RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 TSPYL1Q9H0U9 437 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 DONSONQ9NYP3 566 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 ANKRD33BA6NCL7 494 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 TDO2P48775 406 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 HIC1Q14526 733 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 CDC37Q16543 378 aaPredicted RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 TXNDC2Q86VQ3 553 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 LSM14AQ8ND56 463 aaKnown RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 SCYL1Q96KG9 808 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 SPOCK3Q9BQ16 436 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 BRINP2Q9C0B6 783 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 FAM13BQ9NYF5 915 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 PNMA2Q9UL42 364 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 SEMA3EO15041 775 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 U2SURPO15042 1029 aaKnown RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 KIF1CO43896 1103 aaKnown RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 ITGAEP38570 1179 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 GET4Q7L5D6 327 aaPredicted RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 SULF1Q8IWU6 871 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 PMM1Q92871 262 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 FAN1Q9Y2M0 1017 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 WASF2Q9Y6W5 498 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 NCAPD3P42695 1498 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 RAD54L2Q9Y4B4 1467 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 PAX3P23760 479 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 MMP16P51512 607 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 ZRSR2Q15696 482 aaKnown RBP3.74□□□□□ -1.81
CBWD3-209ENST00000614377 PROCA1Q8NCQ7 364 aaPredicted RBP3.74□□□□□ -1.81
CBWD3-209ENST00000614377 SLX1AQ9BQ83 275 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 IRF2BPLQ9H1B7 796 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 RANBP17Q9H2T7 1088 aaKnown RBP3.74□□□□□ -1.81
CBWD3-209ENST00000614377 ARHGEF10LQ9HCE6 1279 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 GNL3LQ9NVN8 582 aaKnown RBP3.74□□□□□ -1.81
CBWD3-209ENST00000614377 PPP1R1BQ9UD71 204 aaPredicted RBP3.74□□□□□ -1.81
CBWD3-209ENST00000614377 hCG_2014768A0A024R1R8 64 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 SOBPA7XYQ1 873 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 FAM163BP0C2L3 166 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 FAM200BP0CF97 657 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 Q3C1V9 767 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 ZKSCAN2Q63HK3 967 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 DPH6Q7L8W6 267 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 EHBP1Q8NDI1 1231 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 SMC4Q9NTJ3 1288 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 KLHL42Q9P2K6 505 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 ANAPC4Q9UJX5 808 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 SBNO2Q9Y2G9 1366 aa3.74□□□□□ -1.81
CBWD3-209ENST00000614377 CTAGE5O15320 804 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 KIF4AO95239 1232 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 PARNO95453 639 aaKnown RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 IBSPP21815 317 aaPredicted RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 VAMP1P23763 118 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 CCT2P78371 535 aaKnown RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 LARGE2Q8N3Y3 721 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 KCNB2Q92953 911 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 CALR3Q96L12 384 aaKnown RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 ZFP42Q96MM3 310 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 USB1Q9BQ65 265 aaKnown RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 MED4Q9NPJ6 270 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 DXOO77932 396 aaKnown RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 CSB-PGBD3P0DP91 1061 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 NOP2P46087 812 aaKnown RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 WNT7BP56706 349 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 XPCQ01831 940 aaPredicted RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 POU5F1Q01860 360 aaKnown RBP3.73□□□□□ -1.81
CBWD3-209ENST00000614377 MLECQ14165 292 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 NAALADL2Q58DX5 795 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 PCGF5Q86SE9 256 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 NPAS3Q8IXF0 933 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 HLA-CQ95604 372 aa3.73□□□□□ -1.81
CBWD3-209ENST00000614377 TLDC2A0PJX2 215 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 ZNF853P0CG23 659 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 PAX7P23759 505 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 GYS2P54840 703 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 NEXNQ0ZGT2 675 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 PTPROQ16827 1216 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 TBC1D10BQ4KMP7 808 aaPredicted RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 HDGFL1Q5TGJ6 251 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 JMYQ8N9B5 988 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 PHOX2BQ99453 314 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 ABCF2Q9UG63 623 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 FBXO9Q9UK97 447 aaPredicted RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 SCRIBQ14160 1630 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 GNPATO15228 680 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 WDHD1O75717 1129 aaPredicted RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 NEFHP12036 1026 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 SKILP12757 684 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 ZNF16P17020 682 aaPredicted RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 BDNFP23560 247 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 PSME1Q06323 249 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 GJC2Q5T442 439 aaPredicted RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 ARPC5LQ9BPX5 153 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 CUEDC1Q9NWM3 386 aaPredicted RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 CHPF2Q9P2E5 772 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 PPP1R12AO14974 1030 aaPredicted RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 INHBEP58166 350 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 SF3B2Q13435 895 aaKnown RBP3.72□□□□□ -1.81
CBWD3-209ENST00000614377 ZBED9Q6R2W3 1325 aa3.72□□□□□ -1.81
CBWD3-209ENST00000614377 ZCRB1Q8TBF4 217 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms