RNA–Protein interactions for RNA: ENST00000616868.1

SULF1-223, Transcript of sulfatase 1, human

TSL 5 BASIC

Gene SULF1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SULF1-223	ENST00000616868	U2AF2	P26368	475 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
SULF1-223	ENST00000616868	NUCB1	Q02818	461 aa		13.93	□□□□□ -0.18
SULF1-223	ENST00000616868	CHRNA2	Q15822	529 aa		13.93	□□□□□ -0.18
SULF1-223	ENST00000616868	RTF1	Q92541	710 aa	Known RBP	13.93	□□□□□ -0.18
SULF1-223	ENST00000616868	KDR	P35968	1356 aa		13.93	□□□□□ -0.18
SULF1-223	ENST00000616868	RGPD2	P0DJD1	1756 aa		13.93	□□□□□ -0.18
SULF1-223	ENST00000616868	CFAP44	Q96MT7	982 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	PLCB2	Q00722	1185 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	C8orf58	Q8NAV2	365 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	ANKRD24	Q8TF21	1146 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	KIF24	Q5T7B8	1368 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	RTL1	A6NKG5	1358 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	LRSAM1	Q6UWE0	723 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	TMEM51	Q9NW97	253 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	DDX19B	Q9UMR2	479 aa		13.92	□□□□□ -0.18
SULF1-223	ENST00000616868	ZNF853	P0CG23	659 aa		13.91	□□□□□ -0.18
SULF1-223	ENST00000616868	MED1	Q15648	1581 aa	Predicted RBP	13.9	□□□□□ -0.18
SULF1-223	ENST00000616868	ATF7IP	Q6VMQ6	1270 aa		13.9	□□□□□ -0.18
SULF1-223	ENST00000616868	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.9	□□□□□ -0.18
SULF1-223	ENST00000616868	GTPBP4	Q9BZE4	634 aa	Known RBP	13.9	□□□□□ -0.18
SULF1-223	ENST00000616868	BCL2L12	Q9HB09	334 aa		13.9	□□□□□ -0.18
SULF1-223	ENST00000616868	RGPD5	Q99666	1765 aa		13.9	□□□□□ -0.18
SULF1-223	ENST00000616868	ALS2	Q96Q42	1657 aa		13.9	□□□□□ -0.19
SULF1-223	ENST00000616868	TWISTNB	Q3B726	338 aa	Predicted RBP	13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	NOL8	Q76FK4	1167 aa	Known RBP	13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	SLIT3	O75094	1523 aa		13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	VAMP4	O75379	141 aa		13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	MCM5	P33992	734 aa		13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	SPATA31A3	Q5VYP0	1347 aa		13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	NUCB2	P80303	420 aa		13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	GDPD2	Q9HCC8	539 aa		13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	ZDHHC9	Q9Y397	364 aa		13.89	□□□□□ -0.19
SULF1-223	ENST00000616868	CT47B1	P0C2W7	299 aa	Predicted RBP	13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	BMP2KL	Q5H9B9	411 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	PDCL2	Q8N4E4	241 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	ZBTB40	Q9NUA8	1239 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	KIF3A	Q9Y496	699 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	TNS3	Q68CZ2	1445 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	USP25	Q9UHP3	1055 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	PXDN	Q92626	1479 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	GNAT3	A8MTJ3	354 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	CLEC17A	Q6ZS10	378 aa		13.88	□□□□□ -0.19
SULF1-223	ENST00000616868	LETM1	O95202	739 aa	Predicted RBP	13.87	□□□□□ -0.19
SULF1-223	ENST00000616868	KIF20A	O95235	890 aa		13.87	□□□□□ -0.19
SULF1-223	ENST00000616868	HAP1	P54257	671 aa	Predicted RBP	13.87	□□□□□ -0.19
SULF1-223	ENST00000616868	NLRP2	Q9NX02	1062 aa		13.87	□□□□□ -0.19
SULF1-223	ENST00000616868	CSB-PGBD3	P0DP91	1061 aa		13.87	□□□□□ -0.19
SULF1-223	ENST00000616868	TSPYL4	Q9UJ04	414 aa		13.87	□□□□□ -0.19
SULF1-223	ENST00000616868	APBB1	O00213	710 aa		13.86	□□□□□ -0.19
SULF1-223	ENST00000616868	CHL1	O00533	1208 aa		13.86	□□□□□ -0.19
SULF1-223	ENST00000616868	IL17RE	Q8NFR9	667 aa		13.86	□□□□□ -0.19
SULF1-223	ENST00000616868	TSPY26P	Q9H489	355 aa		13.86	□□□□□ -0.19
SULF1-223	ENST00000616868	KIAA0232	Q92628	1395 aa		13.85	□□□□□ -0.19
SULF1-223	ENST00000616868	PDIA4	P13667	645 aa	Known RBP	13.85	□□□□□ -0.19
SULF1-223	ENST00000616868	CRB1	P82279	1406 aa		13.85	□□□□□ -0.19
SULF1-223	ENST00000616868	CYP2E1	P05181	493 aa	Predicted RBP	13.85	□□□□□ -0.19
SULF1-223	ENST00000616868	LGR6	Q9HBX8	967 aa		13.85	□□□□□ -0.19
SULF1-223	ENST00000616868	ERBB3	P21860	1342 aa		13.84	□□□□□ -0.19
SULF1-223	ENST00000616868	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.84	□□□□□ -0.19
SULF1-223	ENST00000616868	MAP3K5	Q99683	1374 aa		13.84	□□□□□ -0.19
SULF1-223	ENST00000616868	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.84	□□□□□ -0.19
SULF1-223	ENST00000616868	MPRIP	Q6WCQ1	1025 aa		13.83	□□□□□ -0.19
SULF1-223	ENST00000616868	ALDH1L2	Q3SY69	923 aa		13.83	□□□□□ -0.2
SULF1-223	ENST00000616868	MRPL50	Q8N5N7	158 aa	Known RBP	13.83	□□□□□ -0.2
SULF1-223	ENST00000616868	NECTIN2	Q92692	538 aa		13.83	□□□□□ -0.2
SULF1-223	ENST00000616868	RIOK3	O14730	519 aa	Known RBP	13.83	□□□□□ -0.2
SULF1-223	ENST00000616868	CDC45	O75419	566 aa		13.83	□□□□□ -0.2
SULF1-223	ENST00000616868	PIBF1	Q8WXW3	757 aa		13.83	□□□□□ -0.2
SULF1-223	ENST00000616868	PRIMPOL	Q96LW4	560 aa		13.83	□□□□□ -0.2
SULF1-223	ENST00000616868	GADD45B	O75293	160 aa	Predicted RBP	13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	GSPT1	P15170	499 aa	Known RBP	13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	CDK11B	P21127	795 aa	Known RBP	13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	RABEP1	Q15276	862 aa		13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	PRDM11	Q9NQV5	511 aa		13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	SOS2	Q07890	1332 aa	Predicted RBP	13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	SMARCA5	O60264	1052 aa	Predicted RBP	13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	HMGN5	P82970	282 aa	Known RBP	13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	ADCY5	O95622	1261 aa		13.82	□□□□□ -0.2
SULF1-223	ENST00000616868	IPO8	O15397	1037 aa	Known RBP	13.81	□□□□□ -0.2
SULF1-223	ENST00000616868	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.81	□□□□□ -0.2
SULF1-223	ENST00000616868	SPC24	Q8NBT2	197 aa		13.81	□□□□□ -0.2
SULF1-223	ENST00000616868	KCNJ4	P48050	445 aa		13.81	□□□□□ -0.2
SULF1-223	ENST00000616868	NAA30	Q147X3	362 aa	Predicted RBP	13.8	□□□□□ -0.2
SULF1-223	ENST00000616868	TRERF1	Q96PN7	1200 aa		13.8	□□□□□ -0.2
SULF1-223	ENST00000616868	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.8	□□□□□ -0.2
SULF1-223	ENST00000616868	CHMP4A	Q9BY43	222 aa		13.8	□□□□□ -0.2
SULF1-223	ENST00000616868	C1orf141	Q5JVX7	400 aa		13.8	□□□□□ -0.2
SULF1-223	ENST00000616868	HTATSF1	O43719	755 aa	Known RBP	13.79	□□□□□ -0.2
SULF1-223	ENST00000616868	RAPGEF4	Q8WZA2	1011 aa		13.79	□□□□□ -0.2
SULF1-223	ENST00000616868	HCLS1	P14317	486 aa	Predicted RBP	13.79	□□□□□ -0.2
SULF1-223	ENST00000616868	TAF7	Q15545	349 aa	Predicted RBP	13.79	□□□□□ -0.2
SULF1-223	ENST00000616868	PYCARD	Q9ULZ3	195 aa		13.79	□□□□□ -0.2
SULF1-223	ENST00000616868	DTNB	O60941	627 aa		13.79	□□□□□ -0.2
SULF1-223	ENST00000616868	ZNF428	Q96B54	188 aa		13.79	□□□□□ -0.2
SULF1-223	ENST00000616868	SIRT2	Q8IXJ6	389 aa		13.78	□□□□□ -0.2
SULF1-223	ENST00000616868	USP26	Q9BXU7	913 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms