RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-218ENST00000614502 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
PDLIM2-218ENST00000614502 SIPA1L3O60292 1781 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-218ENST00000614502 SLC39A6Q13433 755 aa16.27■□□□□ 0.2
PDLIM2-218ENST00000614502 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
PDLIM2-218ENST00000614502 NMRK2Q9NPI5 230 aa16.27■□□□□ 0.2
PDLIM2-218ENST00000614502 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
PDLIM2-218ENST00000614502 CYP19A1P11511 503 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-218ENST00000614502 TEX13AQ9BXU3 409 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-218ENST00000614502 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-218ENST00000614502 STARD3NLO95772 234 aa16.25■□□□□ 0.19
PDLIM2-218ENST00000614502 CHRNA5P30532 468 aa16.25■□□□□ 0.19
PDLIM2-218ENST00000614502 C9orf131Q5VYM1 1079 aa16.24■□□□□ 0.19
PDLIM2-218ENST00000614502 NARFQ9UHQ1 456 aa16.24■□□□□ 0.19
PDLIM2-218ENST00000614502 COL15A1P39059 1388 aa16.24■□□□□ 0.19
PDLIM2-218ENST00000614502 A0A087WZG4 1122 aa16.23■□□□□ 0.19
PDLIM2-218ENST00000614502 POLRMTO00411 1230 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-218ENST00000614502 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
PDLIM2-218ENST00000614502 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
PDLIM2-218ENST00000614502 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 TM4SF1P30408 202 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 ZNF790Q6PG37 636 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 DLEC1Q9Y238 1755 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
PDLIM2-218ENST00000614502 TOMM70O94826 608 aa16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 WDR90Q96KV7 1748 aa16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
PDLIM2-218ENST00000614502 NEFMP07197 916 aa16.2■□□□□ 0.18
PDLIM2-218ENST00000614502 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-218ENST00000614502 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-218ENST00000614502 APLP1P51693 650 aa16.19■□□□□ 0.18
PDLIM2-218ENST00000614502 NFIXQ14938 502 aa16.19■□□□□ 0.18
PDLIM2-218ENST00000614502 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
PDLIM2-218ENST00000614502 RNF181Q9P0P0 153 aa16.19■□□□□ 0.18
PDLIM2-218ENST00000614502 BTBD11A6QL63 1104 aa16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 HTRA3P83110 453 aa16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 DNAJC5GQ8N7S2 189 aa16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-218ENST00000614502 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-218ENST00000614502 RASSF7Q02833 373 aa16.17■□□□□ 0.18
PDLIM2-218ENST00000614502 PHACTR3Q96KR7 559 aa16.17■□□□□ 0.18
PDLIM2-218ENST00000614502 CARMIL3Q8ND23 1372 aa16.16■□□□□ 0.18
PDLIM2-218ENST00000614502 SCN7AQ01118 1682 aa16.16■□□□□ 0.18
PDLIM2-218ENST00000614502 PNNQ9H307 717 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-218ENST00000614502 PDZRN3Q9UPQ7 1066 aa16.16■□□□□ 0.18
PDLIM2-218ENST00000614502 SERPINB2P05120 415 aa16.15■□□□□ 0.18
PDLIM2-218ENST00000614502 PRELPP51888 382 aa16.15■□□□□ 0.18
PDLIM2-218ENST00000614502 TIAM2Q8IVF5 1701 aa16.15■□□□□ 0.18
PDLIM2-218ENST00000614502 RBM46Q8TBY0 533 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-218ENST00000614502 DLG5Q8TDM6 1919 aa16.15■□□□□ 0.18
PDLIM2-218ENST00000614502 RRAGCQ9HB90 399 aa16.14■□□□□ 0.17
PDLIM2-218ENST00000614502 COL11A2P13942 1736 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-218ENST00000614502 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-218ENST00000614502 CACNA1SQ13698 1873 aa16.13■□□□□ 0.17
PDLIM2-218ENST00000614502 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
PDLIM2-218ENST00000614502 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-218ENST00000614502 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
PDLIM2-218ENST00000614502 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-218ENST00000614502 KDM2BQ8NHM5 1336 aa16.12■□□□□ 0.17
PDLIM2-218ENST00000614502 H0YIN7 160 aa16.11■□□□□ 0.17
PDLIM2-218ENST00000614502 PCNTO95613 3336 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 A1BGP04217 495 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 PDE6BP35913 854 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 MCM10Q7L590 875 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 TTLL6Q8N841 843 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 PNISRQ8TF01 805 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 FER1L6Q2WGJ9 1857 aa16.1■□□□□ 0.17
PDLIM2-218ENST00000614502 DICER1Q9UPY3 1922 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 LAMB4A4D0S4 1761 aa16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 NPHP1O15259 732 aa16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 DZIP3Q86Y13 1208 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 SETDB2Q96T68 719 aa16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 ZC3H4Q9UPT8 1303 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-218ENST00000614502 NFKBIEO00221 500 aa16.08■□□□□ 0.16
PDLIM2-218ENST00000614502 KCNQ3O43525 872 aa16.08■□□□□ 0.16
PDLIM2-218ENST00000614502 FSTL1Q12841 308 aa16.08■□□□□ 0.16
PDLIM2-218ENST00000614502 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
PDLIM2-218ENST00000614502 BRIP1Q9BX63 1249 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms