RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 UHRF1BP1Q6BDS2 1440 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 EVI5LQ96CN4 794 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 PUS7Q96PZ0 661 aaKnown RBP11.93□□□□□ -0.5
CUL4A-212ENST00000617546 NAA15Q9BXJ9 866 aaKnown RBP11.93□□□□□ -0.5
CUL4A-212ENST00000617546 CCDC69A6NI79 296 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 SKILP12757 684 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 SPA17Q15506 151 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 NACAP1Q9BZK3 213 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 RASSF4Q9H2L5 321 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
CUL4A-212ENST00000617546 USO1O60763 962 aaKnown RBP11.92□□□□□ -0.5
CUL4A-212ENST00000617546 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
CUL4A-212ENST00000617546 MAGI1Q96QZ7 1491 aaPredicted RBP11.92□□□□□ -0.5
CUL4A-212ENST00000617546 YEATS4O95619 227 aa11.92□□□□□ -0.5
CUL4A-212ENST00000617546 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
CUL4A-212ENST00000617546 CCAR1Q8IX12 1150 aaKnown RBP11.92□□□□□ -0.5
CUL4A-212ENST00000617546 CDK19Q9BWU1 502 aa11.92□□□□□ -0.5
CUL4A-212ENST00000617546 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 A6NNZ2 444 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 PAFAH1B1P43034 410 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 TUBB8Q3ZCM7 444 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 ATL3Q6DD88 541 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 CCDC186Q7Z3E2 898 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 F13A1P00488 732 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 CDK5RAP3Q96JB5 506 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 ITSN2Q9NZM3 1697 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 RTEL1-TNFRSF6BF6WH68 1400 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 FSIP1Q8NA03 581 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
CUL4A-212ENST00000617546 TRMT1Q9NXH9 659 aaKnown RBP11.91□□□□□ -0.5
CUL4A-212ENST00000617546 TTC31Q49AM3 519 aaPredicted RBP11.91□□□□□ -0.5
CUL4A-212ENST00000617546 PRAG1Q86YV5 1406 aa11.9□□□□□ -0.5
CUL4A-212ENST00000617546 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
CUL4A-212ENST00000617546 PRAM1Q96QH2 718 aa11.9□□□□□ -0.5
CUL4A-212ENST00000617546 LRRFIP2Q9Y608 721 aaKnown RBP11.9□□□□□ -0.5
CUL4A-212ENST00000617546 GIGYF2Q6Y7W6 1299 aaKnown RBP11.9□□□□□ -0.5
CUL4A-212ENST00000617546 CCDC91Q7Z6B0 441 aa11.9□□□□□ -0.5
CUL4A-212ENST00000617546 FGFR1OPO95684 399 aaKnown RBP11.9□□□□□ -0.5
CUL4A-212ENST00000617546 PIP4K2BP78356 416 aa11.9□□□□□ -0.5
CUL4A-212ENST00000617546 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.5
CUL4A-212ENST00000617546 CENPHQ9H3R5 247 aa11.9□□□□□ -0.5
CUL4A-212ENST00000617546 IBTKQ9P2D0 1353 aaPredicted RBP11.9□□□□□ -0.5
CUL4A-212ENST00000617546 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 FSD2A1L4K1 749 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 OPA1O60313 960 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 EIF5P55010 431 aaKnown RBP11.89□□□□□ -0.51
CUL4A-212ENST00000617546 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 EXOC6BQ9Y2D4 811 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
CUL4A-212ENST00000617546 SDSP20132 328 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 ANO6Q4KMQ2 910 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 FERMT3Q86UX7 667 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 CCDC196A0A1B0GTZ2 297 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 GIMAP6Q6P9H5 292 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 NBPF11Q86T75 865 aa11.89□□□□□ -0.51
CUL4A-212ENST00000617546 NPHP3Q7Z494 1330 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 FKBP15Q5T1M5 1219 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 ALS2CR12Q96Q35 445 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 NF2P35240 595 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 MNAT1P51948 309 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 TYRO3Q06418 890 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 KCNG4Q8TDN1 519 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.88□□□□□ -0.514e-7■□□□□ 11.3
CUL4A-212ENST00000617546 GNG11P61952 73 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 RBSNQ9H1K0 784 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 CABP1Q9NZU7 370 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 CTAGE15A4D2H0 777 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 CTAGE8P0CG41 777 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 SYCP1Q15431 976 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 CTAGE6Q86UF2 777 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 CTAGE4Q8IX94 777 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 IL1RAPL2Q9NP60 686 aa11.88□□□□□ -0.51
CUL4A-212ENST00000617546 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
CUL4A-212ENST00000617546 MAP4K4O95819 1239 aaPredicted RBP11.87□□□□□ -0.51
CUL4A-212ENST00000617546 VPS37DQ86XT2 251 aa11.87□□□□□ -0.51
CUL4A-212ENST00000617546 PTPRKQ15262 1439 aa11.87□□□□□ -0.51
CUL4A-212ENST00000617546 GCOM1H8Y6P7 765 aaPredicted RBP11.87□□□□□ -0.51
CUL4A-212ENST00000617546 MYZAPP0CAP1 466 aa11.87□□□□□ -0.51
CUL4A-212ENST00000617546 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
CUL4A-212ENST00000617546 TTC12Q9H892 705 aaPredicted RBP11.87□□□□□ -0.51
CUL4A-212ENST00000617546 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
CUL4A-212ENST00000617546 COL17A1Q9UMD9 1497 aaPredicted RBP11.87□□□□□ -0.51
CUL4A-212ENST00000617546 GOLIM4O00461 696 aa11.87□□□□□ -0.51
CUL4A-212ENST00000617546 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
CUL4A-212ENST00000617546 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
CUL4A-212ENST00000617546 CNNM3Q8NE01 707 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 DYDC1Q8WWB3 177 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 ZBTB40Q9NUA8 1239 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 HSF2BPO75031 334 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 SPAG1Q07617 926 aa11.86□□□□□ -0.51
CUL4A-212ENST00000617546 AIMP1Q12904 312 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms