RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 MYD88Q99836 296 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 NSD2O96028 1365 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 TCOF1Q13428 1488 aaKnown RBP18.12■□□□□ 0.49
PTPRT-210ENST00000617474 ZSCAN22P10073 491 aaPredicted RBP18.11■□□□□ 0.49
PTPRT-210ENST00000617474 SMARCE1Q969G3 411 aa18.11■□□□□ 0.49
PTPRT-210ENST00000617474 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
PTPRT-210ENST00000617474 DNM1Q05193 864 aaKnown RBP18.11■□□□□ 0.49
PTPRT-210ENST00000617474 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
PTPRT-210ENST00000617474 DCTPP1Q9H773 170 aa18.11■□□□□ 0.49
PTPRT-210ENST00000617474 ANO10Q9NW15 660 aa18.11■□□□□ 0.49
PTPRT-210ENST00000617474 ATP10BO94823 1461 aa18.11■□□□□ 0.49
PTPRT-210ENST00000617474 CWC15Q9P013 229 aaKnown RBP18.11■□□□□ 0.49
PTPRT-210ENST00000617474 PIK3C2GO75747 1445 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 LEKR1Q6ZMV7 388 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 FSIP1Q8NA03 581 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 H0YHG0 523 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 ANKRD36BQ8N2N9 1353 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 IGSF3O75054 1194 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
PTPRT-210ENST00000617474 KLHL10Q6JEL2 608 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 CCDC186Q7Z3E2 898 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.1■□□□□ 0.49
PTPRT-210ENST00000617474 RBSNQ9H1K0 784 aa18.1■□□□□ 0.49
PTPRT-210ENST00000617474 CCDC69A6NI79 296 aa18.09■□□□□ 0.49
PTPRT-210ENST00000617474 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
PTPRT-210ENST00000617474 PROSER2Q86WR7 435 aaPredicted RBP18.09■□□□□ 0.49
PTPRT-210ENST00000617474 POLR3GO15318 223 aaPredicted RBP18.09■□□□□ 0.49
PTPRT-210ENST00000617474 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.49
PTPRT-210ENST00000617474 CEP85Q6P2H3 762 aa18.08■□□□□ 0.49
PTPRT-210ENST00000617474 C8orf76Q96K31 380 aa18.08■□□□□ 0.49
PTPRT-210ENST00000617474 DDX19AQ9NUU7 478 aaKnown RBP18.08■□□□□ 0.49
PTPRT-210ENST00000617474 TMCO3Q6UWJ1 677 aa18.08■□□□□ 0.48
PTPRT-210ENST00000617474 CTNNA3Q9UI47 895 aa18.08■□□□□ 0.48
PTPRT-210ENST00000617474 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
PTPRT-210ENST00000617474 CPA1P15085 419 aa18.08■□□□□ 0.48
PTPRT-210ENST00000617474 USP26Q9BXU7 913 aa18.08■□□□□ 0.48
PTPRT-210ENST00000617474 CBFA2T2O43439 604 aa18.07■□□□□ 0.48
PTPRT-210ENST00000617474 POLR3DP05423 398 aaPredicted RBP18.07■□□□□ 0.48
PTPRT-210ENST00000617474 FAM193AP78312 1265 aa18.07■□□□□ 0.48
PTPRT-210ENST00000617474 KIF6Q6ZMV9 814 aa18.07■□□□□ 0.48
PTPRT-210ENST00000617474 SNRKQ9NRH2 765 aa18.07■□□□□ 0.48
PTPRT-210ENST00000617474 DACT1Q9NYF0 836 aa18.07■□□□□ 0.48
PTPRT-210ENST00000617474 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRT-210ENST00000617474 V9GYY5 206 aaPredicted RBP18.07■□□□□ 0.48
PTPRT-210ENST00000617474 ERCC4Q92889 916 aaPredicted RBP18.07■□□□□ 0.48
PTPRT-210ENST00000617474 MAP3K2Q9Y2U5 619 aa18.07■□□□□ 0.48
PTPRT-210ENST00000617474 FOXO3O43524 673 aa18.07■□□□□ 0.48
PTPRT-210ENST00000617474 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
PTPRT-210ENST00000617474 SMTNL1A8MU46 457 aa18.06■□□□□ 0.48
PTPRT-210ENST00000617474 HAND2P61296 217 aa18.06■□□□□ 0.48
PTPRT-210ENST00000617474 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
PTPRT-210ENST00000617474 COL17A1Q9UMD9 1497 aaPredicted RBP18.06■□□□□ 0.48
PTPRT-210ENST00000617474 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
PTPRT-210ENST00000617474 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
PTPRT-210ENST00000617474 IFIT1P09914 478 aaKnown RBP18.06■□□□□ 0.48
PTPRT-210ENST00000617474 RBM25P49756 843 aaKnown RBP18.06■□□□□ 0.48
PTPRT-210ENST00000617474 CCDC102AQ96A19 550 aa18.06■□□□□ 0.48
PTPRT-210ENST00000617474 EVI5LQ96CN4 794 aa18.06■□□□□ 0.48
PTPRT-210ENST00000617474 PDIA4P13667 645 aaKnown RBP18.06■□□□□ 0.48
PTPRT-210ENST00000617474 TMC6Q7Z403 805 aa18.06■□□□□ 0.48
PTPRT-210ENST00000617474 BRF1Q92994 677 aa18.06■□□□□ 0.48
PTPRT-210ENST00000617474 MAGEC2Q9UBF1 373 aaPredicted RBP18.06■□□□□ 0.48
PTPRT-210ENST00000617474 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 TXLNAP40222 546 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 TDO2P48775 406 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 ARHGAP29Q52LW3 1261 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 TOM1L2Q6ZVM7 507 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 ANO6Q4KMQ2 910 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 THEMISQ8N1K5 641 aaPredicted RBP18.05■□□□□ 0.48
PTPRT-210ENST00000617474 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 TRIM34Q9BYJ4 488 aa18.05■□□□□ 0.48
PTPRT-210ENST00000617474 UVSSAQ2YD98 709 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 GOLIM4O00461 696 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 PRIMPOLQ96LW4 560 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 EPS15P42566 896 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 ACEP12821 1306 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 A0A087WZG4 1122 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 HSP90AA4PQ58FG1 418 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 DDX46Q7L014 1031 aaKnown RBP18.04■□□□□ 0.48
PTPRT-210ENST00000617474 NACAP1Q9BZK3 213 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
PTPRT-210ENST00000617474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTPRT-210ENST00000617474 NUP160Q12769 1436 aa18.04■□□□□ 0.48
PTPRT-210ENST00000617474 CD109Q6YHK3 1445 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
PTPRT-210ENST00000617474 TSPYL1Q9H0U9 437 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 DNAJC25Q9H1X3 360 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 RBM8AQ9Y5S9 174 aaKnown RBP18.03■□□□□ 0.48
PTPRT-210ENST00000617474 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 TOP1P11387 765 aaKnown RBP18.03■□□□□ 0.48
PTPRT-210ENST00000617474 ZBTB9Q96C00 473 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 ZNHIT6Q9NWK9 470 aaKnown RBP18.03■□□□□ 0.48
PTPRT-210ENST00000617474 DACH1Q9UI36 760 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 CDKL5O76039 1030 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 AK2P54819 239 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 MPHOSPH8Q99549 860 aa18.03■□□□□ 0.48
PTPRT-210ENST00000617474 ZSWIM4Q9H7M6 989 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms