RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 SLC52A2Q9HAB3 445 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
LINC00598-207ENST00000616706 SIPA1L3O60292 1781 aaPredicted RBP12.91□□□□□ -0.34
LINC00598-207ENST00000616706 KDM6AO15550 1401 aaPredicted RBP12.91□□□□□ -0.34
LINC00598-207ENST00000616706 NWD2Q9ULI1 1742 aa12.91□□□□□ -0.34
LINC00598-207ENST00000616706 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
LINC00598-207ENST00000616706 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
LINC00598-207ENST00000616706 ANTXR1Q9H6X2 564 aa12.91□□□□□ -0.34
LINC00598-207ENST00000616706 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
LINC00598-207ENST00000616706 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
LINC00598-207ENST00000616706 F6X3S4 739 aa12.9□□□□□ -0.34
LINC00598-207ENST00000616706 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
LINC00598-207ENST00000616706 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
LINC00598-207ENST00000616706 RPAP2Q8IXW5 612 aaPredicted RBP12.9□□□□□ -0.34
LINC00598-207ENST00000616706 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
LINC00598-207ENST00000616706 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
LINC00598-207ENST00000616706 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
LINC00598-207ENST00000616706 PLEKHM2Q8IWE5 1019 aa12.89□□□□□ -0.35
LINC00598-207ENST00000616706 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
LINC00598-207ENST00000616706 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
LINC00598-207ENST00000616706 PXDNLA1KZ92 1463 aa12.89□□□□□ -0.35
LINC00598-207ENST00000616706 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
LINC00598-207ENST00000616706 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
LINC00598-207ENST00000616706 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
LINC00598-207ENST00000616706 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
LINC00598-207ENST00000616706 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
LINC00598-207ENST00000616706 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
LINC00598-207ENST00000616706 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
LINC00598-207ENST00000616706 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
LINC00598-207ENST00000616706 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
LINC00598-207ENST00000616706 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
LINC00598-207ENST00000616706 FLIIQ13045 1269 aa12.87□□□□□ -0.35
LINC00598-207ENST00000616706 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
LINC00598-207ENST00000616706 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
LINC00598-207ENST00000616706 C16orf71Q8IYS4 520 aaPredicted RBP12.87□□□□□ -0.35
LINC00598-207ENST00000616706 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
LINC00598-207ENST00000616706 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
LINC00598-207ENST00000616706 TTC5Q8N0Z6 440 aa12.86□□□□□ -0.35
LINC00598-207ENST00000616706 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
LINC00598-207ENST00000616706 SOS1Q07889 1333 aaPredicted RBP12.86□□□□□ -0.35
LINC00598-207ENST00000616706 AK9Q5TCS8 1911 aa12.86□□□□□ -0.35
LINC00598-207ENST00000616706 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 ACSBG1Q96GR2 724 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
LINC00598-207ENST00000616706 CDC45O75419 566 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 FKBP5Q13451 457 aaPredicted RBP12.85□□□□□ -0.35
LINC00598-207ENST00000616706 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 KIF2CQ99661 725 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 SCN11AQ9UI33 1791 aa12.85□□□□□ -0.35
LINC00598-207ENST00000616706 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
LINC00598-207ENST00000616706 PIGBQ92521 554 aa12.84□□□□□ -0.35
LINC00598-207ENST00000616706 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
LINC00598-207ENST00000616706 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
LINC00598-207ENST00000616706 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
LINC00598-207ENST00000616706 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
LINC00598-207ENST00000616706 SHANK3Q9BYB0 1731 aa12.83□□□□□ -0.35
LINC00598-207ENST00000616706 ATRNO75882 1429 aa12.83□□□□□ -0.36
LINC00598-207ENST00000616706 APBB1O00213 710 aa12.83□□□□□ -0.36
LINC00598-207ENST00000616706 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
LINC00598-207ENST00000616706 GSE1Q14687 1217 aa12.83□□□□□ -0.36
LINC00598-207ENST00000616706 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
LINC00598-207ENST00000616706 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
LINC00598-207ENST00000616706 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
LINC00598-207ENST00000616706 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
LINC00598-207ENST00000616706 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 HSCBQ8IWL3 235 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 C5P01031 1676 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 HMMRO75330 724 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 GNAI2P04899 355 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 SNX21Q969T3 373 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 FMNL2Q96PY5 1086 aa12.82□□□□□ -0.36
LINC00598-207ENST00000616706 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
LINC00598-207ENST00000616706 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
LINC00598-207ENST00000616706 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.81□□□□□ -0.36
LINC00598-207ENST00000616706 WNK3Q9BYP7 1800 aa12.8□□□□□ -0.36
LINC00598-207ENST00000616706 MRC1P22897 1456 aa12.8□□□□□ -0.36
LINC00598-207ENST00000616706 KCNQ2O43526 872 aa12.8□□□□□ -0.36
LINC00598-207ENST00000616706 HOXB7P09629 217 aa12.8□□□□□ -0.36
LINC00598-207ENST00000616706 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
LINC00598-207ENST00000616706 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
LINC00598-207ENST00000616706 GLI3P10071 1580 aa12.8□□□□□ -0.36
LINC00598-207ENST00000616706 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
LINC00598-207ENST00000616706 GNAI3P08754 354 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 SDSP20132 328 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
LINC00598-207ENST00000616706 EXOC6BQ9Y2D4 811 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 ANXA1P04083 346 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
LINC00598-207ENST00000616706 DDIT3P35638 169 aa12.78□□□□□ -0.36
LINC00598-207ENST00000616706 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
LINC00598-207ENST00000616706 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms