RNA–Protein interactions for RNA: ENST00000615088.1

AL109954.3-201, humanhuman

BASIC

Gene AL109954.3, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.3-201ENST00000615088 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
AL109954.3-201ENST00000615088 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
AL109954.3-201ENST00000615088 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
AL109954.3-201ENST00000615088 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
AL109954.3-201ENST00000615088 CHD4Q14839 1912 aa16.92■□□□□ 0.3
AL109954.3-201ENST00000615088 A0A087WZG4 1122 aa16.91■□□□□ 0.3
AL109954.3-201ENST00000615088 MCM10Q7L590 875 aa16.91■□□□□ 0.3
AL109954.3-201ENST00000615088 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
AL109954.3-201ENST00000615088 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
AL109954.3-201ENST00000615088 PXDNLA1KZ92 1463 aa16.9■□□□□ 0.3
AL109954.3-201ENST00000615088 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
AL109954.3-201ENST00000615088 DDR1Q08345 913 aa16.89■□□□□ 0.29
AL109954.3-201ENST00000615088 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
AL109954.3-201ENST00000615088 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
AL109954.3-201ENST00000615088 KCNQ3O43525 872 aa16.88■□□□□ 0.29
AL109954.3-201ENST00000615088 TM4SF1P30408 202 aa16.88■□□□□ 0.29
AL109954.3-201ENST00000615088 DCTN1Q14203 1278 aa16.88■□□□□ 0.29
AL109954.3-201ENST00000615088 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
AL109954.3-201ENST00000615088 POLRMTO00411 1230 aaKnown RBP16.87■□□□□ 0.29
AL109954.3-201ENST00000615088 DPEP1P16444 411 aa16.87■□□□□ 0.29
AL109954.3-201ENST00000615088 EIF5P55010 431 aaKnown RBP16.87■□□□□ 0.29
AL109954.3-201ENST00000615088 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
AL109954.3-201ENST00000615088 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 NFIXQ14938 502 aa16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 PLEKHF1Q96S99 279 aa16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 MYBBP1AQ9BQG0 1328 aaKnown RBP16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 KIF13BQ9NQT8 1826 aa16.86■□□□□ 0.29
AL109954.3-201ENST00000615088 A1BGP04217 495 aa16.85■□□□□ 0.29
AL109954.3-201ENST00000615088 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
AL109954.3-201ENST00000615088 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
AL109954.3-201ENST00000615088 SERPINB2P05120 415 aa16.83■□□□□ 0.28
AL109954.3-201ENST00000615088 BICDL1Q6ZP65 573 aa16.83■□□□□ 0.28
AL109954.3-201ENST00000615088 TBC1D2BQ9UPU7 963 aa16.83■□□□□ 0.28
AL109954.3-201ENST00000615088 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
AL109954.3-201ENST00000615088 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
AL109954.3-201ENST00000615088 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
AL109954.3-201ENST00000615088 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
AL109954.3-201ENST00000615088 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
AL109954.3-201ENST00000615088 ARHGAP27Q6ZUM4 889 aa16.81■□□□□ 0.28
AL109954.3-201ENST00000615088 DZIP3Q86Y13 1208 aaKnown RBP16.81■□□□□ 0.28
AL109954.3-201ENST00000615088 N4BP2Q86UW6 1770 aaPredicted RBP16.81■□□□□ 0.28
AL109954.3-201ENST00000615088 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
AL109954.3-201ENST00000615088 PRAMEF22A3QJZ6 481 aa16.8■□□□□ 0.28
AL109954.3-201ENST00000615088 KCNA3P22001 575 aa16.8■□□□□ 0.28
AL109954.3-201ENST00000615088 CHRNA5P30532 468 aa16.8■□□□□ 0.28
AL109954.3-201ENST00000615088 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
AL109954.3-201ENST00000615088 TBC1D9BQ66K14 1250 aa16.8■□□□□ 0.28
AL109954.3-201ENST00000615088 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
AL109954.3-201ENST00000615088 NPHP1O15259 732 aa16.79■□□□□ 0.28
AL109954.3-201ENST00000615088 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
AL109954.3-201ENST00000615088 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 CAMTA2O94983 1202 aa16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 RIPK4P57078 832 aa16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 THUMPD2Q9BTF0 503 aaKnown RBP16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 GPBP1L1Q9HC44 474 aaPredicted RBP16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
AL109954.3-201ENST00000615088 ADCY9O60503 1353 aa16.77■□□□□ 0.28
AL109954.3-201ENST00000615088 SETDB2Q96T68 719 aa16.77■□□□□ 0.28
AL109954.3-201ENST00000615088 H0YIN7 160 aa16.76■□□□□ 0.27
AL109954.3-201ENST00000615088 C1QTNF8P60827 252 aa16.76■□□□□ 0.27
AL109954.3-201ENST00000615088 C2CD5Q86YS7 1000 aa16.76■□□□□ 0.27
AL109954.3-201ENST00000615088 PDZRN3Q9UPQ7 1066 aa16.76■□□□□ 0.27
AL109954.3-201ENST00000615088 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
AL109954.3-201ENST00000615088 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
AL109954.3-201ENST00000615088 CLEC4GQ6UXB4 293 aa16.75■□□□□ 0.27
AL109954.3-201ENST00000615088 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
AL109954.3-201ENST00000615088 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
AL109954.3-201ENST00000615088 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
AL109954.3-201ENST00000615088 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
AL109954.3-201ENST00000615088 PDE6BP35913 854 aa16.74■□□□□ 0.27
AL109954.3-201ENST00000615088 ST5P78524 1137 aa16.74■□□□□ 0.27
AL109954.3-201ENST00000615088 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
AL109954.3-201ENST00000615088 RUNDC1Q96C34 613 aa16.74■□□□□ 0.27
AL109954.3-201ENST00000615088 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
AL109954.3-201ENST00000615088 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
AL109954.3-201ENST00000615088 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 RGL2O15211 777 aa16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 PRR5LQ6MZQ0 368 aa16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 NBPF10Q6P3W6 841 aaKnown RBP16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 NBPF15Q8N660 670 aa16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 TTLL6Q8N841 843 aa16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
AL109954.3-201ENST00000615088 BRCA1P38398 1863 aaKnown RBP16.72■□□□□ 0.27
AL109954.3-201ENST00000615088 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
AL109954.3-201ENST00000615088 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
AL109954.3-201ENST00000615088 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
AL109954.3-201ENST00000615088 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
AL109954.3-201ENST00000615088 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
AL109954.3-201ENST00000615088 NBPF5PQ86XG9 351 aaPredicted RBP16.71■□□□□ 0.27
AL109954.3-201ENST00000615088 NGEFQ8N5V2 710 aa16.71■□□□□ 0.27
AL109954.3-201ENST00000615088 ZNF622Q969S3 477 aaKnown RBP eCLIP16.71■□□□□ 0.27
AL109954.3-201ENST00000615088 LAMB4A4D0S4 1761 aa16.71■□□□□ 0.27
AL109954.3-201ENST00000615088 BCORQ6W2J9 1755 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms