RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 DDR1Q08345 913 aa14.18□□□□□ -0.14
COL4A1-205ENST00000615732 FKBP8Q14318 412 aa14.18□□□□□ -0.14
COL4A1-205ENST00000615732 WDR43Q15061 677 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL4A1-205ENST00000615732 SCN11AQ9UI33 1791 aa14.18□□□□□ -0.14
COL4A1-205ENST00000615732 USP42Q9H9J4 1324 aaKnown RBP14.17□□□□□ -0.14
COL4A1-205ENST00000615732 KCPQ6ZWJ8 1503 aa14.17□□□□□ -0.14
COL4A1-205ENST00000615732 AKAP4Q5JQC9 854 aa14.17□□□□□ -0.14
COL4A1-205ENST00000615732 C9orf131Q5VYM1 1079 aa14.17□□□□□ -0.14
COL4A1-205ENST00000615732 LGR6Q9HBX8 967 aa14.17□□□□□ -0.14
COL4A1-205ENST00000615732 MRC1P22897 1456 aa14.17□□□□□ -0.14
COL4A1-205ENST00000615732 NEFLP07196 543 aa14.16□□□□□ -0.14
COL4A1-205ENST00000615732 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
COL4A1-205ENST00000615732 DNAJC10Q8IXB1 793 aa14.16□□□□□ -0.14
COL4A1-205ENST00000615732 DNAJC5GQ8N7S2 189 aa14.16□□□□□ -0.14
COL4A1-205ENST00000615732 INTS5Q6P9B9 1019 aaKnown RBP14.15□□□□□ -0.14
COL4A1-205ENST00000615732 SLC52A2Q9HAB3 445 aa14.15□□□□□ -0.14
COL4A1-205ENST00000615732 PIM2Q9P1W9 311 aa14.15□□□□□ -0.14
COL4A1-205ENST00000615732 TNRC6CQ9HCJ0 1690 aaKnown RBP14.14□□□□□ -0.15
COL4A1-205ENST00000615732 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
COL4A1-205ENST00000615732 CHRNA5P30532 468 aa14.14□□□□□ -0.15
COL4A1-205ENST00000615732 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
COL4A1-205ENST00000615732 RBM46Q8TBY0 533 aaKnown RBP14.14□□□□□ -0.15
COL4A1-205ENST00000615732 SBF1O95248 1867 aa14.13□□□□□ -0.15
COL4A1-205ENST00000615732 POLRMTO00411 1230 aaKnown RBP14.13□□□□□ -0.15
COL4A1-205ENST00000615732 HTRA3P83110 453 aa14.13□□□□□ -0.15
COL4A1-205ENST00000615732 DALRD3Q5D0E6 543 aaKnown RBP14.13□□□□□ -0.15
COL4A1-205ENST00000615732 RNF181Q9P0P0 153 aa14.13□□□□□ -0.15
COL4A1-205ENST00000615732 SOS1Q07889 1333 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-205ENST00000615732 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
COL4A1-205ENST00000615732 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-205ENST00000615732 DLEC1Q9Y238 1755 aa14.12□□□□□ -0.15
COL4A1-205ENST00000615732 DIAPH1O60610 1272 aaKnown RBP14.12□□□□□ -0.15
COL4A1-205ENST00000615732 USPL1Q5W0Q7 1092 aa14.12□□□□□ -0.15
COL4A1-205ENST00000615732 ZBTB1Q9Y2K1 713 aa14.12□□□□□ -0.15
COL4A1-205ENST00000615732 AFDNP55196 1824 aaKnown RBP14.12□□□□□ -0.15
COL4A1-205ENST00000615732 VIRMAQ69YN4 1812 aaKnown RBP14.12□□□□□ -0.15
COL4A1-205ENST00000615732 COL15A1P39059 1388 aa14.11□□□□□ -0.15
COL4A1-205ENST00000615732 TM4SF1P30408 202 aa14.11□□□□□ -0.15
COL4A1-205ENST00000615732 C16orf71Q8IYS4 520 aaPredicted RBP14.11□□□□□ -0.15
COL4A1-205ENST00000615732 CFAP53Q96M91 514 aa14.11□□□□□ -0.15
COL4A1-205ENST00000615732 U2SURPO15042 1029 aaKnown RBP14.1□□□□□ -0.15
COL4A1-205ENST00000615732 ZPR1O75312 459 aa14.1□□□□□ -0.15
COL4A1-205ENST00000615732 CYP19A1P11511 503 aaPredicted RBP14.1□□□□□ -0.15
COL4A1-205ENST00000615732 KDM2BQ8NHM5 1336 aa14.1□□□□□ -0.15
COL4A1-205ENST00000615732 RASSF7Q02833 373 aa14.09□□□□□ -0.15
COL4A1-205ENST00000615732 TIAM2Q8IVF5 1701 aa14.09□□□□□ -0.15
COL4A1-205ENST00000615732 UBR2Q8IWV8 1755 aa14.09□□□□□ -0.15
COL4A1-205ENST00000615732 PCNTO95613 3336 aa14.08□□□□□ -0.16
COL4A1-205ENST00000615732 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
COL4A1-205ENST00000615732 FSTL1Q12841 308 aa14.08□□□□□ -0.16
COL4A1-205ENST00000615732 KLRG1Q96E93 195 aa14.08□□□□□ -0.16
COL4A1-205ENST00000615732 RRAGCQ9HB90 399 aa14.08□□□□□ -0.16
COL4A1-205ENST00000615732 ADAMTS8Q9UP79 889 aa14.08□□□□□ -0.16
COL4A1-205ENST00000615732 CARMIL3Q8ND23 1372 aa14.08□□□□□ -0.16
COL4A1-205ENST00000615732 NFIXQ14938 502 aa14.07□□□□□ -0.16
COL4A1-205ENST00000615732 NUDCQ9Y266 331 aa14.07□□□□□ -0.16
COL4A1-205ENST00000615732 PRELPP51888 382 aa14.06□□□□□ -0.16
COL4A1-205ENST00000615732 TTC5Q8N0Z6 440 aa14.06□□□□□ -0.16
COL4A1-205ENST00000615732 JMYQ8N9B5 988 aa14.06□□□□□ -0.16
COL4A1-205ENST00000615732 BCL2L12Q9HB09 334 aa14.06□□□□□ -0.16
COL4A1-205ENST00000615732 NARFQ9UHQ1 456 aa14.06□□□□□ -0.16
COL4A1-205ENST00000615732 SCN7AQ01118 1682 aa14.05□□□□□ -0.16
COL4A1-205ENST00000615732 BICDL1Q6ZP65 573 aa14.05□□□□□ -0.16
COL4A1-205ENST00000615732 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-205ENST00000615732 SALL2Q9Y467 1007 aaPredicted RBP14.05□□□□□ -0.16
COL4A1-205ENST00000615732 TEFQ10587 303 aa14.04□□□□□ -0.16
COL4A1-205ENST00000615732 VSIG10Q8N0Z9 540 aa14.04□□□□□ -0.16
COL4A1-205ENST00000615732 ZNF496Q96IT1 587 aaPredicted RBP14.04□□□□□ -0.16
COL4A1-205ENST00000615732 ZC3H4Q9UPT8 1303 aaKnown RBP14.04□□□□□ -0.16
COL4A1-205ENST00000615732 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
COL4A1-205ENST00000615732 ANKRD31Q8N7Z5 1873 aa14.04□□□□□ -0.16
COL4A1-205ENST00000615732 SERPINB2P05120 415 aa14.03□□□□□ -0.16
COL4A1-205ENST00000615732 COL13A1Q5TAT6 717 aaPredicted RBP14.03□□□□□ -0.16
COL4A1-205ENST00000615732 SMC1BQ8NDV3 1235 aa14.03□□□□□ -0.16
COL4A1-205ENST00000615732 IL17REQ8NFR9 667 aa14.03□□□□□ -0.16
COL4A1-205ENST00000615732 GAS2L2Q8NHY3 880 aa14.03□□□□□ -0.16
COL4A1-205ENST00000615732 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
COL4A1-205ENST00000615732 HEG1Q9ULI3 1381 aa14.03□□□□□ -0.16
COL4A1-205ENST00000615732 GNAT3A8MTJ3 354 aa14.02□□□□□ -0.17
COL4A1-205ENST00000615732 LMNB1P20700 586 aa14.02□□□□□ -0.17
COL4A1-205ENST00000615732 PRKAR2BP31323 418 aa14.02□□□□□ -0.17
COL4A1-205ENST00000615732 CCDC24Q8N4L8 307 aa14.02□□□□□ -0.17
COL4A1-205ENST00000615732 CCDC88AQ3V6T2 1871 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 GLTPD2A6NH11 291 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 NFKBIEO00221 500 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 KCNQ3O43525 872 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 STARD3NLO95772 234 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 EIF5P55010 431 aaKnown RBP14.01□□□□□ -0.17
COL4A1-205ENST00000615732 ZNF790Q6PG37 636 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 C2CD5Q86YS7 1000 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 TTLL6Q8N841 843 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 PHACTR3Q96KR7 559 aa14.01□□□□□ -0.17
COL4A1-205ENST00000615732 SIPA1L3O60292 1781 aaPredicted RBP14.01□□□□□ -0.17
COL4A1-205ENST00000615732 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
COL4A1-205ENST00000615732 TBC1D9BQ66K14 1250 aa14□□□□□ -0.17
COL4A1-205ENST00000615732 RSPH6AQ9H0K4 717 aa14□□□□□ -0.17
COL4A1-205ENST00000615732 TBC1D2BQ9UPU7 963 aa14□□□□□ -0.17
COL4A1-205ENST00000615732 CEMIPQ8WUJ3 1361 aa13.99□□□□□ -0.17
COL4A1-205ENST00000615732 A1BGP04217 495 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms