RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 IQCA1Q86XH1 822 aa14.59□□□□□ -0.07
TCF4-248ENST00000616053 DYNC1I1O14576 645 aa14.58□□□□□ -0.07
TCF4-248ENST00000616053 DDX46Q7L014 1031 aaKnown RBP14.58□□□□□ -0.07
TCF4-248ENST00000616053 CRACR2AQ9BSW2 395 aa14.58□□□□□ -0.07
TCF4-248ENST00000616053 ANKFY1Q9P2R3 1169 aa14.58□□□□□ -0.08
TCF4-248ENST00000616053 SMTNL1A8MU46 457 aa14.58□□□□□ -0.08
TCF4-248ENST00000616053 PNISRQ8TF01 805 aaKnown RBP14.58□□□□□ -0.08
TCF4-248ENST00000616053 RNF34Q969K3 372 aa14.58□□□□□ -0.08
TCF4-248ENST00000616053 TNMDQ9H2S6 317 aa14.58□□□□□ -0.08
TCF4-248ENST00000616053 TXNDC16Q9P2K2 825 aa14.58□□□□□ -0.08
TCF4-248ENST00000616053 CDC45O75419 566 aa14.58□□□□□ -0.08
TCF4-248ENST00000616053 NCAPGQ9BPX3 1015 aa14.58□□□□□ -0.08
TCF4-248ENST00000616053 RPUSD2Q8IZ73 545 aaKnown RBP14.57□□□□□ -0.08
TCF4-248ENST00000616053 NAP1L3Q99457 506 aaPredicted RBP14.57□□□□□ -0.08
TCF4-248ENST00000616053 SRCIN1Q9C0H9 1055 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 IRAK4Q9NWZ3 460 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 MPRIPQ6WCQ1 1025 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 A0A1W2PRG0 241 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 GNAI2P04899 355 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 NAPBQ9H115 298 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 CCDC194A0A1B0GVG4 234 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
TCF4-248ENST00000616053 KIF22Q14807 665 aa14.57□□□□□ -0.08
TCF4-248ENST00000616053 ZC3H6P61129 1189 aaKnown RBP14.56□□□□□ -0.08
TCF4-248ENST00000616053 ZBTB33Q86T24 672 aa14.56□□□□□ -0.08
TCF4-248ENST00000616053 CALML4Q96GE6 196 aa14.56□□□□□ -0.08
TCF4-248ENST00000616053 APAF1O14727 1248 aa14.56□□□□□ -0.08
TCF4-248ENST00000616053 CLGNO14967 610 aa14.56□□□□□ -0.08
TCF4-248ENST00000616053 BAG3O95817 575 aa14.56□□□□□ -0.08
TCF4-248ENST00000616053 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
TCF4-248ENST00000616053 TMCO3Q6UWJ1 677 aa14.56□□□□□ -0.08
TCF4-248ENST00000616053 AACSQ86V21 672 aa14.56□□□□□ -0.08
TCF4-248ENST00000616053 BTBD11A6QL63 1104 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 TBCAO75347 108 aaKnown RBP14.55□□□□□ -0.08
TCF4-248ENST00000616053 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 KLHL10Q6JEL2 608 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 AKAP2Q9Y2D5 859 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 PPP4R4Q6NUP7 873 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 CGNQ9P2M7 1197 aaKnown RBP14.55□□□□□ -0.08
TCF4-248ENST00000616053 CARMIL1Q5VZK9 1371 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 RRBP1Q9P2E9 1410 aaKnown RBP14.55□□□□□ -0.08
TCF4-248ENST00000616053 CCER2I3L3R5 266 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 SLC5A1P13866 664 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 GTF2F1P35269 517 aaKnown RBP eCLIP14.55□□□□□ -0.08
TCF4-248ENST00000616053 CCDC40Q4G0X9 1142 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 FBF1Q8TES7 1133 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 A0A087WZG4 1122 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 UBAP1LF5GYI3 381 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 NEK4P51957 841 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 DDX12PQ92771 950 aa14.55□□□□□ -0.08
TCF4-248ENST00000616053 RBM25P49756 843 aaKnown RBP14.55□□□□□ -0.08
TCF4-248ENST00000616053 CCDC12Q8WUD4 166 aaPredicted RBP14.55□□□□□ -0.08
TCF4-248ENST00000616053 NOL3O60936 208 aaKnown RBP14.54□□□□□ -0.08
TCF4-248ENST00000616053 GPR162Q16538 588 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 STK24Q9Y6E0 443 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 KIF15Q9NS87 1388 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 GOLGA1Q92805 767 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 GGNBP2Q9H3C7 697 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 FAM169AQ9Y6X4 670 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 IVNS1ABPQ9Y6Y0 642 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 CCDC196A0A1B0GTZ2 297 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 LDHCP07864 332 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 SLC4A8Q2Y0W8 1093 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 ITM2BQ9Y287 266 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 RASA3Q14644 834 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 TBC1D5Q92609 795 aa14.54□□□□□ -0.08
TCF4-248ENST00000616053 SETD5Q9C0A6 1442 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 SHTN1A0MZ66 631 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 HLTFQ14527 1009 aaKnown RBP eCLIP14.53□□□□□ -0.08
TCF4-248ENST00000616053 PPME1Q9Y570 386 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 HMGB1P1B2RPK0 211 aaPredicted RBP14.53□□□□□ -0.08
TCF4-248ENST00000616053 SLC8A3P57103 927 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 MCM10Q7L590 875 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 RUNDC1Q96C34 613 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 AFG3L2Q9Y4W6 797 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 WDR46O15213 610 aaKnown RBP14.53□□□□□ -0.08
TCF4-248ENST00000616053 AEBP1Q8IUX7 1158 aa14.53□□□□□ -0.08
TCF4-248ENST00000616053 CCDC160A6NGH7 325 aa14.52□□□□□ -0.08
TCF4-248ENST00000616053 PLVAPQ9BX97 442 aa14.52□□□□□ -0.08
TCF4-248ENST00000616053 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.08
TCF4-248ENST00000616053 FAM43AQ8N2R8 423 aa14.52□□□□□ -0.08
TCF4-248ENST00000616053 CEP112Q8N8E3 955 aa14.52□□□□□ -0.08
TCF4-248ENST00000616053 EPSTI1Q96J88 318 aa14.52□□□□□ -0.08
TCF4-248ENST00000616053 CABP2Q9NPB3 220 aa14.52□□□□□ -0.08
TCF4-248ENST00000616053 EXOC5O00471 708 aa14.52□□□□□ -0.08
TCF4-248ENST00000616053 PHAXQ9H814 394 aaKnown RBP14.52□□□□□ -0.08
TCF4-248ENST00000616053 RBM27Q9P2N5 1060 aaKnown RBP14.52□□□□□ -0.08
TCF4-248ENST00000616053 CCDC192P0DO97 292 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 PAFAH1B1P43034 410 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 KIF4BQ2VIQ3 1234 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 WDR63Q8IWG1 891 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 TRMT112Q9UI30 125 aaKnown RBP14.52□□□□□ -0.09
TCF4-248ENST00000616053 CUX2O14529 1486 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 PRKCSHP14314 528 aaPredicted RBP14.52□□□□□ -0.09
TCF4-248ENST00000616053 ZNF569Q5MCW4 686 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 IDEP14735 1019 aa14.52□□□□□ -0.09
TCF4-248ENST00000616053 TCIRG1Q13488 830 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms