RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 STX6O43752 255 aa11.36□□□□□ -0.59
MCM3-207ENST00000616552 LIG1P18858 919 aa11.36□□□□□ -0.59
MCM3-207ENST00000616552 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
MCM3-207ENST00000616552 ZSCAN22P10073 491 aaPredicted RBP11.36□□□□□ -0.59
MCM3-207ENST00000616552 POGZQ7Z3K3 1410 aa11.36□□□□□ -0.59
MCM3-207ENST00000616552 LRRFIP2Q9Y608 721 aaKnown RBP11.36□□□□□ -0.59
MCM3-207ENST00000616552 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
MCM3-207ENST00000616552 USP27XA6NNY8 438 aa11.35□□□□□ -0.59
MCM3-207ENST00000616552 LRRCC1Q9C099 1032 aa11.35□□□□□ -0.59
MCM3-207ENST00000616552 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
MCM3-207ENST00000616552 FRMPD1Q5SYB0 1578 aa11.35□□□□□ -0.59
MCM3-207ENST00000616552 HSP90AB2PQ58FF8 381 aa11.35□□□□□ -0.59
MCM3-207ENST00000616552 ERCC4Q92889 916 aaPredicted RBP11.35□□□□□ -0.59
MCM3-207ENST00000616552 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
MCM3-207ENST00000616552 SNX14Q9Y5W7 946 aa11.35□□□□□ -0.59
MCM3-207ENST00000616552 PIK3C2BO00750 1634 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 PHF14O94880 888 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 CASTP20810 708 aaKnown RBP11.34□□□□□ -0.59
MCM3-207ENST00000616552 GJB2P29033 226 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 RICTORQ6R327 1708 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 F13A1P00488 732 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 MCCP23508 829 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 FOSBP53539 338 aa11.34□□□□□ -0.59
MCM3-207ENST00000616552 ARHGEF28Q8N1W1 1705 aaKnown RBP11.34□□□□□ -0.59
MCM3-207ENST00000616552 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.59
MCM3-207ENST00000616552 CCDC144CPQ8IYA2 1237 aa11.33□□□□□ -0.59
MCM3-207ENST00000616552 ANKRD7Q92527 254 aa11.33□□□□□ -0.59
MCM3-207ENST00000616552 TRMT1Q9NXH9 659 aaKnown RBP11.33□□□□□ -0.59
MCM3-207ENST00000616552 SRCAPQ6ZRS2 3230 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 KIF24Q5T7B8 1368 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 ABCC3O15438 1527 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 UBE2HP62256 183 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 TMEM51Q9NW97 253 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 SMC3Q9UQE7 1217 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 CEBPZQ03701 1054 aaKnown RBP11.33□□□□□ -0.6
MCM3-207ENST00000616552 ST3GAL1Q11201 340 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 CHAF1AQ13111 956 aaPredicted RBP11.33□□□□□ -0.6
MCM3-207ENST00000616552 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
MCM3-207ENST00000616552 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
MCM3-207ENST00000616552 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
MCM3-207ENST00000616552 TNNT1P13805 278 aa11.32□□□□□ -0.6
MCM3-207ENST00000616552 PTH1RQ03431 593 aa11.32□□□□□ -0.6
MCM3-207ENST00000616552 STK3Q13188 491 aa11.32□□□□□ -0.6
MCM3-207ENST00000616552 TTC6Q86TZ1 520 aa11.32□□□□□ -0.6
MCM3-207ENST00000616552 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
MCM3-207ENST00000616552 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
MCM3-207ENST00000616552 ANO6Q4KMQ2 910 aa11.32□□□□□ -0.6
MCM3-207ENST00000616552 SALL3Q9BXA9 1300 aa11.32□□□□□ -0.6
MCM3-207ENST00000616552 GNAI2P04899 355 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 EIF4A2Q14240 407 aaKnown RBP11.31□□□□□ -0.6
MCM3-207ENST00000616552 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 FAM184AQ8NB25 1140 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 TRIM5Q9C035 493 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 CHL1O00533 1208 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 HMMRO75330 724 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 HSPA4P34932 840 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
MCM3-207ENST00000616552 CACTINQ8WUQ7 758 aaKnown RBP11.31□□□□□ -0.6
MCM3-207ENST00000616552 TSPYL4Q9UJ04 414 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 MTMR6Q9Y217 621 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 MRVI1Q9Y6F6 885 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 SURF6O75683 361 aaKnown RBP11.31□□□□□ -0.6
MCM3-207ENST00000616552 ANXA1P04083 346 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 UVSSAQ2YD98 709 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 DNAJC25Q9H1X3 360 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
MCM3-207ENST00000616552 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
MCM3-207ENST00000616552 LETM1O95202 739 aaPredicted RBP11.3□□□□□ -0.6
MCM3-207ENST00000616552 KCNJ4P48050 445 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 CBX8Q9HC52 389 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 CTIFO43310 598 aaKnown RBP11.3□□□□□ -0.6
MCM3-207ENST00000616552 KIF20AO95235 890 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 MCM2P49736 904 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 TYRO3Q06418 890 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 ME3Q16798 604 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
MCM3-207ENST00000616552 TTC14Q96N46 770 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
MCM3-207ENST00000616552 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
MCM3-207ENST00000616552 COG3Q96JB2 828 aa11.29□□□□□ -0.6
MCM3-207ENST00000616552 SLFN14P0C7P3 912 aa11.29□□□□□ -0.6
MCM3-207ENST00000616552 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
MCM3-207ENST00000616552 ZNF215Q9UL58 517 aaPredicted RBP11.29□□□□□ -0.6
MCM3-207ENST00000616552 KMT5BQ4FZB7 885 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 ZSCAN25Q6NSZ9 544 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 FILIP1Q7Z7B0 1213 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 FTOQ9C0B1 505 aaKnown RBP eCLIP11.28□□□□□ -0.62e-8■■□□□ 12.1
MCM3-207ENST00000616552 HECW2Q9P2P5 1572 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 NR1I2O75469 434 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 CHGBP05060 677 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 MTHFSDQ2M296 383 aaKnown RBP11.28□□□□□ -0.6
MCM3-207ENST00000616552 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
MCM3-207ENST00000616552 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 LIMCH1Q9UPQ0 1083 aa11.28□□□□□ -0.6
MCM3-207ENST00000616552 SOS1Q07889 1333 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms