41□□□□□ -1.22
TARDBP-220ENST00000618606 NKAPLQ5M9Q1 402 aa7.41□□□□□ -1.22
TARDBP-220ENST00000618606 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
TARDBP-220ENST00000618606 ZNF468Q5VIY5 522 aaPredicted RBP7.4□□□□□ -1.22
TARDBP-220ENST00000618606 PHTF2Q8N3S3 785 aa7.4□□□□□ -1.22
TARDBP-220ENST00000618606 A0A1W2PNR3 127 aa7.39□□□□□ -1.23
TARDBP-220ENST00000618606 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
TARDBP-220ENST00000618606 CD33P20138 364 aa7.39□□□□□ -1.23
TARDBP-220ENST00000618606 TSGA10IPQ3SY00 556 aa7.39□□□□□ -1.23
TARDBP-220ENST00000618606 FOXD4L6Q3SYB3 417 aaPredicted RBP7.39□□□□□ -1.23
TARDBP-220ENST00000618606 FOXD4L3Q6VB84 417 aaPredicted RBP7.39□□□□□ -1.23
TARDBP-220ENST00000618606 NIFKQ9BYG3 293 aaKnown RBP7.39□□□□□ -1.23
TARDBP-220ENST00000618606 DOLKQ9UPQ8 538 aa7.39□□□□□ -1.23
TARDBP-220ENST00000618606 MTMR14Q8NCE2 650 aa7.38□□□□□ -1.23
TARDBP-220ENST00000618606 AIDAQ96BJ3 306 aa7.38□□□□□ -1.23
TARDBP-220ENST00000618606 SIRT1Q96EB6 747 aa7.38□□□□□ -1.23
TARDBP-220ENST00000618606 SCO2A0A1W2PP80 73 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 APBB1O00213 710 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 KHNYNO15037 678 aaKnown RBP7.37□□□□□ -1.23
TARDBP-220ENST00000618606 INHAP05111 366 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 FAM157BP0CG42 384 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 SCNN1DP51172 638 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 KRTAP4-12Q9BQ66 201 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 SNRKQ9NRH2 765 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 TPSG1Q9NRR2 321 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 CHIC2Q9UKJ5 165 aa7.37□□□□□ -1.23
TARDBP-220ENST00000618606 PCBP4P57723 403 aaKnown RBP7.36□□□□□ -1.23
TARDBP-220ENST00000618606 ARSJQ5FYB0 599 aaPredicted RBP7.36□□□□□ -1.23
TARDBP-220ENST00000618606 ARTNQ5T4W7 220 aa7.36□□□□□ -1.23
TARDBP-220ENST00000618606 ZNF295-AS1Q8N0V1 137 aa7.36□□□□□ -1.23
TARDBP-220ENST00000618606 MDFIQ99750 246 aa7.36□□□□□ -1.23
TARDBP-220ENST00000618606 ZDHHC3Q9NYG2 299 aa7.36□□□□□ -1.23
TARDBP-220ENST00000618606 PRR12Q9ULL5 1215 aa7.36□□□□□ -1.23
TARDBP-220ENST00000618606 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
TARDBP-220ENST00000618606 ELOA3DA6NLF2 546 aaPredicted RBP7.35□□□□□ -1.23
TARDBP-220ENST00000618606 DYRK3O43781 588 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 SMTNP53814 917 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 GDF10P55107 478 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 NBPF1Q3BBV0 1214 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 ELOA3BQ3SY89 546 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 PRRT3Q5FWE3 981 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 SAMD5Q5TGI4 173 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 ELOA3Q8NG57 546 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 ZFP64Q9NPA5 681 aa7.35□□□□□ -1.23
TARDBP-220ENST00000618606 EFSO43281 561 aa7.34□□□□□ -1.23
TARDBP-220ENST00000618606 APBA3O96018 575 aa7.34□□□□□ -1.23
TARDBP-220ENST00000618606 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
TARDBP-220ENST00000618606 SLFNL1Q499Z3 407 aa7.34□□□□□ -1.23
TARDBP-220ENST00000618606 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
TARDBP-220ENST00000618606 ZIC5Q96T25 663 aa7.34□□□□□ -1.23
TARDBP-220ENST00000618606 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
TARDBP-220ENST00000618606 TATP17735 454 aaPredicted RBP7.33□□□□□ -1.24
TARDBP-220ENST00000618606 ALAS2P22557 587 aa7.33□□□□□ -1.24
TARDBP-220ENST00000618606 EIF4G2P78344 907 aaKnown RBP eCLIP7.33□□□□□ -1.24
TARDBP-220ENST00000618606 OXLD1Q5BKU9 147 aa7.33□□□□□ -1.24
TARDBP-220ENST00000618606 SLC4A9Q96Q91 983 aa7.32□□□□□ -1.24
TARDBP-220ENST00000618606 STRN4Q9NRL3 753 aa7.32□□□□□ -1.24
TARDBP-220ENST00000618606 IQSEC3Q9UPP2 1182 aaPredicted RBP7.32□□□□□ -1.24
TARDBP-220ENST00000618606 CDK2AP1O14519 115 aa7.31□□□□□ -1.24
TARDBP-220ENST00000618606 COL9A3Q14050 684 aaPredicted RBP7.31□□□□□ -1.24
TARDBP-220ENST00000618606 MTFR1Q15390 333 aa7.31□□□□□ -1.24
TARDBP-220ENST00000618606 NACC1Q96RE7 527 aa7.31□□□□□ -1.24
TARDBP-220ENST00000618606 PRDM6Q9NQX0 595 aa7.31□□□□□ -1.24
TARDBP-220ENST00000618606 GJA3Q9Y6H8 435 aa7.31□□□□□ -1.24
TARDBP-220ENST00000618606 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
TARDBP-220ENST00000618606 SIN3BO75182 1162 aa7.3□□□□□ -1.24
TARDBP-220ENST00000618606 PRSS36Q5K4E3 855 aa7.3□□□□□ -1.24
TARDBP-220ENST00000618606 SYT9Q86SS6 491 aa7.3□□□□□ -1.24
TARDBP-220ENST00000618606 A6NJY4 79 aa7.29□□□□□ -1.24
TARDBP-220ENST00000618606 TMEM229AB2RXF0 380 aa7.28□□□□□ -1.24
TARDBP-220ENST00000618606 M0R082 166 aa7.28□□□□□ -1.24
TARDBP-220ENST00000618606 TRIM28Q13263 835 aaKnown RBP7.28□□□□□ -1.24
TARDBP-220ENST00000618606 MAP7D1Q3KQU3 841 aa7.28□□□□□ -1.24
TARDBP-220ENST00000618606 TPRNQ4KMQ1 711 aa7.28□□□□□ -1.24
TARDBP-220ENST00000618606 NBPF11Q86T75 865 aa7.28□□□□□ -1.24
TARDBP-220ENST00000618606 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
TARDBP-220ENST00000618606 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
TARDBP-220ENST00000618606 SERTAD1Q9UHV2 236 aa7.28□□□□□ -1.24
TARDBP-220ENST00000618606 BICDL1Q6ZP65 573 aa7.27□□□□□ -1.25
TARDBP-220ENST00000618606 TNFRSF25Q93038 417 aa7.27□□□□□ -1.25
TARDBP-220ENST00000618606 CABP1Q9NZU7 370 aa7.27□□□□□ -1.25
TARDBP-220ENST00000618606 TBC1D2BQ9UPU7 963 aa7.27□□□□□ -1.25
TARDBP-220ENST00000618606 STARD13Q9Y3M8 1113 aa7.27□□□□□ -1.25
TARDBP-220ENST00000618606 USP3Q9Y6I4 520 aa7.27□□□□□ -1.25
TARDBP-220ENST00000618606 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
TARDBP-220ENST00000618606 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
TARDBP-220ENST00000618606 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms