RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 ARHGEF10O15013 1369 aa9.47□□□□□ -0.89
MID1-212ENST00000616003 DMTNQ08495 405 aa9.46□□□□□ -0.89
MID1-212ENST00000616003 KIAA2012Q0VF49 1180 aa9.46□□□□□ -0.89
MID1-212ENST00000616003 CUL4AQ13619 759 aa9.46□□□□□ -0.89
MID1-212ENST00000616003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.89
MID1-212ENST00000616003 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.89
MID1-212ENST00000616003 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.89
MID1-212ENST00000616003 LRRC37A3O60309 1634 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 CPS1P31327 1500 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 CCDC96Q2M329 555 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 C16orf71Q8IYS4 520 aaPredicted RBP9.46□□□□□ -0.9
MID1-212ENST00000616003 MPNDQ8N594 471 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 TMX3Q96JJ7 454 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 TSPY26PQ9H489 355 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 FAM13BQ9NYF5 915 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 NRXN3Q9Y4C0 1643 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 RIPOR2Q9Y4F9 1068 aa9.46□□□□□ -0.9
MID1-212ENST00000616003 FAM184AQ8NB25 1140 aa9.45□□□□□ -0.9
MID1-212ENST00000616003 MEIS3Q99687 375 aa9.44□□□□□ -0.9
MID1-212ENST00000616003 RNF39Q9H2S5 420 aa9.44□□□□□ -0.9
MID1-212ENST00000616003 XRN1Q8IZH2 1706 aaKnown RBP9.44□□□□□ -0.9
MID1-212ENST00000616003 TOPAZ1Q8N9V7 1692 aa9.44□□□□□ -0.9
MID1-212ENST00000616003 SALL3Q9BXA9 1300 aa9.44□□□□□ -0.9
MID1-212ENST00000616003 FMN2Q9NZ56 1722 aa9.44□□□□□ -0.9
MID1-212ENST00000616003 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
MID1-212ENST00000616003 ARID4AP29374 1257 aaPredicted RBP9.44□□□□□ -0.9
MID1-212ENST00000616003 PDE1AP54750 535 aa9.44□□□□□ -0.9
MID1-212ENST00000616003 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
MID1-212ENST00000616003 FAM83GA6ND36 823 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 EPB41L2O43491 1005 aaKnown RBP9.43□□□□□ -0.9
MID1-212ENST00000616003 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 ESYT1Q9BSJ8 1104 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 PXDNLA1KZ92 1463 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 A2ML1A8K2U0 1454 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 TECPR2O15040 1411 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 CHL1O00533 1208 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 FBLN1P23142 703 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 NEK4P51957 841 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 UVSSAQ2YD98 709 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 NME9Q86XW9 330 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 MYRIPQ8NFW9 859 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 COG3Q96JB2 828 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
MID1-212ENST00000616003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.43□□□□□ -0.9
MID1-212ENST00000616003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
MID1-212ENST00000616003 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 CRYBG1Q9Y4K1 1723 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 CRB1P82279 1406 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 AOX1Q06278 1338 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 WDR33Q9C0J8 1336 aaKnown RBP9.42□□□□□ -0.9
MID1-212ENST00000616003 NRDCO43847 1150 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 CCT4P50991 539 aaKnown RBP9.42□□□□□ -0.9
MID1-212ENST00000616003 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 RNF214Q8ND24 703 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 OVOS2A0A0J9YW53 1432 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 OVOS2Q6IE36 1432 aa9.42□□□□□ -0.9
MID1-212ENST00000616003 GTF2F1P35269 517 aaKnown RBP eCLIP9.41□□□□□ -0.9
MID1-212ENST00000616003 SSR1P43307 286 aaKnown RBP9.41□□□□□ -0.9
MID1-212ENST00000616003 HMGN5P82970 282 aaKnown RBP9.41□□□□□ -0.9
MID1-212ENST00000616003 MAP2K1Q02750 393 aaPredicted RBP9.41□□□□□ -0.9
MID1-212ENST00000616003 ARMCX6Q7L4S7 300 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 CHAMP1Q96JM3 812 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 RPAP1Q9BWH6 1393 aaPredicted RBP9.41□□□□□ -0.9
MID1-212ENST00000616003 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 KRT24Q2M2I5 525 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 CCDC183Q5T5S1 534 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 NBPF10Q6P3W6 841 aaKnown RBP9.41□□□□□ -0.9
MID1-212ENST00000616003 NBPF5PQ86XG9 351 aaPredicted RBP9.41□□□□□ -0.9
MID1-212ENST00000616003 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
MID1-212ENST00000616003 APBB1O00213 710 aa9.4□□□□□ -0.9
MID1-212ENST00000616003 WASLO00401 505 aaPredicted RBP9.4□□□□□ -0.9
MID1-212ENST00000616003 GOLIM4O00461 696 aa9.4□□□□□ -0.9
MID1-212ENST00000616003 MX1P20591 662 aa9.4□□□□□ -0.9
MID1-212ENST00000616003 BANK1Q8NDB2 785 aa9.4□□□□□ -0.9
MID1-212ENST00000616003 CCDC94Q9BW85 323 aaPredicted RBP9.4□□□□□ -0.9
MID1-212ENST00000616003 RAI14Q9P0K7 980 aa9.4□□□□□ -0.9
MID1-212ENST00000616003 LETM1O95202 739 aaPredicted RBP9.39□□□□□ -0.91
MID1-212ENST00000616003 RAPGEF3O95398 923 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
MID1-212ENST00000616003 LRRCC1Q9C099 1032 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 SPTLC3Q9NUV7 552 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 AGLP35573 1532 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 GNAI2P04899 355 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 CHMLP26374 656 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
MID1-212ENST00000616003 MYBPC2Q14324 1141 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 NOL8Q76FK4 1167 aaKnown RBP9.39□□□□□ -0.91
MID1-212ENST00000616003 ANO2Q9NQ90 1003 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
MID1-212ENST00000616003 TTC21BQ7Z4L5 1316 aa9.38□□□□□ -0.91
MID1-212ENST00000616003 SATB1Q01826 763 aa9.38□□□□□ -0.91
MID1-212ENST00000616003 EIF4A2Q14240 407 aaKnown RBP9.38□□□□□ -0.91
MID1-212ENST00000616003 AEBP1Q8IUX7 1158 aa9.38□□□□□ -0.91
MID1-212ENST00000616003 RIMS1Q86UR5 1692 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms