RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CARD10Q9BWT7 1032 aa9.77□□□□□ -0.85
NEK3-207ENST00000617054 A0A0G2JS52 829 aa9.76□□□□□ -0.85
NEK3-207ENST00000617054 TTC5Q8N0Z6 440 aa9.76□□□□□ -0.85
NEK3-207ENST00000617054 USP44Q9H0E7 712 aa9.76□□□□□ -0.85
NEK3-207ENST00000617054 PNMA6EA0A0J9YXQ4 647 aa9.76□□□□□ -0.85
NEK3-207ENST00000617054 NBPF7P0C2Y1 421 aaPredicted RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 ANP32AP39687 249 aaKnown RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
NEK3-207ENST00000617054 CCT4P50991 539 aaKnown RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 CWF19L2Q2TBE0 894 aaKnown RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 OTUD7AQ8TE49 926 aaPredicted RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.76□□□□□ -0.854e-7■■■■□ 22.1
NEK3-207ENST00000617054 LRRFIP2Q9Y608 721 aaKnown RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 JARID2Q92833 1246 aaPredicted RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 DBF4Q9UBU7 674 aaPredicted RBP9.76□□□□□ -0.85
NEK3-207ENST00000617054 MAP3K2Q9Y2U5 619 aa9.76□□□□□ -0.85
NEK3-207ENST00000617054 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
NEK3-207ENST00000617054 PDIA6Q15084 440 aa9.75□□□□□ -0.85
NEK3-207ENST00000617054 EXOC6BQ9Y2D4 811 aa9.75□□□□□ -0.85
NEK3-207ENST00000617054 LTBP4Q8N2S1 1624 aa9.75□□□□□ -0.85
NEK3-207ENST00000617054 EP400Q96L91 3159 aa9.75□□□□□ -0.85
NEK3-207ENST00000617054 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
NEK3-207ENST00000617054 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
NEK3-207ENST00000617054 NHSL1Q5SYE7 1610 aa9.75□□□□□ -0.85
NEK3-207ENST00000617054 DNAAF4Q8WXU2 420 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
NEK3-207ENST00000617054 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
NEK3-207ENST00000617054 KDM3BQ7LBC6 1761 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 OVOS2A0A0G2JMS6 1433 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 CCDC9Q9Y3X0 531 aaKnown RBP9.74□□□□□ -0.85
NEK3-207ENST00000617054 PCDH11XQ9BZA7 1347 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 PCDH11YQ9BZA8 1340 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 GNAI2P04899 355 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 COPS6Q7L5N1 327 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
NEK3-207ENST00000617054 BEND3Q5T5X7 828 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 GCC1Q96CN9 775 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 DCTPP1Q9H773 170 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
NEK3-207ENST00000617054 ADCY9O60503 1353 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 HEG1Q9ULI3 1381 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 ABCA3Q99758 1704 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 XAGE3Q8WTP9 111 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 A1BGP04217 495 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 HOXB7P09629 217 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 UBTFL1P0CB47 393 aaPredicted RBP9.73□□□□□ -0.85
NEK3-207ENST00000617054 RPAP2Q8IXW5 612 aaPredicted RBP9.73□□□□□ -0.85
NEK3-207ENST00000617054 ASAP1Q9ULH1 1129 aa9.73□□□□□ -0.85
NEK3-207ENST00000617054 TOM1O60784 492 aa9.72□□□□□ -0.85
NEK3-207ENST00000617054 IPO9Q96P70 1041 aaKnown RBP9.72□□□□□ -0.85
NEK3-207ENST00000617054 FMNL2Q96PY5 1086 aa9.72□□□□□ -0.85
NEK3-207ENST00000617054 SCN11AQ9UI33 1791 aa9.72□□□□□ -0.85
NEK3-207ENST00000617054 HSP90AB1P08238 724 aaKnown RBP9.72□□□□□ -0.85
NEK3-207ENST00000617054 SNRPA1P09661 255 aaKnown RBP9.72□□□□□ -0.85
NEK3-207ENST00000617054 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
NEK3-207ENST00000617054 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
NEK3-207ENST00000617054 DDX21Q9NR30 783 aaKnown RBP eCLIP9.71□□□□□ -0.85
NEK3-207ENST00000617054 ATP5J2-PTCD1G3V325 749 aa9.71□□□□□ -0.86
NEK3-207ENST00000617054 KSR2Q6VAB6 950 aa9.71□□□□□ -0.86
NEK3-207ENST00000617054 GNAI3P08754 354 aa9.71□□□□□ -0.86
NEK3-207ENST00000617054 MFAP1P55081 439 aaKnown RBP9.71□□□□□ -0.86
NEK3-207ENST00000617054 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
NEK3-207ENST00000617054 PPP1R42Q7Z4L9 355 aa9.71□□□□□ -0.86
NEK3-207ENST00000617054 PIGBQ92521 554 aa9.71□□□□□ -0.86
NEK3-207ENST00000617054 HYPKQ9NX55 129 aa9.71□□□□□ -0.86
NEK3-207ENST00000617054 C9orf78Q9NZ63 289 aaPredicted RBP9.71□□□□□ -0.86
NEK3-207ENST00000617054 ZNF219Q9P2Y4 722 aaPredicted RBP9.71□□□□□ -0.86
NEK3-207ENST00000617054 SIPA1L3O60292 1781 aaPredicted RBP9.7□□□□□ -0.86
NEK3-207ENST00000617054 SOS1Q07889 1333 aaPredicted RBP9.7□□□□□ -0.86
NEK3-207ENST00000617054 ACSBG1Q96GR2 724 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 C8orf37Q96NL8 207 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
NEK3-207ENST00000617054 GOLGB1Q14789 3259 aaKnown RBP9.7□□□□□ -0.86
NEK3-207ENST00000617054 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
NEK3-207ENST00000617054 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 MYD88Q99836 296 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 IL1RAPL2Q9NP60 686 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 TMOD3Q9NYL9 352 aa9.7□□□□□ -0.86
NEK3-207ENST00000617054 EXOC5O00471 708 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 SRGAP3O43295 1099 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 IGKV5-2P06315 115 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 ZBTB47Q9UFB7 747 aaPredicted RBP9.69□□□□□ -0.86
NEK3-207ENST00000617054 C5P01031 1676 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 ATP8B2P98198 1209 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 TTLL7Q6ZT98 887 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 ERVV-2B6SEH9 535 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
NEK3-207ENST00000617054 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
NEK3-207ENST00000617054 PKD1L3Q7Z443 1732 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
NEK3-207ENST00000617054 LRP10Q7Z4F1 713 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 PA2G4Q9UQ80 394 aaKnown RBP9.68□□□□□ -0.86
NEK3-207ENST00000617054 PHLPP1O60346 1717 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 CACNA1FO60840 1977 aa9.68□□□□□ -0.86
NEK3-207ENST00000617054 HMMRO75330 724 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms