RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TERF1P54274 439 aa24.69■■□□□ 1.54
NEK3-208ENST00000618534 SYAP1Q96A49 352 aaPredicted RBP24.69■■□□□ 1.54
NEK3-208ENST00000618534 PHAXQ9H814 394 aaKnown RBP24.69■■□□□ 1.54
NEK3-208ENST00000618534 NWD1Q149M9 1564 aa24.68■■□□□ 1.54
NEK3-208ENST00000618534 WDR33Q9C0J8 1336 aaKnown RBP24.68■■□□□ 1.54
NEK3-208ENST00000618534 SURF6O75683 361 aaKnown RBP24.67■■□□□ 1.54
NEK3-208ENST00000618534 TAF7Q15545 349 aaPredicted RBP24.67■■□□□ 1.54
NEK3-208ENST00000618534 PPP1R42Q7Z4L9 355 aa24.67■■□□□ 1.54
NEK3-208ENST00000618534 USP48Q86UV5 1035 aa24.67■■□□□ 1.54
NEK3-208ENST00000618534 AMOTL2Q9Y2J4 779 aa24.67■■□□□ 1.54
NEK3-208ENST00000618534 HOXC9P31274 260 aa24.67■■□□□ 1.54
NEK3-208ENST00000618534 HDGFL1Q5TGJ6 251 aa24.67■■□□□ 1.54
NEK3-208ENST00000618534 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
NEK3-208ENST00000618534 RPAP1Q9BWH6 1393 aaPredicted RBP24.66■■□□□ 1.54
NEK3-208ENST00000618534 EPB41L2O43491 1005 aaKnown RBP24.66■■□□□ 1.54
NEK3-208ENST00000618534 MCM5P33992 734 aa24.66■■□□□ 1.54
NEK3-208ENST00000618534 NLRP6P59044 892 aa24.66■■□□□ 1.54
NEK3-208ENST00000618534 PI4K2BQ8TCG2 481 aa24.66■■□□□ 1.54
NEK3-208ENST00000618534 RAD50Q92878 1312 aa24.65■■□□□ 1.54
NEK3-208ENST00000618534 NUTM2GQ5VZR2 741 aa24.65■■□□□ 1.54
NEK3-208ENST00000618534 RAB11FIP3O75154 756 aa24.65■■□□□ 1.54
NEK3-208ENST00000618534 PLEKHG5O94827 1062 aa24.65■■□□□ 1.54
NEK3-208ENST00000618534 POLA2Q14181 598 aa24.65■■□□□ 1.54
NEK3-208ENST00000618534 RHPN1Q8TCX5 695 aa24.65■■□□□ 1.54
NEK3-208ENST00000618534 SGSM2O43147 1006 aa24.64■■□□□ 1.54
NEK3-208ENST00000618534 LTV1Q96GA3 475 aaPredicted RBP24.64■■□□□ 1.54
NEK3-208ENST00000618534 TCHHQ07283 1943 aa24.64■■□□□ 1.54
NEK3-208ENST00000618534 SNX14Q9Y5W7 946 aa24.64■■□□□ 1.53
NEK3-208ENST00000618534 PDCL3Q9H2J4 239 aa24.63■■□□□ 1.53
NEK3-208ENST00000618534 BABAM1Q9NWV8 329 aa24.63■■□□□ 1.53
NEK3-208ENST00000618534 PHF14O94880 888 aa24.62■■□□□ 1.53
NEK3-208ENST00000618534 SRGAP3O43295 1099 aa24.62■■□□□ 1.53
NEK3-208ENST00000618534 VSIG10Q8N0Z9 540 aa24.61■■□□□ 1.53
NEK3-208ENST00000618534 TTC14Q96N46 770 aa24.61■■□□□ 1.53
NEK3-208ENST00000618534 LSG1Q9H089 658 aaKnown RBP24.61■■□□□ 1.53
NEK3-208ENST00000618534 MARF1Q9Y4F3 1742 aaKnown RBP24.61■■□□□ 1.53
NEK3-208ENST00000618534 RBM10P98175 930 aaKnown RBP24.61■■□□□ 1.53
NEK3-208ENST00000618534 CSPP1Q1MSJ5 1256 aa24.61■■□□□ 1.53
NEK3-208ENST00000618534 RASEFQ8IZ41 740 aa24.61■■□□□ 1.53
NEK3-208ENST00000618534 USHBP1Q8N6Y0 703 aa24.61■■□□□ 1.53
NEK3-208ENST00000618534 KIF1BPQ96EK5 621 aa24.61■■□□□ 1.53
NEK3-208ENST00000618534 LARP6Q9BRS8 491 aaKnown RBP24.61■■□□□ 1.53
NEK3-208ENST00000618534 PTMAP06454 111 aaKnown RBP24.6■■□□□ 1.53
NEK3-208ENST00000618534 NBPF7P0C2Y1 421 aaPredicted RBP24.6■■□□□ 1.53
NEK3-208ENST00000618534 AK2P54819 239 aa24.6■■□□□ 1.53
NEK3-208ENST00000618534 CNPY2Q9Y2B0 182 aa24.6■■□□□ 1.53
NEK3-208ENST00000618534 TMEM87AQ8NBN3 555 aa24.6■■□□□ 1.53
NEK3-208ENST00000618534 EIF2S2P20042 333 aaKnown RBP24.59■■□□□ 1.53
NEK3-208ENST00000618534 CNTROBQ8N137 903 aa24.59■■□□□ 1.53
NEK3-208ENST00000618534 EID1Q9Y6B2 187 aa24.59■■□□□ 1.53
NEK3-208ENST00000618534 UQCRHLA0A096LP55 91 aa24.58■■□□□ 1.53
NEK3-208ENST00000618534 UQCRHP07919 91 aa24.58■■□□□ 1.53
NEK3-208ENST00000618534 RUFY3Q7L099 469 aa24.58■■□□□ 1.53
NEK3-208ENST00000618534 ZSCAN22P10073 491 aaPredicted RBP24.57■■□□□ 1.52
NEK3-208ENST00000618534 TPRNQ4KMQ1 711 aa24.57■■□□□ 1.52
NEK3-208ENST00000618534 CWC27Q6UX04 472 aaKnown RBP24.57■■□□□ 1.52
NEK3-208ENST00000618534 SPG7Q9UQ90 795 aa24.56■■□□□ 1.52
NEK3-208ENST00000618534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.56■■□□□ 1.52
NEK3-208ENST00000618534 CCDC183Q5T5S1 534 aa24.56■■□□□ 1.52
NEK3-208ENST00000618534 LIMCH1Q9UPQ0 1083 aa24.56■■□□□ 1.52
NEK3-208ENST00000618534 SYT1P21579 422 aa24.55■■□□□ 1.52
NEK3-208ENST00000618534 CHPF2Q9P2E5 772 aa24.55■■□□□ 1.52
NEK3-208ENST00000618534 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
NEK3-208ENST00000618534 STX6O43752 255 aa24.55■■□□□ 1.52
NEK3-208ENST00000618534 CPA1P15085 419 aa24.55■■□□□ 1.52
NEK3-208ENST00000618534 CEBPAP49715 358 aaPredicted RBP24.55■■□□□ 1.52
NEK3-208ENST00000618534 BEND3Q5T5X7 828 aa24.55■■□□□ 1.52
NEK3-208ENST00000618534 FAM184AQ8NB25 1140 aa24.54■■□□□ 1.52
NEK3-208ENST00000618534 DNAAF4Q8WXU2 420 aa24.54■■□□□ 1.52
NEK3-208ENST00000618534 TBX22Q9Y458 520 aa24.54■■□□□ 1.52
NEK3-208ENST00000618534 CEMIPQ8WUJ3 1361 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 PI4KAP2A4QPH2 592 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 LARGE1O95461 756 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 EIF4A1P60842 406 aaKnown RBP24.53■■□□□ 1.52
NEK3-208ENST00000618534 PI4KAP1Q8N8J0 262 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 FAM13BQ9NYF5 915 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.53■■□□□ 1.52
NEK3-208ENST00000618534 ABTB2Q8N961 1025 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 USP25Q9UHP3 1055 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 SMC3Q9UQE7 1217 aa24.53■■□□□ 1.52
NEK3-208ENST00000618534 F13A1P00488 732 aa24.52■■□□□ 1.52
NEK3-208ENST00000618534 CASTP20810 708 aaKnown RBP24.52■■□□□ 1.52
NEK3-208ENST00000618534 KIAA2012Q0VF49 1180 aa24.52■■□□□ 1.52
NEK3-208ENST00000618534 UVSSAQ2YD98 709 aa24.52■■□□□ 1.52
NEK3-208ENST00000618534 MPNDQ8N594 471 aa24.52■■□□□ 1.52
NEK3-208ENST00000618534 USP42Q9H9J4 1324 aaKnown RBP24.51■■□□□ 1.51
NEK3-208ENST00000618534 FIBPO43427 364 aa24.51■■□□□ 1.51
NEK3-208ENST00000618534 ANXA1P04083 346 aa24.51■■□□□ 1.51
NEK3-208ENST00000618534 UBE2HP62256 183 aa24.51■■□□□ 1.51
NEK3-208ENST00000618534 OS9Q13438 667 aaPredicted RBP24.51■■□□□ 1.51
NEK3-208ENST00000618534 SASS6Q6UVJ0 657 aa24.51■■□□□ 1.51
NEK3-208ENST00000618534 LGR6Q9HBX8 967 aa24.51■■□□□ 1.51
NEK3-208ENST00000618534 MED1Q15648 1581 aaPredicted RBP24.5■■□□□ 1.51
NEK3-208ENST00000618534 USP54Q70EL1 1684 aa24.5■■□□□ 1.51
NEK3-208ENST00000618534 KCNQ3O43525 872 aa24.5■■□□□ 1.51
NEK3-208ENST00000618534 DTNBO60941 627 aa24.5■■□□□ 1.51
NEK3-208ENST00000618534 HCLS1P14317 486 aaPredicted RBP24.5■■□□□ 1.51
NEK3-208ENST00000618534 HSP90AB4PQ58FF6 505 aa24.5■■□□□ 1.51
NEK3-208ENST00000618534 DIAPH3Q9NSV4 1193 aa24.5■■□□□ 1.51
NEK3-208ENST00000618534 GLRX3O76003 335 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms