RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ERCC6LQ2NKX8 1250 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 ANO6Q4KMQ2 910 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 TNMDQ9H2S6 317 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 LRRFIP2Q9Y608 721 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 MROH2AA6NES4 1674 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 MAP3K4Q9Y6R4 1608 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 VWDEQ8N2E2 1590 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 CACTINQ8WUQ7 758 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 ERO1AQ96HE7 468 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 RIMS2Q9UQ26 1411 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 DEPDC5O75140 1603 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 TPM4P67936 248 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 SYT10Q6XYQ8 523 aa12.29□□□□□ -0.44
TNFAIP3-208ENST00000615468 LOC102724159A0A0B4J2E5 919 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 TRIM66O15016 1216 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 TYRO3Q06418 890 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 PWP2Q15269 919 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 FERMT3Q86UX7 667 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 NME9Q86XW9 330 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 GOLGA6L1Q8N7Z2 621 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 SKILP12757 684 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 CUL4AQ13619 759 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 SYT1P21579 422 aa12.28□□□□□ -0.44
TNFAIP3-208ENST00000615468 TWISTNBQ3B726 338 aaPredicted RBP12.27□□□□□ -0.44
TNFAIP3-208ENST00000615468 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.44
TNFAIP3-208ENST00000615468 TMCO3Q6UWJ1 677 aa12.27□□□□□ -0.44
TNFAIP3-208ENST00000615468 ARGLU1Q9NWB6 273 aaPredicted RBP12.27□□□□□ -0.44
TNFAIP3-208ENST00000615468 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.44
TNFAIP3-208ENST00000615468 GYS2P54840 703 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 HOMER1Q86YM7 354 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 TXLNBQ8N3L3 684 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 FBXW7Q969H0 707 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 MYOM2P54296 1465 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 USP27XA6NNY8 438 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 FYB1O15117 783 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 LTKP29376 864 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.45
TNFAIP3-208ENST00000615468 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 YTHDC2Q9H6S0 1430 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 F13A1P00488 732 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 ZNF165P49910 485 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 ZNF75DP51815 510 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 ARHGAP29Q52LW3 1261 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 EFCC1Q9HA90 598 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 CBX8Q9HC52 389 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 DIP2BQ9P265 1576 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 BECN2A8MW95 431 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 VAMP4O75379 141 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 ADGRB3O60242 1522 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 TNRQ92752 1358 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 GNL2Q13823 731 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 EMILIN1Q9Y6C2 1016 aa12.26□□□□□ -0.45
TNFAIP3-208ENST00000615468 PRKAR2BP31323 418 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 MNS1Q8NEH6 495 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 BICD2Q8TD16 824 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 UBXN4Q92575 508 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 ESYT1Q9BSJ8 1104 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 DNAJC25Q9H1X3 360 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 CCDC171Q6TFL3 1326 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 MYO1CO00159 1063 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 HMMRO75330 724 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 ZSCAN26Q16670 478 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 CREBRFQ8IUR6 639 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 IL16Q14005 1332 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 ZCCHC17Q9NP64 241 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 METP08581 1390 aa12.25□□□□□ -0.45
TNFAIP3-208ENST00000615468 LMAN1P49257 510 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 CCDC83Q8IWF9 413 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 DACT1Q9NYF0 836 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 EXOC6BQ9Y2D4 811 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 DHX16O60231 1041 aaKnown RBP12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 PDE1AP54750 535 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 IQSEC2Q5JU85 1478 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 DRC1Q96MC2 740 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 LMTK2Q8IWU2 1503 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 RNF20Q5VTR2 975 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 FAM173BQ6P4H8 233 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
TNFAIP3-208ENST00000615468 CLCN6P51797 869 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 ANKRD44Q8N8A2 993 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 CCDC34Q96HJ3 373 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 TFIP11Q9UBB9 837 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 MRVI1Q9Y6F6 885 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 PNMA6AP0CW24 399 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 ZNF428Q96B54 188 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 ZNF446Q9NWS9 450 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms