RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 TTC5Q8N0Z6 440 aa29.75■■■□□ 2.35
NEDD4L-237ENST00000617539 ADCY9O60503 1353 aa29.74■■■□□ 2.35
NEDD4L-237ENST00000617539 HEG1Q9ULI3 1381 aa29.74■■■□□ 2.35
NEDD4L-237ENST00000617539 AFDNP55196 1824 aaKnown RBP29.73■■■□□ 2.35
NEDD4L-237ENST00000617539 FCHSD2O94868 740 aa29.72■■■□□ 2.35
NEDD4L-237ENST00000617539 TM4SF1P30408 202 aa29.72■■■□□ 2.35
NEDD4L-237ENST00000617539 POLRMTO00411 1230 aaKnown RBP29.71■■■□□ 2.35
NEDD4L-237ENST00000617539 DPEP1P16444 411 aa29.71■■■□□ 2.35
NEDD4L-237ENST00000617539 NARFQ9UHQ1 456 aa29.71■■■□□ 2.35
NEDD4L-237ENST00000617539 NRXN2Q9P2S2 1712 aa29.71■■■□□ 2.35
NEDD4L-237ENST00000617539 ATP10DQ9P241 1426 aa29.71■■■□□ 2.35
NEDD4L-237ENST00000617539 KCNQ3O43525 872 aa29.7■■■□□ 2.35
NEDD4L-237ENST00000617539 ZPR1O75312 459 aa29.7■■■□□ 2.35
NEDD4L-237ENST00000617539 BCL2L12Q9HB09 334 aa29.7■■■□□ 2.35
NEDD4L-237ENST00000617539 KCNA3P22001 575 aa29.69■■■□□ 2.34
NEDD4L-237ENST00000617539 CANXP27824 592 aaKnown RBP29.69■■■□□ 2.34
NEDD4L-237ENST00000617539 DLG5Q8TDM6 1919 aa29.69■■■□□ 2.34
NEDD4L-237ENST00000617539 SCN7AQ01118 1682 aa29.68■■■□□ 2.34
NEDD4L-237ENST00000617539 ARFGEF1Q9Y6D6 1849 aa29.68■■■□□ 2.34
NEDD4L-237ENST00000617539 STARD3NLO95772 234 aa29.67■■■□□ 2.34
NEDD4L-237ENST00000617539 EIF5P55010 431 aaKnown RBP29.67■■■□□ 2.34
NEDD4L-237ENST00000617539 MCM10Q7L590 875 aa29.67■■■□□ 2.34
NEDD4L-237ENST00000617539 BCS1LQ9Y276 419 aa29.66■■■□□ 2.34
NEDD4L-237ENST00000617539 BTBD11A6QL63 1104 aa29.65■■■□□ 2.34
NEDD4L-237ENST00000617539 NFIXQ14938 502 aa29.65■■■□□ 2.34
NEDD4L-237ENST00000617539 FMNL2Q96PY5 1086 aa29.65■■■□□ 2.34
NEDD4L-237ENST00000617539 DCTN1Q14203 1278 aa29.64■■■□□ 2.34
NEDD4L-237ENST00000617539 C1QTNF8P60827 252 aa29.63■■■□□ 2.33
NEDD4L-237ENST00000617539 TEX13AQ9BXU3 409 aaPredicted RBP29.63■■■□□ 2.33
NEDD4L-237ENST00000617539 GIGYF1O75420 1035 aaPredicted RBP29.61■■■□□ 2.33
NEDD4L-237ENST00000617539 DLEC1Q9Y238 1755 aa29.6■■■□□ 2.33
NEDD4L-237ENST00000617539 CHRNA5P30532 468 aa29.6■■■□□ 2.33
NEDD4L-237ENST00000617539 RTF1Q92541 710 aaKnown RBP29.6■■■□□ 2.33
NEDD4L-237ENST00000617539 BCORQ6W2J9 1755 aa29.59■■■□□ 2.33
NEDD4L-237ENST00000617539 A1BGP04217 495 aa29.59■■■□□ 2.33
NEDD4L-237ENST00000617539 PLEKHF1Q96S99 279 aa29.59■■■□□ 2.33
NEDD4L-237ENST00000617539 PRAMEF22A3QJZ6 481 aa29.58■■■□□ 2.33
NEDD4L-237ENST00000617539 HTATSF1O43719 755 aaKnown RBP29.58■■■□□ 2.33
NEDD4L-237ENST00000617539 IL6STP40189 918 aaPredicted RBP29.57■■■□□ 2.32
NEDD4L-237ENST00000617539 PIM2Q9P1W9 311 aa29.57■■■□□ 2.32
NEDD4L-237ENST00000617539 USP16Q9Y5T5 823 aa29.57■■■□□ 2.32
NEDD4L-237ENST00000617539 CARMIL3Q8ND23 1372 aa29.56■■■□□ 2.32
NEDD4L-237ENST00000617539 A0A087WZG4 1122 aa29.56■■■□□ 2.32
NEDD4L-237ENST00000617539 ANKRD31Q8N7Z5 1873 aa29.56■■■□□ 2.32
NEDD4L-237ENST00000617539 KDM3BQ7LBC6 1761 aa29.56■■■□□ 2.32
NEDD4L-237ENST00000617539 SERPINB2P05120 415 aa29.55■■■□□ 2.32
NEDD4L-237ENST00000617539 TBC1D2BQ9UPU7 963 aa29.55■■■□□ 2.32
NEDD4L-237ENST00000617539 ZNF330Q9Y3S2 320 aaPredicted RBP29.55■■■□□ 2.32
NEDD4L-237ENST00000617539 TBC1D9BQ66K14 1250 aa29.54■■■□□ 2.32
NEDD4L-237ENST00000617539 ARHGAP27Q6ZUM4 889 aa29.54■■■□□ 2.32
NEDD4L-237ENST00000617539 ZNF526Q8TF50 670 aaPredicted RBP29.54■■■□□ 2.32
NEDD4L-237ENST00000617539 BICDL1Q6ZP65 573 aa29.53■■■□□ 2.32
NEDD4L-237ENST00000617539 GPBP1L1Q9HC44 474 aaPredicted RBP29.53■■■□□ 2.32
NEDD4L-237ENST00000617539 LAMB4A4D0S4 1761 aa29.53■■■□□ 2.32
NEDD4L-237ENST00000617539 PIP4K2AP48426 406 aaPredicted RBP29.52■■■□□ 2.32
NEDD4L-237ENST00000617539 DALRD3Q5D0E6 543 aaKnown RBP29.52■■■□□ 2.32
NEDD4L-237ENST00000617539 CAMTA2O94983 1202 aa29.5■■■□□ 2.31
NEDD4L-237ENST00000617539 SNRPA1P09661 255 aaKnown RBP29.5■■■□□ 2.31
NEDD4L-237ENST00000617539 DDX10Q13206 875 aaKnown RBP29.5■■■□□ 2.31
NEDD4L-237ENST00000617539 TAF7Q15545 349 aaPredicted RBP29.5■■■□□ 2.31
NEDD4L-237ENST00000617539 MIS18AQ9NYP9 233 aa29.5■■■□□ 2.31
NEDD4L-237ENST00000617539 COL11A2P13942 1736 aaPredicted RBP29.49■■■□□ 2.31
NEDD4L-237ENST00000617539 RALBP1Q15311 655 aa29.49■■■□□ 2.31
NEDD4L-237ENST00000617539 SBF1O95248 1867 aa29.48■■■□□ 2.31
NEDD4L-237ENST00000617539 NFE2L2Q16236 605 aa29.48■■■□□ 2.31
NEDD4L-237ENST00000617539 THUMPD2Q9BTF0 503 aaKnown RBP29.47■■■□□ 2.31
NEDD4L-237ENST00000617539 SENP3-EIF4A1A0A087X0R7 540 aa29.46■■■□□ 2.31
NEDD4L-237ENST00000617539 NBPF26B4DH59 902 aa29.46■■■□□ 2.31
NEDD4L-237ENST00000617539 NEFMP07197 916 aa29.46■■■□□ 2.31
NEDD4L-237ENST00000617539 NBPF10Q6P3W6 841 aaKnown RBP29.46■■■□□ 2.31
NEDD4L-237ENST00000617539 DZIP3Q86Y13 1208 aaKnown RBP29.46■■■□□ 2.31
NEDD4L-237ENST00000617539 NBPF15Q8N660 670 aa29.46■■■□□ 2.31
NEDD4L-237ENST00000617539 CEP350Q5VT06 3117 aa29.46■■■□□ 2.31
NEDD4L-237ENST00000617539 PRR5LQ6MZQ0 368 aa29.43■■■□□ 2.3
NEDD4L-237ENST00000617539 C9orf131Q5VYM1 1079 aa29.42■■■□□ 2.3
NEDD4L-237ENST00000617539 C2CD5Q86YS7 1000 aa29.42■■■□□ 2.3
NEDD4L-237ENST00000617539 CCDC24Q8N4L8 307 aa29.42■■■□□ 2.3
NEDD4L-237ENST00000617539 MAPK8IP3Q9UPT6 1336 aa29.42■■■□□ 2.3
NEDD4L-237ENST00000617539 NPM2Q86SE8 214 aaKnown RBP29.41■■■□□ 2.3
NEDD4L-237ENST00000617539 KIF3CO14782 793 aa29.4■■■□□ 2.3
NEDD4L-237ENST00000617539 PNISRQ8TF01 805 aaKnown RBP29.39■■■□□ 2.3
NEDD4L-237ENST00000617539 PNNQ9H307 717 aaKnown RBP29.39■■■□□ 2.3
NEDD4L-237ENST00000617539 MYBBP1AQ9BQG0 1328 aaKnown RBP29.39■■■□□ 2.3
NEDD4L-237ENST00000617539 SETDB2Q96T68 719 aa29.38■■■□□ 2.29
NEDD4L-237ENST00000617539 BRIP1Q9BX63 1249 aa29.38■■■□□ 2.29
NEDD4L-237ENST00000617539 H0YIN7 160 aa29.37■■■□□ 2.29
NEDD4L-237ENST00000617539 EIF4A1P60842 406 aaKnown RBP29.37■■■□□ 2.29
NEDD4L-237ENST00000617539 TTLL6Q8N841 843 aa29.37■■■□□ 2.29
NEDD4L-237ENST00000617539 CACNA1SQ13698 1873 aa29.36■■■□□ 2.29
NEDD4L-237ENST00000617539 RASSF7Q02833 373 aa29.36■■■□□ 2.29
NEDD4L-237ENST00000617539 CLEC4GQ6UXB4 293 aa29.35■■■□□ 2.29
NEDD4L-237ENST00000617539 CNBD1Q8NA66 436 aa29.35■■■□□ 2.29
NEDD4L-237ENST00000617539 RNF181Q9P0P0 153 aa29.35■■■□□ 2.29
NEDD4L-237ENST00000617539 CCDC88AQ3V6T2 1871 aa29.35■■■□□ 2.29
NEDD4L-237ENST00000617539 PRELPP51888 382 aa29.34■■■□□ 2.29
NEDD4L-237ENST00000617539 ARFGEF2Q9Y6D5 1785 aa29.34■■■□□ 2.29
NEDD4L-237ENST00000617539 PDE6BP35913 854 aa29.33■■■□□ 2.29
NEDD4L-237ENST00000617539 RIPK4P57078 832 aa29.32■■■□□ 2.28
NEDD4L-237ENST00000617539 NMRK2Q9NPI5 230 aa29.32■■■□□ 2.28
NEDD4L-237ENST00000617539 FER1L6Q2WGJ9 1857 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms